Os09g0498100

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Revision as of 07:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0498100| Description = Similar to 30S ribosomal protein S16| Version = NM_001070099.1 GI:115479940 GeneID:4347467| Length = 1574 bp| Defin...")
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Gene Name

Os09g0498100

Description

Similar to 30S ribosomal protein S16

Version

NM_001070099.1 GI:115479940 GeneID:4347467

Length

1574 bp

Definition

Oryza sativa Japonica Group Os09g0498100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19919678..19921251

Sequence Coding Region

19919788..19919920,19920168..19920213,19920888..19921119

Expression

GEO Profiles:Os09g0498100

Genome Context

<gbrowseImage1> name=NC_008402:19919678..19921251 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19919678..19921251 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggtgcggatccggctggcgcggttcggctgccggaaccggccgttctaccgggtgatggccgccgacagccgctccccgcgcgacggcaagcacctcgaggtcctcggctactacaacccgctccccgggaaggatggtggcaagaggatggggctgaaattcgacagggtcaagtactggctgtctgttggtgctcagccatcagatcctgtgcagcgcatcctttttcgagctgggcttctgcctccacctccaatgctagctatggctcgaaagggtggacctcgtgataggcgcccaattcatccgatgactgggcgccccttggatcttgagggtgtcacggttgttgatgactccaatgttcccgaaggtggtgctgaggaacctgtgtcagaggagtga</cdnaseq>

Protein Sequence

<aaseq>MVVRIRLARFGCRNRPFYRVMAADSRSPRDGKHLEVLGYYNPLP GKDGGKRMGLKFDRVKYWLSVGAQPSDPVQRILFRAGLLPPPPMLAMARKGGPRDRRP IHPMTGRPLDLEGVTVVDDSNVPEGGAEEPVSEE</aaseq>

Gene Sequence

<dnaseqindica>111..243#491..536#1211..1442#aaaacccttgctcccacaggagtgaacacgacgcgacccgagccggagaaggggaagggaaggcggcggcggcggcggcggaggaggaggaggcgcgaggggaggcgagcatggtggtgcggatccggctggcgcggttcggctgccggaaccggccgttctaccgggtgatggccgccgacagccgctccccgcgcgacggcaagcacctcgaggtcctcggctactacaacccgctccccggtgagccctcctcctccatatccccccctcgtgctcctcctggatcggcttgttctcgagtgttgtctttgccccgttggttggcgttggcctcaacgtcttggtgaaatggtgaatcggatcagattggagagggattagtagagtgtgaaacatttctgtacgtgcgtgagaatttggctgtaagcttgtgattgaatgcctgatggatgatggaggagtatgtgctttctgttgctgattgcagggaaggatggtggcaagaggatggggctgaaattcgacagggtcaagtgagtttcatttgcttatgctcgtaatttggagtgtttgatgtgttctagtatttcctctggagaaaaattggcgtgctggagcttttgctgatgctagtctaggactgacattgctatagcagcctgattctttgatggaaactgattgtttgataggcaaaatggactgattcagttatcattgtaatgcgatcttcgttccaggagttggggtgctgttattgcttctgtgtactatttaattgtattgccaattaccatgtaccttccaaccatccgtgccttccattctctgggtagaaaatgatggattcaagggttctgaattttgtagcttgtagatgtgcttactggcatccatccatagcagaaaaggatttagagattttaagcatatgagatttgcttaacagtatccgtaacagggaagaaaattacagatataaagtttcagacatttcaagcatggtgcttagtttcatcaatagcagaactagtatctttgatcctgtattgtctagttgccagtgttcattgcccaccttgtcgagagtcaagagtctgatcttcccaatatttctttctttgagttaattgctagaagaatgctatgatgtccttccctcccttgcaaggccatgtaacagcatacaattatacttctgttgcaggtactggctgtctgttggtgctcagccatcagatcctgtgcagcgcatcctttttcgagctgggcttctgcctccacctccaatgctagctatggctcgaaagggtggacctcgtgataggcgcccaattcatccgatgactgggcgccccttggatcttgagggtgtcacggttgttgatgactccaatgttcccgaaggtggtgctgaggaacctgtgtcagaggagtgatgctgcagtaggtctccacttgtttgttgtgcctctgataagatcatgagtactgtacaatatggaaacttcctaatcatgtaatcttccattgttttctaataatttacaaggtcgtagtgctgcactatg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0498100, RefSeq:Os09g0498100