Os09g0505700

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Revision as of 07:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0505700| Description = Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC 5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt...")
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Gene Name

Os09g0505700

Description

Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC 5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5- phosphate 3-epimerase) (PPE)

Version

NM_001070139.2 GI:297609768 GeneID:4347508

Length

2629 bp

Definition

Oryza sativa Japonica Group Os09g0505700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20219906..20222534

Sequence Coding Region

20219974..20220096,20220614..20220618,20220713..20220775,20220858..20220964,20221029..20221126
,20221778..20221870,20221987..20222028,20222172..20222327

Expression

GEO Profiles:Os09g0505700

Genome Context

<gbrowseImage1> name=NC_008402:20219906..20222534 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20219906..20222534 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggcggcgaagatagcgccgtcgatgctctcgtcggacttcgccaacctcgccgcggaggccgaccgcatggtccgcctcggcgccgactggctccacatggacatcatggacgggcactttgttcctaatcttactattggagctccagtgattcagagcttgaggaagcacaccaaggcatatttggactgccatcttatggtgaccaatccttcggattatgtagaaccattagcaaaagctggtgcctcaggtttcacattccatatagaagtatccagagacaattggcaagaactcatccaaagtatcaaagcaaagggtatgcgaccgggtgtatcattgaggccaggcactcctgtggaggaagtttttcccctggtggaggcagaaaatcctgttgaattggttcttgttatgacagttgaacctggctttggtggtcagaagtttatgccagaaatgatggaaaaggtgcgtgccctgagaaagaagtacccatcccttgacatcgaggttgatggtggtctgggtccttccaccattgatgtggctgcatctgctggggctaactgcattgtcgctggaagctcaatatttggagcagctgaaccaggagaggtcatatcggcactaaggaagagcgttgaaggatctcagaacaaaagctga</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGH FVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNW QELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEM MEKVRALRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSSIFGAAEPGEVISALR KSVEGSQNKS</aaseq>

Gene Sequence

<dnaseqindica>69..191#709..713#808..870#953..1059#1124..1221#1873..1965#2082..2123#2267..2422#gccgccccccaaacacaccaccacccaacactatcggaattggttcgggagcaggtcaagcaggaggcatggcggcggcggcggcggcgaagatagcgccgtcgatgctctcgtcggacttcgccaacctcgccgcggaggccgaccgcatggtccgcctcggcgccgactggctccacatggacatcatggtaacgtgtgcgatccccctctcgcctcgccccccaccttctgatccgcgcgaaagcagtggctctagtagtatccggtttcccccccaaatcttttgaccgtgcgtgccctttggtttgtaggatgatttggtcagggttaggattgagctttagcttggagttaccatgcacttatatatgtgctaaatcgcaggaatctgataatatttgttcaaaatgaccttttgttcgacatatcctgtttcatgtcttactggaaagttagtgtagcatagctcatagatgttcagagcaaagactatgagagaatgttatgtgtgcgttagtttctgtctcttcattctaacagcctggttttcatggtgacaatttcagttaatcctgatttctctggtgatcacgtttcacttctttttttccttttcaagaggattgtgtgttattgattatgaatcgaaaatgcgaagcttggcttttgctgacctatggtttctttctccatatgctcttgcaggacgggtgagtttatgtattgcaaacaccagaatatgatagatcaatggcgattgaagtggtggtgttgtagtgctaaagaactaattcacatatgcaggcactttgttcctaatcttactattggagctccagtgattcagagcttgaggaagcacaccaagtatggtggtgctcttttactcaccttgttaactcttgttcctatatgtacctataatgctcaccattctgaaattttctagggcatatttggactgccatcttatggtgaccaatccttcggattatgtagaaccattagcaaaagctggtgcctcaggtttcacattccatatagaagtatccagaggtaaatatataattgttgagaagcagttaatggttttccttgtcttacgaaaaacctggtgcagacaattggcaagaactcatccaaagtatcaaagcaaagggtatgcgaccgggtgtatcattgaggccaggcactcctgtggaggaagtttttcccctggtaattgctcaatataacttctctagatcccatgctctatttccacacgcagttcataattatgacataaatgcctttcttaacatatccaataagtgctcaaactgggagtaagcttatgttcatttacactcgagctgcgcaatttgtttcatttatagttatcctgttctcagtatccaggcatattccctctgtagttctgaatcttaactcttgaacggtgatcatgtaccagtcctggttgctgtatattctgtaccactctagtggcaatatattttgcatgttatttctttgattggtaaataagcaaatcctgttcttcccatgttcaggcatagctaacttcccgttcactatatccagcattacatgtctgttttctgcagcatgacctgcatcgaagatcaagagacatttgtttaacaaaataatgatcaggtctcaagatacttgtgataaggagctagcaatttactgcctaacctttttttcctattgaattcattataatcatattgttggctagcaacttcactctcacttatctgaaactgatttctgacaatgctagttaaggctgtgggcatatcttgctctgtgagtttcacgcatcatcaattgttctattgataacaaattcttcaggtggaggcagaaaatcctgttgaattggttcttgttatgacagttgaacctggctttggtggtcagaagtttatgccagaaatgatggaaaaggtattattactgcatcaagtgccatttagtattcctgattgtttatagtttatactgtatttttgtgtatctatgttttacaactattctgatcattttgaaacatggtgcgttaggtgcgtgccctgagaaagaagtacccatcccttgacatcgaggtacaatatgttcttcacagtgtagtgtggtgcaatgttatttatgattcttgtctaaagcacactgatttaatcgtacagacgctcgggggctatttagttccattttatcaaaacatattcgtttttgttttttgttttaggttgatggtggtctgggtccttccaccattgatgtggctgcatctgctggggctaactgcattgtcgctggaagctcaatatttggagcagctgaaccaggagaggtcatatcggcactaaggaagagcgttgaaggatctcagaacaaaagctgatctgtggttttgtactcggtttctattgtaaactagggccactctgcacgtcttctttacagagatccccagattgcactacgtgagctgttgagagataataaaatgtgcccttggcagttggcactgattccagtgttactaaatgttaaaactcttgggtccgtttttgatggacaagtcacaagtaaagcttaatgatacttt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0505700, RefSeq:Os09g0505700