Os09g0482000

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Revision as of 07:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0482000| Description = UAS domain containing protein| Version = NM_001070034.1 GI:115479810 GeneID:4347401| Length = 2572 bp| Definition =...")
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Gene Name

Os09g0482000

Description

UAS domain containing protein

Version

NM_001070034.1 GI:115479810 GeneID:4347401

Length

2572 bp

Definition

Oryza sativa Japonica Group Os09g0482000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19165493..19168064

Sequence Coding Region

19165531..19165761,19166095..19166277,19166374..19166589,19167412..19167972

Expression

GEO Profiles:Os09g0482000

Genome Context

<gbrowseImage1> name=NC_008402:19165493..19168064 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19165493..19168064 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgtctccaacctcgtcggcgtcggcagcggccagggggagcgctggcgccggcgataccctacgcaactcctgccacgacttcgcgcgcagcctggcgcggctgccggccagcatcatggacggcctctccaggtccatggctcgccggagccgccgcccccgcgacacccagcctcaccctcctcttcctccgccgctgctgccggaggagctcttcttcgccgagttcgagcggcggtacggcggccgccacccgttcttctacgggtgccggctagccgaggcgctggggatcgcgcggcgggaggggaggctggtgttcgtctacctccacgacgccggcggcggcggaaacccctacgccgaccagttctgcacggggacgatgtgctccgacgtggtggtggagttcctcgacgccaatttcgtgtcgtggggcgccgtcgccgggagaggggaaggtgcggccatggtggcggcgctgcggcccggcagcttccccttctgcgccgtcgtctctcccgtctccgacgagagcatcgtcatcctgcaacaggtagaaggcccggtttcgccttcagagctggtggacattcttcagagaacaatcgatgagcaacgtgcatcctccagacagtcttggcctgatgagcagctagctgcagcagtgagagcctcaagagctgatgaagaagagaggatgagatcagtagctctaaggctaagacaggagcaagatgcagcttatctcgaatcacttcgaaaggatcaggagaaagaaaggtccaggaagagtgttcaggagggatctgcgaaaccaaaggcgagcaatgtgcttcgtccaagataccctggtcaatctgcaagggagcctaacaaggcagctcaggccagagctcctgctcagaatcagaatggaactgtggcttcacacagagcagaagcaaataccaagataatgataagatttcccaatggagagagaaggcagcaggcgttccatcatacagataccatcagggaaatctacaggtatgttgattccctaggcataccaggcatcggaaattatcagctcgtgagaagctatccaaggaaaacttatggtcgccagcagctggagatgagtctccaagatgcaggcttctatccaagtgtaacactgtacattgaacagcttcagtaa</cdnaseq>

Protein Sequence

<aaseq>MPSPTSSASAAARGSAGAGDTLRNSCHDFARSLARLPASIMDGL SRSMARRSRRPRDTQPHPPLPPPLLPEELFFAEFERRYGGRHPFFYGCRLAEALGIAR REGRLVFVYLHDAGGGGNPYADQFCTGTMCSDVVVEFLDANFVSWGAVAGRGEGAAMV AALRPGSFPFCAVVSPVSDESIVILQQVEGPVSPSELVDILQRTIDEQRASSRQSWPD EQLAAAVRASRADEEERMRSVALRLRQEQDAAYLESLRKDQEKERSRKSVQEGSAKPK ASNVLRPRYPGQSAREPNKAAQARAPAQNQNGTVASHRAEANTKIMIRFPNGERRQQA FHHTDTIREIYRYVDSLGIPGIGNYQLVRSYPRKTYGRQQLEMSLQDAGFYPSVTLYI EQLQ</aaseq>

