Os09g0478200

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Revision as of 07:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0478200| Description = Conserved hypothetical protein| Version = NM_001188960.1 GI:297727050 GeneID:9269152| Length = 6380 bp| Definition ...")
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Gene Name

Os09g0478200

Description

Conserved hypothetical protein

Version

NM_001188960.1 GI:297727050 GeneID:9269152

Length

6380 bp

Definition

Oryza sativa Japonica Group Os09g0478200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18969715..18976094

Sequence Coding Region

18969970..18969981,18970097..18970315

Expression

GEO Profiles:Os09g0478200

Genome Context

<gbrowseImage1> name=NC_008402:18969715..18976094 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:18969715..18976094 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>attatgagtccatgggctacacccttcatatatgtattttgtgtgaagaccctctacagtctttatgaggcattattatctggggatacattgaaaggatggtggaatggacaaaggatgtggatggtgaaaagaattacctcatatctatatggcttcattgacaccatccgaaaattgttaggattgtcaaagatgtcatttgaaattacagcaaagttgcagggctaa</cdnaseq>

Protein Sequence

<aaseq>IMSPWATPFIYVFCVKTLYSLYEALLSGDTLKGWWNGQRMWMVK RITSYLYGFIDTIRKLLGLSKMSFEITAKLQG</aaseq>

Gene Sequence

<dnaseqindica>6114..6125#5780..5998#aattggattttgttgggatccaatccacgccaccgagtccttcgttgtccggagaagacgggagaggcaactgccacggtcaccgactcatcgtcccatgccatgttgaatccaatggcagccgtgtcatcgtcgtcctcctccgtcttcaagcagtggatcgagagctgtcgtcgctcgatatagggccagcgccacctgatcgagggctagtgtcgccgggaggtacatgctagctgaatctggcggcggggtgcccgtcaacctcaatccctcgcccttcttctccctccaaggtgccctctccccttcctcatcagcgtcctctgctcttcatgagaggggaatgcccattgtggagaggctcggcatcctcggcgccgcctgagggaaccgctgtccactactgttgtcgccaaaacaccaccgagcaacgggggtcgccttggcttcttccttgccattccctaggttcttcgctgccgcgtcgatcggtttcttcctcacctcgacccgagctcgctgcgtgccggctagggaaggaggagaggaggggcagcacggtggcagctggtagaggggctggcctgccgaagaaaccgaggggaagggaaagtggagaggagggtctttttttttccttttctactatttttttatcagctgtcctccgcattcctttccttccttaaattcccatgtgcaggagtactacgcaataaggaaagacaacatacaattcacctaattcttcacttagactaaatatgtacttaattaacttaataagctagaaatacaatttattttccgttgcaacgcacaaactcttggctagtatccaaaaattatatagaaacaaagtgtaaaggaccatcaatccaaagacactcaataatcgtctcccatacatttggtcctggataaaacactccctgaccacgtgctccagtggctgacacagcaccacaaccaaatctcatcaacctggcttctaaagatatatgctatataaaatatattctagtaaaaaacaatttatatagtatgacgttatatatgcacatatctgtgcatcagaattggttagtccattttgtcagctagtgatcgatcgagctatatatgcatatattactacggatcctatgctagcgaagatcgagctcactacacagagagagtagctagttagccgccggcgatggagacgacgacgacggagaggcggcggctgttcgcgacggagaaggtgggcggcagggcggtgtacaggctgcaggcggcgacggtggccgccgggatactgctggtgctctactacagggcgacgcgcgtgccggccgccggcgaagggcgggcggcgtggctggggatggcggcggcggagctctggttcgccgtctactgggtcatcacgcagtccgtccggtggtgccccgtccgccgccgcaccttcaagaacaggctcgccgagaggttggtttgaatttaacttactgttattttttattttttgcatgtttatttattatctgaagtggcatcaaatatactctctttgtttttttaatatataacaacattgttttcttagatatgttgatcattcgtttttattttattctgacttgatttatcgtaaatgttttttagtatgactttgatcttttttatatttgtaaaattttttgaataaaaacgaatggtaaaagatttacgacgccttatattaaaaacggaggttgtacaacataactacgtgtcttttgtatggttttgaaagctggtagcgactggccaagcattaagcaagtgattgatttttctttaagaaaaacacacacgccatgccagacatacttcattataatattttaataaaaacacgccatgtcagatatattttattacaatttattcttagaacatctccaatcggatttataaaagaatcttcaaattggaggtgttaataaaatatggacatatttcttttatttttaaatatcatagtactatgtggtgctttggaacgtgatgggaagaaatacgacaaatgattatacagggattagttttatctatctggtgtttagatgtggtagtttttaggcagggtgggttttaagtggtggggaaatacactgttggaagaggaagatgacaactccgtttttataacatttttggatacactatttcaccttctcaaggatgtcctcccttccacccaacacctccacgttgccatccttcttgtcttgctgtgcctcctgacaccgcctcctaacacgccataccttataggcttttacaccgtgtttagatcctaattttttcttcaaacttacaactttttccatcacaccaaactttcctactcacataaacttctaacttttccatcgcatcgtttcaatttcaattaaagttttaattttggcgtgaactaaacacagccttaggtagagagaagctgttgctgccatcgccgttgcaatctccagccgctgtcttcctctaggacaaccggatttccggcactcacctctagcggcggtgaggaggatcattatttaaaaacggatgtagcatttggaatgtccacataatcaagcacaaccgcgtaaagagtcgttcctccaacccaagcaccttctcttaagtgcttaaggcccatttaaacatatgcacctgctaagcacatatgctttttcagattaggacaccttctatctttttttatttatttgaaaggaacatttcctatcttagttacagctggtagaataaaatggttagtttttttttataagcactcctctcctttaagcatttgcatagttgcatcgggcatgatcctaaacgatccacatactgagtaggtgatcagaacagggacaaccagtgcttggaattttggttcgaaatttcggtaatttcggcccccaccggcaagcacaaatctctctgaaattttcaattttttgtcaagtatttgtaaattttttcaaaatttattcaaattcagtcaaaatatgttaaaaattcaaaaaatacccaaaattctgaaattttggtgatttcagttttttcggcctccaccggcaaaaaaacagggtttcaaaattgcaaaccctgggtacaactcgcattttgggcccaacttgtctaactcatcatgtttcttcaggggcgtcactactttaaatccatattttaatttcaaattttatttcgatagaaacatgcaaaactatatatactcgatttgttaaaaaaatctcatccaggttatggctctgagtgttctcaacagttaacccaattaaatcatcacaccatcacgaggacattcattagttttttttttcattttgcaacttaatgttgttttattgtaaaaatattatggccgaatacacatcgatgtagaggatgaagttatatccatcatcgagaaaacatatatttcccacaatttaacacatttaccatgtattttggagcagatacaaagaaaatctacctggtgtggatgtttttgtatgcactgcagacccacacgcagagccaccaagccttgtcatctctaccatcctatcagtcatggcatacaattacccatcagaaaaaataagtgtgtatctttctgatgatggtggttcaattcttactttctacgctctatgggaggcatccatgtttgcaaagaaatggctaccattctgcagaagatataacattgagccaaggtccccagctgcttacttctcggaatcagaagggcatcacaatctgtgctccccaaaagaatggtcatttatcaaggtgtgtgcatttttaacattcttctttaaggcatttgtaattcaacaagttggacataattaaaatcagctctcacataatgaaatatatatacggttcccctaggtttcggtaaaataggagaaatcaaaactctcatatgactggcatgactttttttttttcagaacctgtatgaagaaatgagagagagaattgattcggctgtcatgtcaggaaaaattcctgaagaaattaaactaaagcataaaggatttgatgaatggaactcggaaatgacctcaaaaaatcaccagccaattgttcaggtaagcctttcacgattatgattttaaatagtacttttttatatatatttgagaggttctaaatgttgcttctttcctaggttctgatagatgggaaaagccaaaatgcagttgatgacgacggaaatgtgctaccaacactggtatacatggcgcgcgagaagagccctcagtatcaccataacttcaaagccggggcattgaacgctttggtgtgttcactaacgttatttatttatttttatgttaaaacaagcctaacaatactccccctactttcattttaggttgcccttatatatcttcttataaatgcaaaaacactgcaacaagatgcaccatgttttcatttttgaattaaaaaaatgaagtatccagtaggttctacaagtaaccactaaccaaaaggtcatcaaatgttattttctcatgtatcagatgctatgtggatgtagtcaataattggtcaagaattttttcatgtatcaattgcgcaccattaaatcaccacatacaatttattgtgcatcattcattgcacaaattggtcacaaaattttctctagtattttaatgttcaatatatatattccttattcctggaagtattttaaaatatgttaattttttcgttaaatgcagataagggtatcagcactgataagtgacagccctgttatcttgaatgtggactgtgacatgtattccaacaatagtgattcaatcagagatgcgttgtgcttcttccttgatgaagaaatgagccacaaaattggatttgtccagtatcctcagaactacaacaatatgaccaaaaataatatatatgggaactctctcaatgttatcaatcatgtaagttccatatatcaaatcaaactgtacttaaatacattcccatgcttgcaaaaaaaagaaatatgctatcatatttctacactaacaaaacaaatttaatgtaaaggtggagatgcgtggtttggacagtgctggtggatgtctctatattggcacaggatgcttccatagaagagagatcctttgtggtaagaaattcagcaaagattacaaggaagactggggcagaggaataaaggaaagaggacatgagaacatagatgagattgaagagaaggcaaaatctttagcaacctgcacttatgaacttaggacacaatggggcaatgagattggagtgaaatatggttgcccagtagaggatgtcatcactggattggcaatacattgccgaggatgggagtcagtctacatggaacctcaaagggcagcatttgtgggtgtagctccagcaacacttgcccagacaatactgcaacacaagagatggagtgagggcaatttcacaatttttctttcaaagcacaacaccttcctgtttggacatggaaaaatcagcttgcagttacagatgggctactgcatatatggattatgggcagccaattcactgcctacaatctactatgttatgattccagcactaggtcttgtcaaaggcactcccctatttccagaggtaccgttaaattaaatgataagccatactttgatttcatttttgtcattaaaacttatttttattattgaaactaacactacacttacatgacatttagattatgagtccatgggctacacccttcatatatgtattttgtgtgaagaccctctacagtctttatgaggcattattatctggggatacattgaaaggatggtggaatggacaaaggatgtggatggtgaaaagaattacctcatatctatatggcttcattgacaccatccgaaaattgttaggattgtcaaagatgtcatttgaaattacagcaaaggtaagtgatggcgatgaagcaaagaggtatgagcaagaaatccttgagtttgggtcatcatctcctgaatttgtgatcatcgcaactgtcgcattactgaacttcgtctgcctagttgcagggctaagcaaaataatggcaggtgtgtggaatgtgtttttaccccaggtcattctatgtggactgatagtgatcactaatatcccaatttatgaggcaatgtttgtgagaaaggataaggggagaataccattaccagtcacactagcttcaattggctttgtaatgttggcattcctgttaccaatagtttgaggtcctaaaatgggaagcgatgccttgtaaaatgattatggaaataaattgcactgccttttctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0478200, RefSeq:Os09g0478200