Os09g0493700

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Revision as of 07:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0493700| Description = Similar to CUC2| Version = NM_001070082.1 GI:115479906 GeneID:4347449| Length = 3074 bp| Definition = Oryza sativa ...")
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Gene Name

Os09g0493700

Description

Similar to CUC2

Version

NM_001070082.1 GI:115479906 GeneID:4347449

Length

3074 bp

Definition

Oryza sativa Japonica Group Os09g0493700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19775671..19778744

Sequence Coding Region

19776007..19776356,19776558..19777107,19777360..19778402,19778492..19778657

Expression

GEO Profiles:Os09g0493700

Genome Context

<gbrowseImage1> name=NC_008402:19775671..19778744 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19775671..19778744 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggatggagaacccgccgctccggtggccgccggggttccgcttcagcccgaccgacgaggagctcgtcctctacttcctcaagcgccggatcgccaccggccgccccaccccctacatcgccgacgtcgacgtctacaagtcccacccctcccacctccctgagaggtcggcgctgcggacgggggacaagcagtggttcttcttcagccggatggaccgcaagtaccccaacggctcgcgggcgagccgcaccaccggcgagggctactggaaggccaccgggaaggaccgctccatctgcaacggcggcggcggcggcaccgcctcggggcgcgcggtggggagcaagaagaccctcgtgtaccaccacggccgcgccccgcgcggggagcgctcggactgggtcatgcacgagtacaccctcctcgccgacgcgctcccgcccgccgcgcgcgaccgcgaggcgtacgctctgtacaagctgttccacaagagcggcgccgggcccaagaacggcgagcagtacggcgcccccttccgggaggaggattggctcgacgacgacgaccaccaccacgaccagcttcctgctgaggcggctcttccggctccagccacaactagtggtagagctgcaacaactgaggagcatgctgactttgagcttccgggtggggatcttgatgtgctccttgcgcaaattgaaaatgatcaggatataatcgaagcgcaattggatttctcaactcatgttacttcccaagttcagattcagcatcgtgttcatcaaggttggctcagtgatgatggcggaaaatcagatgttgcggatgctacgactagtggcagtgctttgttgatggcagagaatacgtgcgctgaacttccaattgatggtctcgagcaacttctgatgcaaatatcggatgatcaacagacagttgaaatgctctctggtttctcagcatccgttccccaatcgcagcttcaacatgattatcatcagggttgtcttggtgttcatagggaggaggttggtgttgcagattctaccactgttagtagtgctgtggtgacagaagaatgtactgtccgtgagcttcaggatattgaagggcttctgatgcaaatagaaaatgaccaggaaaatgccgaatcactgccagatttctccacaccagttcatctccatgattgtcatcaggccgccttcggagattttcaaggaagccagagggctacattcaacattgcaaatctttctactatggtgcaggaaagcccaaattttgatctgcaaactggtccaagtaatcaaattactgagtctattctcaccaccgagccaatgaatggagaaacaaatgctgtggaagaaacaagtcctctgcgctctatgtcagtattgggtagttatgataggcaggatggtgatgatgaattccttgaaatcaatgatttcttcgacccagaagatttagaacagattttgggcagtacaagaagtcagaacttgattcctgctgatgatggagtgtttgatagtttgcaatactctgatgctccaatgtttctgcctggttcatttgacagaactggtgtggtggctgaaaaccattatgttgaatttggtgctagtggaattcagaaccagggatttcagcatacaactgaattattggcacataatcaagtcgctctaaatgtgcggaaccatatgaaggacaaccatgttgtcttctcacattcatcagatgctaccattattcatacagtgaatgagcaaccgcctaaccggagttcaaatgcttcacaatcatggttcaatggggctctatctgccttgctcgattctgttcctagcagtccagctatggctgctgaaaacataggtcttaacagaacactgcaacgcatttcgagctttaggtcacaacaacctgcaagagaagaagttagcagtactcttatcaacaccagaagaagaggcggtgggctaattttcatctcgttaatggttttacttgttgctatcatgtggacctttagcaatgggtctgcagtcaagcttagcaaggggttatggaagtttccctctacataa</cdnaseq>

Protein Sequence

<aaseq>MGMENPPLRWPPGFRFSPTDEELVLYFLKRRIATGRPTPYIADV DVYKSHPSHLPERSALRTGDKQWFFFSRMDRKYPNGSRASRTTGEGYWKATGKDRSIC NGGGGGTASGRAVGSKKTLVYHHGRAPRGERSDWVMHEYTLLADALPPAARDREAYAL YKLFHKSGAGPKNGEQYGAPFREEDWLDDDDHHHDQLPAEAALPAPATTSGRAATTEE HADFELPGGDLDVLLAQIENDQDIIEAQLDFSTHVTSQVQIQHRVHQGWLSDDGGKSD VADATTSGSALLMAENTCAELPIDGLEQLLMQISDDQQTVEMLSGFSASVPQSQLQHD YHQGCLGVHREEVGVADSTTVSSAVVTEECTVRELQDIEGLLMQIENDQENAESLPDF STPVHLHDCHQAAFGDFQGSQRATFNIANLSTMVQESPNFDLQTGPSNQITESILTTE PMNGETNAVEETSPLRSMSVLGSYDRQDGDDEFLEINDFFDPEDLEQILGSTRSQNLI PADDGVFDSLQYSDAPMFLPGSFDRTGVVAENHYVEFGASGIQNQGFQHTTELLAHNQ VALNVRNHMKDNHVVFSHSSDATIIHTVNEQPPNRSSNASQSWFNGALSALLDSVPSS PAMAAENIGLNRTLQRISSFRSQQPAREEVSSTLINTRRRGGGLIFISLMVLLVAIMW TFSNGSAVKLSKGLWKFPST</aaseq>

