Os09g0520800

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Revision as of 07:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0520800| Description = Glycoside hydrolase, family 29 (alpha-L-fucosidase) protein| Version = NM_001070238.1 GI:115480218 GeneID:4347611| L...")
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Gene Name

Os09g0520800

Description

Glycoside hydrolase, family 29 (alpha-L-fucosidase) protein

Version

NM_001070238.1 GI:115480218 GeneID:4347611

Length

1744 bp

Definition

Oryza sativa Japonica Group Os09g0520800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21091800..21093543

Sequence Coding Region

21091871..21092558,21092639..21092878,21092967..21093523

Expression

GEO Profiles:Os09g0520800

Genome Context

<gbrowseImage1> name=NC_008402:21091800..21093543 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21091800..21093543 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgggtcggtgcgcgtcgccgctttgcgctctcgccgccgcgctgatcgccgccgttgtggcggccacatcgtcgtcgttggcggaggcgacggcgacgccgccgctgccggtgctgccggtgccgacggcggcgcagctgaggtggcagcggcgggaggtgatcatgttcttccacttcgggatgaacacgttcacggactccgagtggggcacggggcgggagccgccggcggcgttccgcccggcggcgctggacgcgtcgcagtggatggacgcggcggccgcggcgggcgcgtcgctcgtcgtcctcgtcgccaagcaccacgacgggttctgcctctggccgtccgcgcacacggcgcactccgtccgcgccagcccgtggcgcggcggccgcggcgacgtcgtgcgggagttcgccgacgccgcgcgcgcccgcggcctcgacatcgggatctacctctcgccgtgggatcgccacgacaagcggtacggccgcgaggtcgcctacaacgagtactacctcgcccagctccacgagctcctcactgggtacgggagcgtgtcggagatatggttcgacggcgccaaggggaagaacgcgacgaacatgacgtaccatttccaggagtggttccagacggtgcggcagctgcagagctccatcaacatcttctccgacgacggccccgacctccggtgggtcggcgacgagaatggctccgccggatccacctgctggtccaccatcaaccgctccaagatcaccatcggcgaggccggcatcgagaagtacctgaacaccggcgacccgagggggaaggactgggtgccgccggagtgcgacgtgtcgatccggccggggtggttctggcacaagaacgagacggcgaagccgctgccggagctgctcgaggtatactacaactcggtgggccgcaactgcgtgctgctgctgaacgcgccgccgaacaccacgggcctcgtcgacgccgccgacatcgccaggctgcgcgagttccgcaccgccgtgacggccatcttcggcaccgacctcgccgcgggcagcgcggcgagggcgagcagcgagcgcggcggcaggttcgcggcggccaacgtgctcgacggccgcgacgacacgtactgggcaccggccgcggcggaggcggaggacggcggcgggtactggatcgagctgcggcggccggcgtcggcggcggcgaggaagttcaacgtggtgaggatccaggagcacgtggcgatggggcagcgggtggagcggcacgaggtgtacgtggacggcggcggcgcggcggtggcgagcggcacgacggtggggcacaagcggctgcacaggctgggcgcccccgtggcggggcggacggtgagggtgtggctggcgtcgcggcgaggcccgccgctgctgtcggcggtggggctccacctcgaccccttcgccgccggcgggggcacgatgtga</cdnaseq>

Protein Sequence

<aaseq>MMGRCASPLCALAAALIAAVVAATSSSLAEATATPPLPVLPVPT AAQLRWQRREVIMFFHFGMNTFTDSEWGTGREPPAAFRPAALDASQWMDAAAAAGASL VVLVAKHHDGFCLWPSAHTAHSVRASPWRGGRGDVVREFADAARARGLDIGIYLSPWD RHDKRYGREVAYNEYYLAQLHELLTGYGSVSEIWFDGAKGKNATNMTYHFQEWFQTVR QLQSSINIFSDDGPDLRWVGDENGSAGSTCWSTINRSKITIGEAGIEKYLNTGDPRGK DWVPPECDVSIRPGWFWHKNETAKPLPELLEVYYNSVGRNCVLLLNAPPNTTGLVDAA DIARLREFRTAVTAIFGTDLAAGSAARASSERGGRFAAANVLDGRDDTYWAPAAAEAE DGGGYWIELRRPASAAARKFNVVRIQEHVAMGQRVERHEVYVDGGGAAVASGTTVGHK RLHRLGAPVAGRTVRVWLASRRGPPLLSAVGLHLDPFAAGGGTM</aaseq>

Gene Sequence

<dnaseqindica>986..1673#666..905#21..577#aacacaaaacgggagaagagatgatgggtcggtgcgcgtcgccgctttgcgctctcgccgccgcgctgatcgccgccgttgtggcggccacatcgtcgtcgttggcggaggcgacggcgacgccgccgctgccggtgctgccggtgccgacggcggcgcagctgaggtggcagcggcgggaggtgatcatgttcttccacttcgggatgaacacgttcacggactccgagtggggcacggggcgggagccgccggcggcgttccgcccggcggcgctggacgcgtcgcagtggatggacgcggcggccgcggcgggcgcgtcgctcgtcgtcctcgtcgccaagcaccacgacgggttctgcctctggccgtccgcgcacacggcgcactccgtccgcgccagcccgtggcgcggcggccgcggcgacgtcgtgcgggagttcgccgacgccgcgcgcgcccgcggcctcgacatcgggatctacctctcgccgtgggatcgccacgacaagcggtacggccgcgaggtcgcctacaacgagtactacctcgcccagctccacgagctcctcactgggtcagtgacacgcttgacacactcacacacgtcgccgccgccgccgccattgctgacgtcgatcgagcttgatgtgtttggttgtcaggtacgggagcgtgtcggagatatggttcgacggcgccaaggggaagaacgcgacgaacatgacgtaccatttccaggagtggttccagacggtgcggcagctgcagagctccatcaacatcttctccgacgacggccccgacctccggtgggtcggcgacgagaatggctccgccggatccacctgctggtccaccatcaaccgctccaagatcaccatcggcgaggccggcatcgagaagtaggtaacactacactaaacacgcgttaattagttcggtggccaccgtcgtcccgccattgctgacatcacccacccaggtacctgaacaccggcgacccgagggggaaggactgggtgccgccggagtgcgacgtgtcgatccggccggggtggttctggcacaagaacgagacggcgaagccgctgccggagctgctcgaggtatactacaactcggtgggccgcaactgcgtgctgctgctgaacgcgccgccgaacaccacgggcctcgtcgacgccgccgacatcgccaggctgcgcgagttccgcaccgccgtgacggccatcttcggcaccgacctcgccgcgggcagcgcggcgagggcgagcagcgagcgcggcggcaggttcgcggcggccaacgtgctcgacggccgcgacgacacgtactgggcaccggccgcggcggaggcggaggacggcggcgggtactggatcgagctgcggcggccggcgtcggcggcggcgaggaagttcaacgtggtgaggatccaggagcacgtggcgatggggcagcgggtggagcggcacgaggtgtacgtggacggcggcggcgcggcggtggcgagcggcacgacggtggggcacaagcggctgcacaggctgggcgcccccgtggcggggcggacggtgagggtgtggctggcgtcgcggcgaggcccgccgctgctgtcggcggtggggctccacctcgaccccttcgccgccggcgggggcacgatgtgacgtcacaaaaacagtagtaatatggaataatttggtgagatataatatcatcatgagcaataattggtttg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0520800, RefSeq:Os09g0520800