Os09g0508000

From RiceWiki
Revision as of 07:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0508000| Description = Conserved hypothetical protein| Version = NM_001070156.1 GI:115480054 GeneID:4347523| Length = 4519 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0508000

Description

Conserved hypothetical protein

Version

NM_001070156.1 GI:115480054 GeneID:4347523

Length

4519 bp

Definition

Oryza sativa Japonica Group Os09g0508000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20345224..20349742

Sequence Coding Region

20347774..20348082

Expression

GEO Profiles:Os09g0508000

Genome Context

<gbrowseImage1> name=NC_008402:20345224..20349742 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20345224..20349742 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgctgcgtggatccccggaggcccgggacgttgcaggcggcggaggagctccggacgagcgtggcgcggcacgccgaccggaggtcgtggccctcccggcagtcgaagccgccggcggccggcacgtcgagcttgtacacgccgttctggtccgtggtgcgctccgcctccagggacagctcctcggccatggtggagttcaccttgaagctgcactggatcagcaccctggcccctgcacagcatccatcaccatggtggccattagtggtgtggcttcagcatctcagttcttgccaaagatga</cdnaseq>

Protein Sequence

<aaseq>MCCVDPRRPGTLQAAEELRTSVARHADRRSWPSRQSKPPAAGTS SLYTPFWSVVRSASRDSSSAMVEFTLKLHWISTLAPAQHPSPWWPLVVWLQHLSSCQR </aaseq>

Gene Sequence

<dnaseqindica>2551..2859#atgtctgcaccgtcctacgaccggccggcgagggcaggccggccgccggggacgagcagccggtaggcggagtgccctctggcggcgaggccgcacctcctcgccgccacgtcgccggcggccgccgtctcctcctcctcctcctcgatctgctccagcaccctggcgaacacggcggcgtcgcacggcagctgcagcggccccgccgccgcgtacccgaacgcctcctcggcctcctccagcagcggccggaacagcgggtggttcacgctcgccgtccggacgacgaaccgctgccgcgccgcgccgacgtacaccgagaggcacccctccgccggcctcctccacgccggcggccggcaccggtccagcgtcttcatgatcaggcccctccgccctctctccgccattgccagcttcttctcggccatgcccacgctcacgtacgtatacaacagcttcctctttttagttagctagtgattacaaagttgcaaatgctccttctaatggtggcacatcgacaacttgtttacacatttagtgaaaggattaagcaagaacatgtgggaaggtgaaaggagaggtggtgaatgatatatatagatggaccaagcaaggttcttggtccaaaggccatcttttggattgggggcagatatccatggttcttgcacaattaatgatttcatatatagaatttaattacaattaaagagtagatatattgaattgaagtacaattgaagattgcatatatatagaatttaagtacaactgaagattgcatatatagcatttaagtacttggtccatggatgcagtgatttagtagtatacatgaggtacggcagcaccggaaggttaataactggagcaggagttgcaagtgtgcaaagagtgacgccatggccgacttggagaggccagtggcgtcatgtcaataatgcattagatttagctataaacacctcttgacctgtgtgcatgattgtacttagaatggaggtgtccaactccccagccacaagggttgtttagcctaaacaggattctttgttctttttctcacccaatgcaacgctccaaatggtcggttgttttgttatggattcagtcttggtcgcctagtccttgtcaactctcctcaatttgacacatctgctcctgggtctaagaatatactccgtataagtttaaccatttgttattggttgagaatatttattcagattaacagagctagatttgtgtatgttggaaccgattgctgaatagttgaatcaaactgaactttgaaatgtcatcactgcgaagtgtttccaggagccaaattacttctgaaccatgcatttttacatgatgaaacagaccgtgtcctatcttgtgtctgcttccccttttccttgtcaaactgcactgtcagttccactggaagaaatcaaaaaaccattgggcttggcaaaaaacataccatgttccatgccagtaaaatccgcgagacaagacgaagcaatcaattctgatgaactctactttcagcagtcggttagagacatatgtgtacctgttcctcgtgccatatgcaaattgggtagttactctgctggtacacgcagacgaagaaacttttccttggttcatgtctggactgaatcaggcatataccttcatgagttcacccaactgacaagttttactattttgtatctgtcaattactctctcggtttcaaaatagttgtccagtttatttcctttaggaatgaagtttaaattgtgagaaaaacggtatcaggatttctccctctattcaatgaaattggcacattctaagtgccggttcgtaaaaaaaaagagtaccaagatagtgttagcggctgcaatatcattcatcagtatataaatatgattgaaaaattagctgcagcgaggaaatattttaagacaatataccgaatactactaacaagttgccatcactacattataattatcacttccacatattcatcagcccgatgaacacggtggcaattcctgaactagctccagctacacgtgtgatgcagggagaatcatcacctacaacaatgtcacaatcacacaacctctcttgctgctaaacatgaagaatctaggattaatcttggcaagttttttttttgtactttttcaggtctaaggctgagatggtgatgcttcttgggaaggcgggaagcggtagaacggcggcggcgcggagcccgccggcgccggctggtacagcgtgaatggcaagaacggcggccgcaggaatggcaccagccagtccggcacggggaacggccacgggaacgacaccgtcccgccgccgccgcccgggagccggtacggcggccagaagagcggcaagaacggccagaagaagagcgacgagccgaacgcagcgccgccgccggcgccggcgccatcgccgccgtggcagagcgcggcgtcgcgcttggcggggcggaagttgagcgcgttgaggttgaggaagcaggcgttggtggcgcgggagcggagggcgatgtgctgcgtggatccccggaggcccgggacgttgcaggcggcggaggagctccggacgagcgtggcgcggcacgccgaccggaggtcgtggccctcccggcagtcgaagccgccggcggccggcacgtcgagcttgtacacgccgttctggtccgtggtgcgctccgcctccagggacagctcctcggccatggtggagttcaccttgaagctgcactggatcagcaccctggcccctgcacagcatccatcaccatggtggccattagtggtgtggcttcagcatctcagttcttgccaaagatgaagacaatttcatatctggtaagttactgatttttacttgttcagatttcagattgaatgcaatgatgaaatctatgaaaccagctgctcttgtgaatgatcttagctttagttttagtggcaatgtagaatgaggcattggtaatatagtgcaatgtcatactttggcaactcatagacactatgttctattaggataatgaaatcgttatttttagaacaaagccaaaaacatggaaatttctagcttgaggcagcattgtaatttgcatagcattatgagatttagaggtatatcccgctcaaaataaccgacagaaacattttttttccatttaaaaaaaagatcaaaactctgaattgaaactgtgtaacaagcacatctcagagccagttaaaacttctgtttgcaatgccagagcccagatgggtagtagaagctggatgatactgcatttatgcaattgaaggcacaatgtagtaattgtcagttgtatttcaacttcagttagtgtatgccaagctttaagtgggcctaagaaacttgagttatattgtgtgaggcatcttgtctttcatggtagcattaactaaaactaaacaacaattacaattggaccaagaaaattgaccagaccaattataaatccagaacaagccacagacacatttatgtgcaattgtgcatatgtcaacttttctctgtctcctttagattcatagggaatcaatgtactcaaaaagaagtcttgtcacgcttgcctattagttttcacttttcagtgacatcttcctagaacagaaaaaaaaaacctaatacttctaagacatcctacatgtggttgtactgtgcaatgagcaagagatttacagcatcttgtaaatctatctcagaaacaaagaataacctgctgtaaaaacactccatgtttatccaccatatttcagaacaaaccattgattgaccacaatgcagaatgacacattgatcaaaactaactctaatgcagctgagctactgtgtaacaggtatactaccatttctactcacccttcaagaagaagctgtgcttggagaaagtgttgttggagcaggcatcacagtagacagagccaaccacagtgatgttgttggacaggaacctggcctcagtgccactcaacaccagcgccattgccaagaacacggccatggctgctgctgctgctcctgagctcgccattgtcgccattgagatcagctaagctactaggaaggtgagcaatggagatcagattggagtaagagagaaagagagagaagatgagaaatggggaggagaggagaggagaggagaggaggaagaggaagcatacatgcaacagaacaaatgcatgtgaatcggcttggactggagtggagacatgggagagaggctggtcaagcactagctgctgctgtgtggtctcgtctttctttctctttttttttcccttttaaaattttatgtgtagaaataaattgggaagtctaaaatagtgcatgtgattttttttttctggggcctcatggtcataagattattagcaaacagtctgcttggatagaatactgcctccccctgcaagatcactggagtacttattgtttctgatttgtttgaatcacttgttgttttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0508000, RefSeq:Os09g0508000