Gene Sequence

<dnaseqindica>2304..2534#1788..1970#1476..1691#93..653#agccgctttaccaactctcccaagaacacacacaagacacaaactgagatgctcacctgtcgctgcgatccatttgccgctgcattttgatcatgccgtctccaacctcgtcggcgtcggcagcggccagggggagcgctggcgccggcgataccctacgcaactcctgccacgacttcgcgcgcagcctggcgcggctgccggccagcatcatggacggcctctccaggtccatggctcgccggagccgccgcccccgcgacacccagcctcaccctcctcttcctccgccgctgctgccggaggagctcttcttcgccgagttcgagcggcggtacggcggccgccacccgttcttctacgggtgccggctagccgaggcgctggggatcgcgcggcgggaggggaggctggtgttcgtctacctccacgacgccggcggcggcggaaacccctacgccgaccagttctgcacggggacgatgtgctccgacgtggtggtggagttcctcgacgccaatttcgtgtcgtggggcgccgtcgccgggagaggggaaggtgcggccatggtggcggcgctgcggcccggcagcttccccttctgcgccgtcgtctctcccgtctccgacgagagcatcgtcatcctgcaacaggtagtacaaaaccccataatattacagaagcaacagaatccaaagcgttccctaaatgtttgacgccgttgatctttttaaacatgtttgaccgttcgtcttatttaaaaacttttatgaaatatgtaaaactatatgtatacataaaagtatatttaacaatgaatcaaatggtaggaaaagaattaataattgcttaaattttttgaataagacgaacggtcaaacatatttaaaaaagtcaacggtgtcaaacatttagagatggagggagtattttgctccatcgtttcttcttcatcttatcagatacaacgaaaatttgaatttcagaacttagagtttaatttagagttgattttgatgtttcttttatttggtttaatttttcagcattgacttataaatatttaaatcgcaaataaaaatttgcccacaaactattttttgtcgttaataaacatcacagcttataatcaagtatcgtctctagtggtttcatccataaccatcataactgagcgaaaaccagtgaaatcgaattcttttgcgccaaaattttgaattttaggattttttttaatttggccggtttatcgaacggtttctaaatgcagaccagcaagacaaggccaacgaaaccgtgataactgagcggttatcgtcgcattttgaaacgctaaagcaagtagcaacaatactaacaattatgtcaacctatttgcacactaaactctacagcatattggttgcatcgatctatcttggcattttaagtttttgtattgattaagagatgacacaaactgtatcttctttcaggtagaaggcccggtttcgccttcagagctggtggacattcttcagagaacaatcgatgagcaacgtgcatcctccagacagtcttggcctgatgagcagctagctgcagcagtgagagcctcaagagctgatgaagaagagaggatgagatcagtagctctaaggctaagacaggagcaagatgcagcttatctcgaatcacttcgaaaggatcaggtagacacatgcatgttcatcatgttgaggtggtgttcttcatcatcagttcatgccctgttgatcagggtgagctcactgactccattgatgcaggagaaagaaaggtccaggaagagtgttcaggagggatctgcgaaaccaaaggcgagcaatgtgcttcgtccaagataccctggtcaatctgcaagggagcctaacaaggcagctcaggccagagctcctgctcagaatcagaatggaactgtggcttcacacagagcagaagcaaataccaaggtatgaccaaaaaaaaaggattatctcttgtcctcgtgtacagatgtacagtgcatttgtaactgctagcagcaatatttgggaaaaaaaagttaattacttaacatgaaaatttctggggtttagttattcagttgacaagtgttcagatcatgcattcaggtttttctgatgtctgaactccggttacagtgataaaaatatcaagtgttaatgtgttatccatctactagtatcattgtgcaaaggatttttatgggaactttggtgcagaactttttatgggaacatccctgagttaagaccagattaattgtagaactttttatgcagataatgataagatttcccaatggagagagaaggcagcaggcgttccatcatacagataccatcagggaaatctacaggtatgttgattccctaggcataccaggcatcggaaattatcagctcgtgagaagctatccaaggaaaacttatggtcgccagcagctggagatgagtctccaagatgcaggcttctatccaagtgtaacactgtacattgaacagcttcagtaaacatgctgtaaccatgaagatgactgcaaatttcgtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0482000, RefSeq:Os09g0482000