Os09g0466200

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Revision as of 07:28, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0466200| Description = Conserved hypothetical protein| Version = NM_001188946.1 GI:297727022 GeneID:9270844| Length = 5701 bp| Definition ...")
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Gene Name

Os09g0466200

Description

Conserved hypothetical protein

Version

NM_001188946.1 GI:297727022 GeneID:9270844

Length

5701 bp

Definition

Oryza sativa Japonica Group Os09g0466200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18336740..18342440

Sequence Coding Region

18336740..18336799,18337394..18337464,18338436..18338978,18342404..18342440

Expression

GEO Profiles:Os09g0466200

Genome Context

<gbrowseImage1> name=NC_008402:18336740..18342440 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:18336740..18342440 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctcgtggggcgtacttgcatccacggatggaaggcgccgccgaccctaccggccgtcgccttccctgccagccgtcgtcgcccctgcaggccgccatcgccttccttcttcggcgtcggccatcggcgcagctcgacaacgaggacgacggggcggctcgacggctctcaaacaacaccggggcagagctcgtcatggccgacgccgctgtgccccttgcggccgctgacttcgagcaggtggaccagtttacgtgcggcgggttctcgttgacgatggcgatgaatcacctcctcgccgggggagagtcggtttgcgccatcgacagcgaggaagggagggcacgacggtcgggatggagggcatggcggcgagggaggccagcgagaattagatcccgtcgtcgcctcatgcgcctgtcgtcgtcgtctggcgctggccatcgtcgcgtgaaacggtggcaccgccgccggctccccatccacccgccccctcgcctcaagccgccgcctcctcatccgccggttgggaagagggccaccggcgccgggtgggtggaggtggggaaggggaaagacaatgtcccttctcctttcaagggcaaagaggcgaattccatggtccatgcagacaactggtcaaacaatgctctagctcccatacggcatcgaaaggctccacagtcatttgcaatcaaaaccatttga</cdnaseq>

Protein Sequence

<aaseq>MSRGAYLHPRMEGAADPTGRRLPCQPSSPLQAAIAFLLRRRPSA QLDNEDDGAARRLSNNTGAELVMADAAVPLAAADFEQVDQFTCGGFSLTMAMNHLLAG GESVCAIDSEEGRARRSGWRAWRRGRPARIRSRRRLMRLSSSSGAGHRRVKRWHRRRL PIHPPPRLKPPPPHPPVGKRATGAGWVEVGKGKDNVPSPFKGKEANSMVHADNWSNNA LAPIRHRKAPQSFAIKTI</aaseq>

