Os09g0465600

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Revision as of 07:28, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0465600| Description = Similar to Glucose-6-phosphate isomerase-like protein (Fragment)| Version = NM_001069950.1 GI:115479642 GeneID:434731...")
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Gene Name

Os09g0465600

Description

Similar to Glucose-6-phosphate isomerase-like protein (Fragment)

Version

NM_001069950.1 GI:115479642 GeneID:4347311

Length

5113 bp

Definition

Oryza sativa Japonica Group Os09g0465600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18302220..18307332

Sequence Coding Region

18302493..18302633,18302745..18302811,18303384..18303462,18303561..18303717,18303800..18303938
,18304030..18304082,18304512..18304619,18304707..18304775,18304867..18304932
,18305013..18305156,18305734..18305817,18305901..18305999,18306115..18306237
,18306645..18307193

Expression

GEO Profiles:Os09g0465600

Genome Context

<gbrowseImage1> name=NC_008402:18302220..18307332 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:18302220..18307332 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccatctccggcgcggcggcgcctccgtcctcgtcggcggcgtgcaggctgcggctgcggcggcagctcctcctccgcccctcccacctccgcctccgcgccccccactccatcgcggacctctcccgctcctcctcgtcctcgtcggagcagcagccctcctctaccccggcggcgccgctcgcctccaggccggggcagaacggcagcacccgcggcgcggtggagaaggacccgatcaagctgtgggagaggtacgtggagtggctgtaccagcacaaggagctcggcctgttcgtggacgtgagccggatggggttcacggaggagttcctccgccggatggagccgcggatgcagcgcgccttcgcggcgatgcgggagctcgagaagggggccatcgccaaccccgacgagggccgcatggttggccattactggctccgcgacccaggcctcgcccccaactccttcctccgcaccaagatcgagaccaccctcgaccgcatcctcgccttctcccaagacgtcgtctccggcaagattaaacctccgtcatctccagctggccgatttactcaaatactctcaataggaattggaggatcagctttggggcctcaatttgtttcagaggcacttgcacctgataaccctccattgaagatacgatttattgacaacactgatcctgctggaatcgaccatcaaattgctcaactaggaccagagcttgcatctactcttgtaattgttatttctaagagtggaggcacacctgaaacccggaatggtctgcttgaagtgcaaaaagccttccgagatgctgggctggatttctcgaaacagggagttgcagttactcaagaaaattctctgttagacaacactgccagaatagagggatggttagctagatttcccatgtttgactgggttggtggaagaacatcagaaatgtcagctgtcggattgcttccagctgcattacagggtatcgatatcaaagaaatgttagttggcgcagcactaatggatgaggaaaccaggaatactgtggttaaggaaaatccagcagccttacttgctttgtgctggtattgggcatcggaaggaataggaaataaggatatggttgtacttccgtacaaggatagtttgctacttttgagtagatatttgcaacagcttgtcatggaatctcttgggaaagaatttgaccttgatggcaatcgggttaatcaaggtctaactgtgtatggcaacaaaggaagcaccgatcagcatgcctacattcagcagctgagagaaggtgtacacaacttcttcgttacttttattgaggttttgcgtgataggcctcctggtcatgattgggagcttgaacctggagttacatgtggtgactatttgttcgggatgttgcagggaacccgttctgctctttattctaatgaccgagaatccatctccgttactgtgcaagaagttactcctagggctgttggagcgctggttgctctatatgaacgtgctgtggggatttatgcttctttagtaaatatcaatgcctatcatcagcctggtgttgaggctgggaaaaaggcagcaggtgaagtgttggcacttcagaagagggtgctgactgttctgaatgaggccagctgcaaggatcctgccgagccgttgacgctggatcaaatagcagagcgctgtcattgccctgaagatattgagatgatatacaaaataatccagcacatggcagcaaatgatagagcgctcatagcagaaggcagctgcggttctcctcgaagcatcaaggtttaccttggagaatgcaatgtagatgaggatatgcttgctgcttag</cdnaseq>

