Os09g0512700

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Revision as of 07:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0512700| Description = Armadillo-like helical domain containing protein| Version = NM_001070179.1 GI:115480100 GeneID:4347551| Length = 513...")
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Gene Name

Os09g0512700

Description

Armadillo-like helical domain containing protein

Version

NM_001070179.1 GI:115480100 GeneID:4347551

Length

5132 bp

Definition

Oryza sativa Japonica Group Os09g0512700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20597166..20602297

Sequence Coding Region

20597219..20597516,20597897..20597988,20599558..20599708,20600487..20600614,20600807..20600965
,20601033..20601215,20601686..20601886,20601977..20601997

Expression

GEO Profiles:Os09g0512700

Genome Context

<gbrowseImage1> name=NC_008402:20597166..20602297 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20597166..20602297 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatggcagcaagggcgcgctgctcgaggcaacccaactcccatcgcctcctcgccgtggttgtcctcgccgctattctgctccttccggtggcctccgcggcggcggcggtggtggcggcggtggcggagggggacggggtggagaaccggtcggcggcgaggcagtgggcgacggggaaggacgagggggagctggtctccggggaggagtcgaggggaggtgggtcggtggtggaggacgagttcgcgggtgggttcggctccctcgacagcatgctgcagtgggcgatcggaaattctgatccggataagttgaaagaacaggcagagggtgtgcagaaattgtctgcagatgagctgctcaagcggcgaatggagatcaaggagttgatggagaaattaaagatgccgtcagatgctgacttaatgaagattgcaattgctgacttaaataattcttccatttcactggaggatcggcagcgtgcactgcaggaactattaattctcgttgagcccattgacaatgctaatgatcttgacaaactaggaggcctcgttgctgtgattcaagatcttaataatgcaaatgaagaaataaggaccacttctgcatgggtcctgggtaaagccagtcagaataatgcccttgtccaaaatcagatcctaggttatggagctttggcaagattagtgaagatgggctatgcaacttctgcagaagaagctacaaaggcgctgtatgctatatccgctttggttagagacaatataaatggtcaggaggcatttcattcagaaaatggaagtgcaatgttgcagcacatattggcgagtaatagtgttgacgttcggcttcagaagaaggcagtgtttctagtgacagatctagcagattttcagctaaattctggaaattcaggacttcctttcttaagtgaccgtatttttcttaagtcattggttgatatgctgtcaagatttgacctcgaccttcaagaaaaggttttgttggctatcaagagcctactgaagctttcatccactgaagccacagatttcgagtcctgtgacctcagcagtgtactgtacagattgggcgtgcagttggaggagttgccatcagaagagcaaaaagagtatgctggggaggtggatgacctccggagagaagtccaaattctgttccaagacaagctcaaagagggcacaaagactgcattgtga</cdnaseq>

Protein Sequence

<aaseq>MAMAARARCSRQPNSHRLLAVVVLAAILLLPVASAAAAVVAAVA EGDGVENRSAARQWATGKDEGELVSGEESRGGGSVVEDEFAGGFGSLDSMLQWAIGNS DPDKLKEQAEGVQKLSADELLKRRMEIKELMEKLKMPSDADLMKIAIADLNNSSISLE DRQRALQELLILVEPIDNANDLDKLGGLVAVIQDLNNANEEIRTTSAWVLGKASQNNA LVQNQILGYGALARLVKMGYATSAEEATKALYAISALVRDNINGQEAFHSENGSAMLQ HILASNSVDVRLQKKAVFLVTDLADFQLNSGNSGLPFLSDRIFLKSLVDMLSRFDLDL QEKVLLAIKSLLKLSSTEATDFESCDLSSVLYRLGVQLEELPSEEQKEYAGEVDDLRR EVQILFQDKLKEGTKTAL</aaseq>

