Os09g0487700

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Revision as of 07:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0487700| Description = Ovarian tumour, otubain domain containing protein| Version = NM_001070062.1 GI:115479866 GeneID:4347429| Length = 29...")
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Gene Name

Os09g0487700

Description

Ovarian tumour, otubain domain containing protein

Version

NM_001070062.1 GI:115479866 GeneID:4347429

Length

2926 bp

Definition

Oryza sativa Japonica Group Os09g0487700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19459500..19462425

Sequence Coding Region

19460589..19461078,19461180..19461298,19461437..19461477,19461575..19461673,19462118..19462289

Expression

GEO Profiles:Os09g0487700

Genome Context

<gbrowseImage1> name=NC_008402:19459500..19462425 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19459500..19462425 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctatctacacacctactgtctgtttacaacgctgtacttatagcttgtattctcagtcttgtcagttacaaggagggctgacacagggcatggcattatggaagtattctcgttcacaagcagtcggttatcatgtaaagatcagattagttggtttgcctcctaagatgaacataaaatcactgcgaacatgttttgccagttcggggaaacagttgtgtggcagacaacctgcgagggataatattctaaagctaaagcttgatgagccctcacgtcagaagttgtatagtattctctgggattcaagaagcataggacacaaagttggagctacaggcactggacttttcctaagttttgcagttcctgcgaaggcaaatgctgagggtcctgtggacaataatactgatagcccccaaactactgaatcgtccactagttatgctcatgggaaaaaagtttgcacggattattctgttactggcattcctggagatggaaggtgcttgttccgatctgtggctcatggtgcatgtattaggtcaggtaagcgacctgatgatgatctccagagaaagatggctgatgacttaagagcaatggtcgccgatgaatttatcaagagacgggcagagactgaatggtttgttgagggggacttcgatgcatatgtctctcggattaggaagccacatgtgtggggaggtgaaccagaactgttaatggcttcgcatgttcttcggatgccaattactgtgtacatgcatgataaggaagctggtggtttaatagcaattgcagaatatggtcaggagtacgggaaagaagatccaattcaagttctttttcatggttttggccattatgacgctctacagataccaggaaagggtggtccaaggtcaaggctgtaa</cdnaseq>

Protein Sequence

<aaseq>MAIYTPTVCLQRCTYSLYSQSCQLQGGLTQGMALWKYSRSQAVG YHVKIRLVGLPPKMNIKSLRTCFASSGKQLCGRQPARDNILKLKLDEPSRQKLYSILW DSRSIGHKVGATGTGLFLSFAVPAKANAEGPVDNNTDSPQTTESSTSYAHGKKVCTDY SVTGIPGDGRCLFRSVAHGACIRSGKRPDDDLQRKMADDLRAMVADEFIKRRAETEWF VEGDFDAYVSRIRKPHVWGGEPELLMASHVLRMPITVYMHDKEAGGLIAIAEYGQEYG KEDPIQVLFHGFGHYDALQIPGKGGPRSRL</aaseq>