Protein Sequence

<aaseq>MASISGAAAPPSSSAACRLRLRRQLLLRPSHLRLRAPHSIADLS RSSSSSSEQQPSSTPAAPLASRPGQNGSTRGAVEKDPIKLWERYVEWLYQHKELGLFV DVSRMGFTEEFLRRMEPRMQRAFAAMRELEKGAIANPDEGRMVGHYWLRDPGLAPNSF LRTKIETTLDRILAFSQDVVSGKIKPPSSPAGRFTQILSIGIGGSALGPQFVSEALAP DNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFR DAGLDFSKQGVAVTQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQG IDIKEMLVGAALMDEETRNTVVKENPAALLALCWYWASEGIGNKDMVVLPYKDSLLLL SRYLQQLVMESLGKEFDLDGNRVNQGLTVYGNKGSTDQHAYIQQLREGVHNFFVTFIE VLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYSNDRESISVTVQEVTPRAVGALV ALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLTVLNEASCKDPAEPLT LDQIAERCHCPEDIEMIYKIIQHMAANDRALIAEGSCGSPRSIKVYLGECNVDEDMLA A</aaseq>

Gene Sequence

<dnaseqindica>4700..4840#4522..4588#3871..3949#3616..3772#3395..3533#3251..3303#2714..2821#2558..2626#2401..2466#2177..2320#1516..1599#1334..1432#1096..1218#140..688#ctcttcttcgtggactccaagacgaaaccatcgcttcccctcctctctcgctctcgccggagttagatgcgcgtgagctcgtgtaggagagcgggagcgagcactaccgggtgagactccggcggcggcggcggccgcgatggcgtccatctccggcgcggcggcgcctccgtcctcgtcggcggcgtgcaggctgcggctgcggcggcagctcctcctccgcccctcccacctccgcctccgcgccccccactccatcgcggacctctcccgctcctcctcgtcctcgtcggagcagcagccctcctctaccccggcggcgccgctcgcctccaggccggggcagaacggcagcacccgcggcgcggtggagaaggacccgatcaagctgtgggagaggtacgtggagtggctgtaccagcacaaggagctcggcctgttcgtggacgtgagccggatggggttcacggaggagttcctccgccggatggagccgcggatgcagcgcgccttcgcggcgatgcgggagctcgagaagggggccatcgccaaccccgacgagggccgcatggttggccattactggctccgcgacccaggcctcgcccccaactccttcctccgcaccaagatcgagaccaccctcgaccgcatcctcgccttctcccaagacgtcgtctccggcaaggtgattgcagaagtttccatttgctcgagatgctaaaaattgttgctgttaggagtctggactcgctgaaattagatgattttcacgtgttactaatttgatatctctagttctgctactgctactataaaaaaagcttaatttctggcggctaatagcaaataagcaaacgaaaccctattagcatattgtggtaaaattagtgcggttttaagcttagtaagctgtgtgctcaagggtgaagaaaaggagccacctatgttttggtgattaccatgaaatgggtactggggaatgtgcattgttcaatagatagacgccagtcgagttttgcttatgcaggctcttgctacttcttttttgatcttgagaaacactattaacaaagtgatttggtgcaaatgtagattaaacctccgtcatctccagctggccgatttactcaaatactctcaataggaattggaggatcagctttggggcctcaatttgtttcagaggcacttgcacctgataaccctccattgaaggtgcgcccctacttttatatccatgcaatgtgcttcgatctcatttgcccctttgtagattttggtgtttctcatgtagctataacctcaccttttgttctgtttgatgtctcagatacgatttattgacaacactgatcctgctggaatcgaccatcaaattgctcaactaggaccagagcttgcatctactcttgtaattgttatttctaaggttgatatcacgcttgtttttccttattcaccctctcttctccctgcttcttttgcaaattttatgtttgtctatacttgcagagtggaggcacacctgaaacccggaatggtctgcttgaagtgcaaaaagccttccgagatgctgggctggatttctcgaaacaggtttttacctcaggctcttttacttcttgtatgtcttttatcaacaaaataggaagtgcaacatttattttaagccaatttagactgtaatcgatttgtactagtcccgtttcttgatttatatactgatggtattaagataaacactgaaacaatattgtttctcttgttttacaagcaaaccatcagtgttcataagtaggtcatgtggtgtgggctgttctggatccatttgtgtgacatgatattaacgtgcattttgtaactcaagatataaagatcattatattatactccctccgtattttaatgtatgacgccgttgacttttcgaccaaagtttgaccattcgttttattcaaaatttttgtgcaaatataaaatcatgcttaaagaacatttgatgatgaatcaagtcacattaaaataaatgataattacataaattttttgaataagacaaatggtcaaacgttagacaaaaagtcaacgacgtcatacattaaaatatggaggtagtactatatatgactggtgtggtacataccattatgtgacagcataaactgctatgcagggagttgcagttactcaagaaaattctctgttagacaacactgccagaatagagggatggttagctagatttcccatgtttgactgggttggtggaagaacatcagaaatgtcagctgtcggattgcttccagctgcattacaggtcagtgctgctccgttctcctatattgctgagaactgaactttcattagctctcagattaacacgagtttgcttgccagggtatcgatatcaaagaaatgttagttggcgcagcactaatggatgaggaaaccaggaatactgtggtatgatgttataagaatacatacagtttgtagtttagtgatacaatggactgttgaggatatatcaagatgttgctatccactcattcaggttaaggaaaatccagcagccttacttgctttgtgctggtattgggcatcggaaggaataggaaataaggttagcattgttgattacttctgtttaagtttttttgtcattgttttgtgcattatttttatgttttgagttgaacatatgtttcaggatatggttgtacttccgtacaaggatagtttgctacttttgagtagatatttgcaacagcttgtcatggaatctcttgggaaagaatttgaccttgatggcaatcgggtacacattcttccgttttattctcactgtaactgatgttactaaggccctgtttgattcagcttaggattattataatctagattattagaagtaagctaaaacaaacaagtagattattatgctagattattataatctataagccagattactataatccaataatctcctctagaggagctttttccagattattaagtgggtaaagacccactacctttagatgcctctaataatccagagaaacaaacaactcgtagattattttatatcagcttattataatccagcttagagtaatctgatttaataatctagattacaataatcttaagctgaaacaaacagagcctaaacttaactagttaccaataattaaattatgtctccaatagtttgctgacaaacagaaatttttaatggcaggttaatcaaggtctaactgtgtatggcaacaaaggaagcaccgatcagcatgcgtaagtttttttttcctgtttttctgcagtacttgcttaagagtctgtagttaaaagtgcaaaaatctaatggtattatatccggttacagctacattcagcagctgagagaaggtgtacacaacttcttcgttacttttattgaggttttgcgtgataggcctcctggtcatgattgggagcttgaacctggagttacatgtggtgactatttgttcgggatgttgcaggttgatattcagctttttaagatacagaactatgacatttttttctatgaatgcaatgacagaggaaagaaatattttgcagggaacccgttctgctctttattctaatgaccgagaatccatctccgttactgtgcaagaagttactcctagggctgttggagcgctggttgctctatatgaacgtgctgtggggatttatgcttctttagtaaatatcaatgcctatcatcagcctggtacattcctcaaacaagctaaagttgactaggattcttttgttgcattatgattcttatgattatgatatgatgtatttgtgctatgcgctgtacaggtgttgaggctgggaaaaaggcagcaggtgaagtgttggcacttcagaagagggtgctgactgttctgaatgaggccaggcatgttatatctttatttacatttgtatattatttatcgtatattatttatctacagatattgatttgtgcacagtagtttgaggcatgcatatcttttaggttttagcacttgaaaaacagatgttcctacattactatatctttacctagagaatacttttctggaatgacttgcactctgattaatggcctctagacagcttcagatgccaaaatattggagatgtcataaattctttgggaaaaactcttctgtgggttattattgggaatcagagaacctacctcatgtggctgcaaattcaccagatagcatgaattctatttgaacagttagctgtcttggacagtttaaacctaattactgacaaagggaagcctttgtgtaacaactggaacatatcttgctcatatgtgtgaaattccagcacatcgcttaaacttgttttatcagtgtattaacctaaagacatgaaactctcggttttgcgtttactccccgatggggtatctcttacaattctaagtggttcctgaatttctgctgattacttgctgctgtctttcagctgcaaggatcctgccgagccgttgacgctggatcaaatagcagagcgctgtcattgccctgaagatgtaatattcattcctgactcaacttctgttactatctggattcattgcgaactgcaaaacagatttaccctttcatattaataactcgtgctattccatttgttgcatcagattgagatgatatacaaaataatccagcacatggcagcaaatgatagagcgctcatagcagaaggcagctgcggttctcctcgaagcatcaaggtttaccttggagaatgcaatgtagatgaggatatgcttgctgcttagaatttccggtcttggatgtgtgtaaaattgggtgggctttggaataaaaggaacgacgcctatggctgggccatgcattgttccaatgagcaattagttttttattcggttgcaaatggcatgactgccgcaaccctgtactttagattatagattttctgttttaattacagacaaataatgatcttgtcatcccgtgccctttttcaacttccaaccaagaagatggtacaattatttccaatcaaacgagtggaaagttaattccagcac</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0465600, RefSeq:Os09g0465600