Gene Sequence

<dnaseqindica>54..351#732..823#2393..2543#3322..3449#3642..3800#3868..4050#4521..4721#4812..4832#gaatttcgaagaccttctccctctccacctcgctcctctctcctctcgtggccatggcgatggcagcaagggcgcgctgctcgaggcaacccaactcccatcgcctcctcgccgtggttgtcctcgccgctattctgctccttccggtggcctccgcggcggcggcggtggtggcggcggtggcggagggggacggggtggagaaccggtcggcggcgaggcagtgggcgacggggaaggacgagggggagctggtctccggggaggagtcgaggggaggtgggtcggtggtggaggacgagttcgcgggtgggttcggctccctcgacagcatgctgcagtgggcgatcggtacgtgcagcccgaatcccaaattctgcgattaaatctttagattcgctttgggattttgagattttgaagtgcgaaagcagcggatttcagtggcgctggcgaattttcagcccagtaatatgattgcaactagctgtgtacaaattggtttgattcgggttaattggaagtagagtgaatgagtggtagttactggagtagtattctgcacattgataatttattatagttttgtttgtgtgatgctcactttgaccacctgtagtcttaatcttaagctgttggaactagtaggctgttattgttactgaagtatgaagtttggttaattttggagacatgactgcattttgctgagttctaccttgttggtgcaggaaattctgatccggataagttgaaagaacaggcagagggtgtgcagaaattgtctgcagatgagctgctcaagcggcgaatggagatcaaggtgaaaaatactgcttcaggatccatcctctgattttgtgttgccgttggtttgtcaatgcattatcttatgacgctttctgctctttgtaacttattataatactggccatacccctagcttatagcagcagattggaacatgcttctgttcttgctgtggtttggattaccaacacatattgttctgatgccaactgagcaaactttatttcttgagcatttttcccatccttgaggaggtactatgaggtaccatgaggtacgaggtatcatgaagtaccaatctaatctaaccgttgatttagcaggggtatgatcggactaaaaaaacatgtgtactctcttcatcgtccgtgcccatccagcccaccgtcgtcgtcgtcatcgtcgccgtcgtgcatccagccggccgccgccgttgcccatccagcccgccgtcgtcgtcgccaattgaggccgccgccgccgtcgtgcatccagccggccacttgccgccgccgtcgcccatccagcccgccgtcgtcgccgccgtcccccatccagccggccgtcgtcgtcgccaatcgaggcttccgccgccgtcgcccatccagcccgccgtcgtcgtcgccgtcgtcgtcgtcccccatccagcccgccgtcgtcgtcgtcgccaatcgaggctgccgccgccgtcgtgcatccagccggccgctggcgtcgcgcatccagccaccgctgtcccgcatccagccgctcgccgccgccgtgcatccagccgcccccgccgccgcgcgtccgtccgcccgccgccgtccccctcgagcccgccgcgtccagccccctccagccgccgcgcgtcccgccgccgccgcgcgtccgtccgctcgctgtcgcccccctcgagctcgccgcgtccagccccctccagccgccatgcgtcccgccgctgccgtgcgtccgtccgctcgccgtcgtccccctcgagcccgccgcgtccagccccctccagccgccacgcgtcccgccgccaccgccgccgtccagcccgccgccgccgtcacgcgtccaggcgcccgccgccgtccccctcgagccagccgccacgccgctgctgtgctctcccgacgttttttctctctcatgaaacagtaaaggacataaataccctcccacccataataccacttcaatgaggaggtgcagtaccatgaggtacggatgatttctaaccgttggatgatgccagatcaatggtcaggatttggtactgcacaacctcaaggacagtaaaaaacctcttatttcttacattattatgccatcaatgctgtcataagagtgatattcatggaggtatcccaaatcaataacatgctctcagttagattttgtaaatttttattttatccgtgccttacgttgcactgttattgatcaaataaaaatagaacaatttatcacactcatgtaaccggatgatatgggctcctaattgctggtgatccttctctgcatagatgaaagacaaagcgtaagaatgttttcatgacatggccgtgttgaacccattgaatttttcttgcaggagttgatggagaaattaaagatgccgtcagatgctgacttaatgaagattgcaattgctgacttaaataattcttccatttcactggaggatcggcagcgtgcactgcaggaactattaattctcgttgagcccattgacaatgctaatggtaaacatgctctagtccatctgaatactatccactcagactcagtgctctgcacatcaagaaaaatatattcttataactttataagtacctcagattgaaaaatctaacttttggccttgtagatgtaggtgtcagtaatattatagtttttcttgtcatagcgattgttttagactaaggccgagtttagtttcaaactttttttttcaaacttccaacttttccatcatatcaaaactttcctacacacacaaacttccaacttttccatcacatcgttccaatttcaaccaaacttccaattttcgcgttaactaaacacaccctaatagtgatttaccgaggtactccaagcccaagcgtcacatatgtgtgactgaatgactgtgtatagttactagttttcaccaaaaaaaaaatccatgcttttttaatacaatgctcaaatccaatcttgaagttgcttgcttgtatttctgataagccagcagcattttcttttttttttaacaatgcaacttcaacttgcgaatatatttttcaaagtaataaatggcatgccaacatatggttcttaaatttgatgataaaaggcactggtagcctgttaatgaatgaacatgattcaacttatgaaaaaaattcaaaataaaaaggaagtgcatgccaacatgcaaaactctgttccatttgatgaagcaagggcttatatttgtgcatgcagttcttagaatagtgatgttctaaaatatatgtttcttgtgtttattatcagatcttgacaaactaggaggcctcgttgctgtgattcaagatcttaataatgcaaatgaagaaataaggaccacttctgcatgggtcctgggtaaagccagtcagaataatgcccttgtccaaaatcaggtatcttcttgtttgttcgtcgaatctgcatcattgttgtttataaactttatgcagtgtccttagtggatataccttttaatagtcacttctcttgtgtggttaagctcagggagtagtgattcctctttgttgaaacttgaacacacttttgatcattgttatcaaactcgatgtttcatccttggccagatcctaggttatggagctttggcaagattagtgaagatgggctatgcaacttctgcagaagaagctacaaaggcgctgtatgctatatccgctttggttagagacaatataaatggtcaggaggcatttcattcagaaaatggaagtgcaatgttgcaggtagttaaaacctggtcttgataatattagcatttttgttttagttgtgacatttccctttttgcagcacatattggcgagtaatagtgttgacgttcggcttcagaagaaggcagtgtttctagtgacagatctagcagattttcagctaaattctggaaattcaggacttcctttcttaagtgaccgtatttttcttaagtcattggttgatatgctgtcaagatttgacctcgaccttcaagaaaaggtattatctgtggttctgtactgcttccagttctgtacttccttgtggttagcactgcttagcagcaaaattcttcactcgtcatcagagttgttgctgcttatgtgcaataatttgctgatttcttggtttatttgatatgcccgtactggaatgtgtgctgttcctcatataaggacttctgtcatatgtcaagagatgcatatgagcaacacaactttctgtctggaatctgttctttcagtttccatgagttacttatttgcttggattttaccagccatttccttcatagcttttactattatatactcaatctgatgttctgcacaaaaaggtctagaaatgtttgcttgtgtccaaggatgggagtaatgtttactccaattgacaaaaaattacaatgggctgtaaagtttgcctgttacaacataacgattgatcttgctctgtttttgcgtgtcatgtaggttttgttggctatcaagagcctactgaagctttcatccactgaagccacagatttcgagtcctgtgacctcagcagtgtactgtacagattgggcgtgcagttggaggagttgccatcagaagagcaaaaagagtatgctggggaggtggatgacctccggagagaagtccaaattctgttccaagacaagctcaaagaggtaaacaaatcacctcgcgcagttgctactgtaattgaggtggtgcgattacctgagctaacgtagcttctcttctgttataacctgcagggcacaaagactgcattgtgatgatattaggacgaattaacgacggatgtagtatgcaatggaggcattaaatttttcaggagtatagttgatgtttggggccattcttgcagtgatcagaatcctcagaggatcaaatggagtcatggaatatttatctgtggatcttcggccaggtggtgacatagtgtctgtaggatttgatgtaatcgtaggttaggattattaactgtatggcttcttttcctgaagctacctatggttaattcatcattccctgcactatattttaaccactgcaatgaagcaaattttcccctt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0512700, RefSeq:Os09g0512700