Os09g0524800

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Revision as of 07:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0524800| Description = Ubiquitin domain containing protein| Version = NM_001070251.1 GI:115480244 GeneID:4347626| Length = 2372 bp| Defini...")
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Gene Name

Os09g0524800

Description

Ubiquitin domain containing protein

Version

NM_001070251.1 GI:115480244 GeneID:4347626

Length

2372 bp

Definition

Oryza sativa Japonica Group Os09g0524800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21326182..21328553

Sequence Coding Region

21326612..21326956,21327049..21327195,21327274..21327530,21327654..21327909

Expression

GEO Profiles:Os09g0524800

Genome Context

<gbrowseImage1> name=NC_008402:21326182..21328553 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21326182..21328553 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgcgcgccaaggcgaaaggtacattcccaccggcggcggcggcgatgaaggagagctctgctcctccgccgcctgctgctgcggcggcggcggcgagggaggatgagtgggaggtgcggccaggtgggatgctggtgcagaagaggagcccggacggcgacgccccggccgcgcccgtgcccaccatccgcgtcaaggtcaagttcaacggcgtctaccacgagatctacatcaactcgcaggcgtccttcggtgagctgaagaagcagctgtcggcgccgacggggctgcacccggaggaccagaagatcgtttacaaggacaaggagagggactccaaggcgttcctcgacatggccggcgtcaaggaccgctccaagatggtgctcctcgaggacccaacggcgcaggccaagcgcctcctcgagcaacgccgcaccgacaaggccgagcgcgccgccaagtccatctcccgcatcagcctcgacgtcgacaagctcgccaccaaggtgacggctctggaggccatcgtcggcaagggcgggagggtggtcgacgccgacgtggtcacgctcacggaggcgctgatgaacgagctggtcaagctggacgccatcgccgccgagggcgaggtcaaggtgcagaggcgaatgcaggagaagcgggtgcagaagtacgtggagtcgctggacgccatccgcgccaagaacgcggcgtcgcacaacaaggccagcggcaacggccacgccaagccccgggcgccgcacctcccgccgccggtgtcgcagcggcggcagttccaggcgccgccgcccgccgcgccaacgacaacgaagaccgccgccgcgccggcgccgccgcccacggcgagctgggagtcgttcgacctgctgtcctcgatgccgtccacgtcgtcgtccaccgtgacgaccaccatggccgccgcgacgaccaccaccaccacctcgccgatcccgcggttcgattgggagctcttctag</cdnaseq>

Protein Sequence

<aaseq>MMRAKAKGTFPPAAAAMKESSAPPPPAAAAAAAREDEWEVRPGG MLVQKRSPDGDAPAAPVPTIRVKVKFNGVYHEIYINSQASFGELKKQLSAPTGLHPED QKIVYKDKERDSKAFLDMAGVKDRSKMVLLEDPTAQAKRLLEQRRTDKAERAAKSISR ISLDVDKLATKVTALEAIVGKGGRVVDADVVTLTEALMNELVKLDAIAAEGEVKVQRR MQEKRVQKYVESLDAIRAKNAASHNKASGNGHAKPRAPHLPPPVSQRRQFQAPPPAAP TTTKTAAAPAPPPTASWESFDLLSSMPSTSSSTVTTTMAAATTTTTTSPIPRFDWELF </aaseq>

Gene Sequence

<dnaseqindica>1598..1942#1359..1505#1024..1280#645..900#gagcgatggtggaagtggcaagtttggccgagacgagacgacacgacggttgcttccttcctaaccaactccccaaccaagcctccctccctcgccggagctctcgccaccccgcggccgccgccgccgccgcgaaacggagcatttggttaattgcattgcgtccgcgttgggtttgcgttgcatggtcacgcgcgcgcacgcacgcacgcggctttgggttttttttggcgcataaatattccgcggctgctgctgctgctgccgcttcctgcctgtccctgagttgtacccgctctattttttttttctctctctttcttctccatctctcctccttccttcctaacctctccccacctacctccctgccgcctgatcctgatttccccaattgaggccagcgtcgagcacctgcacacacgcacacgctcgctgctgcgcctcgattctcgtcccagatccgccactcccttccccaattcgccgtcacctgcagctgagtgttgcttgctcgagctagctggtggttcttgccttgcagggcgaggcagtggtagcttgcgagctttagctgcgggagcggttggctttggttttggtttggtaaattggttgcgtgtgcgtgtgcgtgccatgagaagatgatgcgcgccaaggcgaaaggtacattcccaccggcggcggcggcgatgaaggagagctctgctcctccgccgcctgctgctgcggcggcggcggcgagggaggatgagtgggaggtgcggccaggtgggatgctggtgcagaagaggagcccggacggcgacgccccggccgcgcccgtgcccaccatccgcgtcaaggtcaagttcaacggcgtctaccacgagatctacatcaactcgcaggcgtccttcggtaatgcacgcgcctcgcctcgccgccggcggcgtgcgagcgcggcgtctggtttttttttttttttgggggaggggtgtgattcggtcgagcaggtgctgatggtggtggttggtggtgcaggtgagctgaagaagcagctgtcggcgccgacggggctgcacccggaggaccagaagatcgtttacaaggacaaggagagggactccaaggcgttcctcgacatggccggcgtcaaggaccgctccaagatggtgctcctcgaggacccaacggcgcaggccaagcgcctcctcgagcaacgccgcaccgacaaggccgagcgcgccgccaagtccatctcccgcatcagcctcgacgtcgacaagctcgccaccaaggtaatcaatcaccacaatttgcggcggcgcggcttcaatttggttccgaattagctgaattgggcggtggtcttgcaggtgacggctctggaggccatcgtcggcaagggcgggagggtggtcgacgccgacgtggtcacgctcacggaggcgctgatgaacgagctggtcaagctggacgccatcgccgccgagggcgaggtcaaggtgcagaggcgaatgcaggttagcacacgaactccaaaccgattctcgtcgccgtttcttgcccgattgatttccggcgagctcaatttccgacgaacgtcacgtcgcaggagaagcgggtgcagaagtacgtggagtcgctggacgccatccgcgccaagaacgcggcgtcgcacaacaaggccagcggcaacggccacgccaagccccgggcgccgcacctcccgccgccggtgtcgcagcggcggcagttccaggcgccgccgcccgccgcgccaacgacaacgaagaccgccgccgcgccggcgccgccgcccacggcgagctgggagtcgttcgacctgctgtcctcgatgccgtccacgtcgtcgtccaccgtgacgaccaccatggccgccgcgacgaccaccaccaccacctcgccgatcccgcggttcgattgggagctcttctagctcgctctcgctctccctctcctcctcctccgatgggtacactactctacactacactacactacacacttcaccttttctttgtccattcatctcgtgagctcattcgatcggtcgcactagcacctgatcgatcagcagcgctcgccattgtttctttgatttcttctgttcattcttcctcttctttcttttttcttcatgttccttttttcatttcgagagtatatctacaaaaacaaaaaagaagaaacaccatgggtgatcgagtgtgttcagtacgtatgtcatcactcaagtcagttcatcaatccaatgcatggtcagtcacacagccaaaaaagaaaaaagtgggtggtatcatgacgaagaattttccggtgacactatatatatacaaaaaaaacagcatgtatatgtgattcgaaac</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0524800, RefSeq:Os09g0524800