Gene Sequence

<dnaseqindica>2389..2738#1638..2187#343..1385#88..253#gagttgactcgccatttcgccatttcgtcgagaggttgctgtgccagtcaccaacccattccggcggcggcggcggaggagaccgagatggggatggagaacccgccgctccggtggccgccggggttccgcttcagcccgaccgacgaggagctcgtcctctacttcctcaagcgccggatcgccaccggccgccccaccccctacatcgccgacgtcgacgtctacaagtcccacccctcccacctccctggtaaccactccccccctcctcctcccccgtcgtcgattccttctcctgcacgacctcaccgtggaatcgtgttgccggcggcggagcagagaggtcggcgctgcggacgggggacaagcagtggttcttcttcagccggatggaccgcaagtaccccaacggctcgcgggcgagccgcaccaccggcgagggctactggaaggccaccgggaaggaccgctccatctgcaacggcggcggcggcggcaccgcctcggggcgcgcggtggggagcaagaagaccctcgtgtaccaccacggccgcgccccgcgcggggagcgctcggactgggtcatgcacgagtacaccctcctcgccgacgcgctcccgcccgccgcgcgcgaccgcgaggcgtacgctctgtacaagctgttccacaagagcggcgccgggcccaagaacggcgagcagtacggcgcccccttccgggaggaggattggctcgacgacgacgaccaccaccacgaccagcttcctgctgaggcggctcttccggctccagccacaactagtggtagagctgcaacaactgaggagcatgctgactttgagcttccgggtggggatcttgatgtgctccttgcgcaaattgaaaatgatcaggatataatcgaagcgcaattggatttctcaactcatgttacttcccaagttcagattcagcatcgtgttcatcaaggttggctcagtgatgatggcggaaaatcagatgttgcggatgctacgactagtggcagtgctttgttgatggcagagaatacgtgcgctgaacttccaattgatggtctcgagcaacttctgatgcaaatatcggatgatcaacagacagttgaaatgctctctggtttctcagcatccgttccccaatcgcagcttcaacatgattatcatcagggttgtcttggtgttcatagggaggaggttggtgttgcagattctaccactgttagtagtgctgtggtgacagaagaatgtactgtccgtgagcttcaggatattgaagggcttctgatgcaaatagaaaatgaccaggaaaatgccgaatcactgccagatttctccacaccagttcatctccatgattgtcatcaggtttgtcttaattttgcactttattttgtactagttcatcatgtagagtatgtgtaatttcttctgcatttgtgctcatacaattttttccaatccaagttttgaaagacacaataatttagatgtctagtccacaccttgggaacatgttatgttcctaaaaccaaaaaaacatcatcctagggattgtaattatgctgttacaattttattgcaatatgcttaagctttatttgcttggaccttactcaggccgccttcggagattttcaaggaagccagagggctacattcaacattgcaaatctttctactatggtgcaggaaagcccaaattttgatctgcaaactggtccaagtaatcaaattactgagtctattctcaccaccgagccaatgaatggagaaacaaatgctgtggaagaaacaagtcctctgcgctctatgtcagtattgggtagttatgataggcaggatggtgatgatgaattccttgaaatcaatgatttcttcgacccagaagatttagaacagattttgggcagtacaagaagtcagaacttgattcctgctgatgatggagtgtttgatagtttgcaatactctgatgctccaatgtttctgcctggttcatttgacagaactggtgtggtggctgaaaaccattatgttgaatttggtgctagtggaattcagaaccagggatttcagcatacaactgaattattggcacataatcaagtcgctctaaatgtgcggaaccatatgaaggacaaccatgttgtcttctcacattcatcaggtgcttaacaacgccatttcatttacaagcttctcttattattacccaaaattatttcagaaactatactgtccaacttctgattattgttttctcaataaaaggcagccagcatgcctcctctttgtatgaagatgaagcataatgctgcagagggtcccaacttctaattgaaactactattacttctgaacattgcagatgctaccattattcatacagtgaatgagcaaccgcctaaccggagttcaaatgcttcacaatcatggttcaatggggctctatctgccttgctcgattctgttcctagcagtccagctatggctgctgaaaacataggtcttaacagaacactgcaacgcatttcgagctttaggtcacaacaacctgcaagagaagaagttagcagtactcttatcaacaccagaagaagaggcggtgggctaattttcatctcgttaatggttttacttgttgctatcatgtggacctttagcaatgggtctgcagtcaagcttagcaaggggttatggaagtttccctctacataataggatgcacccggttatcctggtggccagtgcttcttactacttcaagtactaattcttgttttgctatcctttcctctattcctttacattgaaaaaggcaacaatctaggaaaatattagaggattatgtggtgttagcacttactttcagaatattatgcgagagatgttaaaacaaaacaaaatgagaaaaagaaacatctgaggtgaacttctggatgtttttgtcctcatcattttgatgaaagtatatattgaatgtaattaaacgatgatggattgttgagaagtgcagttgctgtgcacgataaatgaaaaatccatttttgttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0493700, RefSeq:Os09g0493700