Gene Sequence

<dnaseqindica>1090..1579#1681..1799#1938..1978#2076..2174#2619..2790#gatctaccatgcgcggtggatatcgattaggcgtcgtctcatcgtcttcctcctcgcgtgcggcggcggcgcgccagtggccgtgactgactctgcgccggcggcggcggcggcgtgcaccggcgaatcccctcgcgggaacggaggtctaaagcctctcccgccaccactatcccttcctcttcggctcacgctcccgtccccaataacctccgctttcgtcagctccattcttgcaggcgtctctcctcggctccgctcgcttcggacagtccgaaggctaaggtgcggattttacttcattatcctctgcaatttgtgactaatttgagttactactatcttccaatttatctgctctcccgggtgaggggaatggtttgggtgcattggcacttgctgaattcaattgtgcatataatgcattattttccaccagcttagggttgtagtcttgtgaattcgggcatgggaatggcctggtagcacgaaatctcggcttcgcggccaagacaggaacttaaataatcttaatgagaatagttttctagtgattcgctgctgcccatgccctcgaatgctcgggatttgggagggcaatttctccctgtagcacatcctgagaagttcacgaggataatatggattctctacgcaagtgtgacaaagaaaaggaggacaaattgcttttgttctagcaagtgtgcgcttatgatttagcatgcccatccttcccattgttttgtcgaatctcagcagaaagtggtcgattgctagaggttggagacattcagtcttttatgctcactaataactatctgccacacatttatttcctggatatgtcaacgatgaaactattttttgtgctgaaaaataatttaatcctcttcaattgatactaatgttgacatcaatcatatctatcataggtccgttgtgtcatggtggatcttctacttcattgtggtggtggcttgctttatttgattttcgtaagaattatctcatgttccactaattcttaattttggtcatcgaaacatgtttttcagcttatacttggtggcgcggtgctgcctgaagcagatggctatctacacacctactgtctgtttacaacgctgtacttatagcttgtattctcagtcttgtcagttacaaggagggctgacacagggcatggcattatggaagtattctcgttcacaagcagtcggttatcatgtaaagatcagattagttggtttgcctcctaagatgaacataaaatcactgcgaacatgttttgccagttcggggaaacagttgtgtggcagacaacctgcgagggataatattctaaagctaaagcttgatgagccctcacgtcagaagttgtatagtattctctgggattcaagaagcataggacacaaagttggagctacaggcactggacttttcctaagttttgcagttcctgcgaaggcaaatgctgagggtcctgtggacaataatactgatagcccccaaactactgaatcgtccactagttatgctcatgggaaaaaagtttgcacggattattctgttactggtgagacagtgtgcgtgtttttctaattactatacaatatgcatttggttaaagcatgcatcgtctgctcacttgtgtttgattcacatggtaaccctcaggcattcctggagatggaaggtgcttgttccgatctgtggctcatggtgcatgtattaggtcaggtaagcgacctgatgatgatctccagagaaagatggctgatgacttaagagcaatggtatgcttgtaatgttctgctgatgtactactgttgatccattctgttcttagatactaaatgttgctctggaagcaacgcaaccatttctggtgaatttatcatgtaaaagatctatttaaatggtgtcactgttaggtcgccgatgaatttatcaagagacgggcagagactgaatggttagttctacctgtcctcattattctgttagttactctgcatctaaatattgttgagttacgcattcttatgcttcgctatgacattaattcacaggtttgttgagggggacttcgatgcatatgtctctcggattaggaagccacatgtgtggggaggtgaaccagaactgttaatggcttcgcatgttcttcggtgagaattagccatgatgtttggagttattttactctcaccatttcaaatgcagtatacatttgtgcagtaacctgttagaatacttatgccctcttggtcatatttatatagggttgatggttagttggtttgcttttaatccattttaggattcctgggataagtttgtccacttatactgtcttgtttgtttgtttttttttgtcatgttatgactgttaagcatcttccttttttttttgcggggatcttcctttttttttttcaaaacacaactcccaaaagtcattaatattccattttgttaggctttgaccaaagtttattaatgtagctcaacagcaatagtggatagtttcatatatgtgtagtcttgttgtattgtccttctgaaaacgggaagtaacaaaagctctaatatgccgttaccaatgtggccaggatgccaattactgtgtacatgcatgataaggaagctggtggtttaatagcaattgcagaatatggtcaggagtacgggaaagaagatccaattcaagttctttttcatggttttggccattatgacgctctacagataccaggaaagggtggtccaaggtcaaggctgtaacatttggagctcagattccaaacagtaagttttgaaccaacctttgtttccctttcttttcccagtacgcttgctgtccaaatgtaaccagaatctaccctcaacaaatttaaaatgctgcgatgttccaagttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0487700, RefSeq:Os09g0487700