Gene Sequence

<dnaseqindica>5642..5701#4977..5047#3463..4005#1..37#atgtctcgtggggcgtacttgcatccacggatggaaggtgtgtggtactactgttctgaaacggtatctcttcgacgtagctgggataattaaccgattacacttcagaaaaataaaattgcttgatcttgtcactgtgtggcaatgtctttgaaaaatacttagcagagaagattattcaaacgctactcaatttgttagaaagccagagatagaaaaacttatcggtctgatagactaaaagttaatgtattcatccaaggcttgaccaagaggggttaggtactgatgtgtgaactggagatcgatcaaaacctcgttatacaatgccgacgaaggccataaatacgtgcatgtgatggcctcaatgaagtggatcttgcagaatccttgctaagattggtctcgcacgcgcgccaaaactgagatccaaattagtgcaagttcactgttttgccatgagcacgcgagtctggatcatactatggtacagtccattatgtttacagttcagattctttttcacgtgatctctctccatccaaatttttagggccatatgtatttcaggattggaacttaattcgtaagttttgactatcagattgacaatgtatatgtttactgcatatggccatatatttgcattgtcaaaacataattcactagatttatgtttcagtatatttgcatgtcccactcaaaaaaaagtagatttgcatgtccatgattttgtagtaagttgctccctccatctaatagtgttacaatatactgtatgacatttaagaacaagttaccagctccaaaactcatagtatctctttgactctttcagaagggacatttggtccataccttctactactagtttggaatgcatggtctaattggttgtagtctttctcatgtagaaatgtatccagcttgggaccctttttgttggtctcgtaattcttctgggcagttcatgatgcactcgatattgaatgctgcgtcaataaattcacaactgcatttcagcaataagtccatctggaaattaattgacaatttcactcaaggtaacatttttttatctgtatattttgtagagggtttgttctgacaaaagacaacacatgaccggatagagatagctagagaggtggcagatgtttggatcaaaggaacaaaacacaacaataaaaacgtaggaaaagaaaatatatagtgcaagattggaaaaaaaacatatgaacaattatatagacgggtgtttggaatgcaagatcaatattagaagatagcactcttgcttttgttactaatgttcggtaccccattttcccatcccctctccctcgttttccgcgcgcacgctttttaaactgctaaacgatgcattttttacaaaaaatttctatacgaaagttgcttaaaaaaatcaaattaatccatttttgaaaataaattagctaatacttaattaatcatgcgttaatggaccgctccgttttccatgtcgactgtttgcgttggaaacctgggctgccaaaactgagcctaaattcataatgttctcaaggtcacctaagagcaagtttaatagtatagcccactactagctccaattcaccaaactaatagccaattcatacaatagttaattaatatactattaatatatggtcccacatgtcatacacacattgcgtcttggagtccgcgctgcagttggctacagatctgtagcccgctgctcttctctctcattttttatctcattaaaatatgtttatagctggctaatagtctgttattgtacctgctctaattgtgttgcctcttgtcatttactccctcccttcctagggaaaattttcattggctttcacccattttttttagaaacacagtacaaacgcaggcgctcacactctacccctataagctcctctggaagactgggccggcatgtcttgagattgacgaagtcaccgcaggcgcctctagctacccctatgagcttctccagaagactgggccggcatgtcttgagattgacgaagtcaccacaggcgcctcgctatcgacggttacgttgcctaccactgaaagagtaattagctgtaaatgcgagcacccatgtcaaatctagtatttgaacttgggtgggttggttccaccacaaggaacctagctaaccagttgagctacggtcactttactttcacctcatttttttcattcctttgcttgtaatagaataatatttgaatgctgaaactcaggaaacgattccaagggaatacttgggttcattcttcattacaaacacctctttgggtaggaaattaaatactatggttttcaaatccttgtaattttcctttgaaaatcctacatcctaaataggcctgtagtgtttgcatctcttttctgattgccatatattacctttgtctcataataattgcatttctagggaattagagatagattaacggcaaacacaatttaccacaataaccgtatttaataactatactgcatgcgcatattccatatgcatacttgactaaaaggaaggttgagacatacatcacataagtaaacttaattaaaaggaaggttgggatacacattacatttgttcggtcctatcttatcagaaatataatttttttttgataaaatttgaatggtaaaaatgtaattattatataaggaagttagtaactcactttgcttggtgaggcattttgtttgtcctaggcagtgtggctttgcaaaaaaaaaaaaggtggtgttgttttcttattaagatatactactagattttacctcgatttctattagcacgttttttatctggtgtgtttaatgcaaaaaaatttctatatagaaatttctttaaaatatcaaataaattaaatttcatgtttttaataattaaaatttatttaatcatgcactaattattttcttatttttgcgtgtcctgatttcatctccatgtttagtagaaaataacgatagaagaaaaaataaatgaaagttgctggtcctctgcatgctagttttatgtgcatgtatgttttagcattaattatttttcgttgtttcggtcttgtatcttcggctaataagccgcaggcaaaaaaacaaaaaaatataaccaattaggcagtatcagcactttgtatccttatagcatatccaatagcctcttcaattgcttctccaagccaaattttagtcactctagcaaaaaaaaaaaaaaaaaaaacttctccaacagcttctctagcgggatggcggccaaaacactccctcccctagccagatttgaccagtcgaagtcactggctaatggtgggccccacgtgcttttgccacctgctgcttctctctctgcttcttctctctcgtatccgttgtcgccgttcgttagtgcccgccggcccagtgtcaatgcaggcgccgccgaccctaccggccgtcgccttccctgccagccgtcgtcgcccctgcaggccgccatcgccttccttcttcggcgtcggccatcggcgcagctcgacaacgaggacgacggggcggctcgacggctctcaaacaacaccggggcagagctcgtcatggccgacgccgctgtgccccttgcggccgctgacttcgagcaggtggaccagtttacgtgcggcgggttctcgttgacgatggcgatgaatcacctcctcgccgggggagagtcggtttgcgccatcgacagcgaggaagggagggcacgacggtcgggatggagggcatggcggcgagggaggccagcgagaattagatcccgtcgtcgcctcatgcgcctgtcgtcgtcgtctggcgctggccatcgtcgcgtgaaacggtggcaccgccgccggctccccatccacccgccccctcgcctcaagccgccgcctcctcatccgccggttgggaagagggccaccggcgccgggtgggtggaggtggggaaggggaaaggtgtgactgtagaggaagagaggggaagaaggtagaaattaacatgtgggacccactaccagattggagaagataatagagatgcatgctattggagtaaaaggcaaatttgactccccaaatttttggcaagattgctaaatgggtgtttggagaggctgttggagatgctcgttgggatgaggttgtatgatgaaatgcatggaaaatttgtggtagtagcaaatctaaaagactgcgttaagttaaattgcgccctaaaatttagaatagaaatgacaagtgggcatttgatatttgttaagcacaagagtgatatatacacaaacagactctatgggttggtttggtttgtggcctaaattggccttaccaatttttgtcaatgtcaaattttggcaacttttgacatggctaattttggcaaaagtaaaattgtgtttggattgaagccaaaatagcctaaattaactgttgaaatggcctattttcttaggcatgccaaaatttggctccaaaccaaatagacaataaacactattgaaattgtcaaatattggtaaggccaatataggcctcaaaccaaaccaaaccctatgatctcccaaaattgaacaataatactcctatgtcaaagtggcggatctttcccgcttgaaaagggcactgaacagtatctttattgttgcctacagccatgcttgtctggaagcattgcattattagtagttaagtgtccttacttggaacatatggcgaacaagcaacctaaacaacgcaaaatgggtcacctgaaaaagaaatccaactcaggaaggaataatcttgctagcagttttatagtttgggagcagagaagctttaactccagagaaaggaccaacctaatttctttagccatattctcaactctcctgtatggcactagtaggagcactatttttatgtttgtgttcccgaggtttctccagacaatgtcccttctcctttcaagggcaaagaggcgaattccatggtccatgcagacaactggtcaaacaatgtagggtggcagcaagatagtcgtaagcactagcacaaagcaaaagggaactgatcatatgtgaatatgtgatgttgattgttcataacacctcagaaatgatcagaagaaaccctcctccagctcttatgggttttgtctatgtcttttacttttatcttctttttttttttttgcttcagcttcttcttgtagtttagttatgctgaattattggagtttgacaccaaaattgtttgtttctctccttttttatgatttttcttcacaaaggaattaagcaggggaaattacagaacaacgcaaaactgaaacacacgcaggacatctggagtgtcagtgcctagctcgctttgccttgtgccactgtcacctcgtctctgcctttattttggtcatctcattttcatctcgcccggctctcttcccacaaatcctctactcttttgtggctgcctgcctcctagcaactaacgctaaagcacatgaaaatattggagcacatgtctacctcagactctctttatccatcagtatctttgctctgttgccatgtcgaaaatgccttgcttttggtccttcatcgcctttcaggctctagctcccatacggcatcgaaaggctccacagtcatttgcaatcaaaaccatttga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0466200, RefSeq:Os09g0466200