Os09g0532400

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Revision as of 07:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0532400| Description = CheY-like domain containing protein| Version = NM_001070295.1 GI:115480332 GeneID:4347674| Length = 4595 bp| Defini...")
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Gene Name

Os09g0532400

Description

CheY-like domain containing protein

Version

NM_001070295.1 GI:115480332 GeneID:4347674

Length

4595 bp

Definition

Oryza sativa Japonica Group Os09g0532400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21716840..21721434

Sequence Coding Region

21717231..21717323,21717424..21718090,21718446..21718767,21718897..21719035,21719709..21719861
,21719987..21720117,21720210..21720371,21721095..21721299

Expression

GEO Profiles:Os09g0532400

Genome Context

<gbrowseImage1> name=NC_008402:21716840..21721434 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21716840..21721434 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggggtggagtggaggagaggaaggtggtggacttggaggacggggacggggaggaaggggaggatgcggcggcggtggcggcggggtcgagcagggagacgcggatgctgccgaggatgccggtgcgggtgctgctcgctgagggcgacgactccacgcgccacatcatctgcgcgctgctccgcaagtgcgggtatcgagttgccgcagcctctgatggtgtgaaagcgtgggacatactaaaggaaaaatctttcaatatagaccttgttttaactgaagttgaacttcccttgatgtctgggttcctgctgctctccacgatcatggaacatgacgcatgcaagaatatccccgtcataatgatgtcttcaaatgattccgttagcatggttttcaaatgcatgctaaagggtgctgcagatttccttgttaagccaatacggaagaatgaattaaggaacttatggcagcatgtttggagaaaacaactgtccagcggtgttcttgatgtgcagcatactcaacaagaagataatcttacagaaaggcatgagcagaagaccggagtgacgaaagctgaacatgtgactgaaaatgttgtccacaagaacatggaatgcagtgaacaagaaagtgatgctcaaagttcatgtacaaggtcagaactggaggctgacagtaggcaaaccaacaatttactggaatataagcagccaatgggaaggcatttctccaagcctgaccacaagaacaccgagaaaaatggagggactaaaattcatgcatctaatgatggcaacttgattccacggagggaagaggatgcatcactgaggaggatgacatgttcaaatgatattaattgtgagaaagcttccagggatatggagctggttcatattattgacaatcagcagaagaataacacacatatggagatggatgttgcgagagcaaattcccgtggaaatgatgacaagtgcttttccattccagcacaccagttagaactttctctcagaagatctgactacagtagattagagagccaggagaaaaatgaacgaagaacactgaaccactcaacttcatctccattttccttgtacaactgcaggacagcatcatctaccattaatgctggtgatgctcaggcatgcagcacctcggcaacacatatagatcttgaaaacaaaaatggagattccaaaactccctctcaagacaagagggaaacaaaccaacctcccattagagttgtaccatttcctgttcctgttggaggactaacatttgatgggcagccattctggaacggtgcacctgtggcatcccttttctatccacaatcagctcctcccatttggaatagcaaaacatctacctggcaagacgcaaccacacaagcaatttctctgcagcagaatggtccaaaagatacggatactaagcaggttgaaaatgtagaggaacaaactgctcggagtcatctaagtgctaatcggaaacatctccgcattgaaattcctacagatgagccgcggcatgtttctccaaccaccggtgaaagtgggagcagcactgtgctggacagcgccagaaaaacgctcagtggcagtgtctgtgacagctcttccaaccacatgattgcccctactgaatcatcaaatgttgttcctgaaaatcctgatggtttacgccacctgagccaacgagaggctgcactgaacaagttccggcttaagaggaaagacaggtgctttgagaagaaggtgcgataccagagcaggaagctactagccgagcagcgaccgcgggttaagggtcagtttgttcggcaagatcatggtgtccaagggagctag</cdnaseq>

Protein Sequence

<aaseq>MGGGVEERKVVDLEDGDGEEGEDAAAVAAGSSRETRMLPRMPVR VLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS GFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQH VWRKQLSSGVLDVQHTQQEDNLTERHEQKTGVTKAEHVTENVVHKNMECSEQESDAQS SCTRSELEADSRQTNNLLEYKQPMGRHFSKPDHKNTEKNGGTKIHASNDGNLIPRREE DASLRRMTCSNDINCEKASRDMELVHIIDNQQKNNTHMEMDVARANSRGNDDKCFSIP AHQLELSLRRSDYSRLESQEKNERRTLNHSTSSPFSLYNCRTASSTINAGDAQACSTS ATHIDLENKNGDSKTPSQDKRETNQPPIRVVPFPVPVGGLTFDGQPFWNGAPVASLFY PQSAPPIWNSKTSTWQDATTQAISLQQNGPKDTDTKQVENVEEQTARSHLSANRKHLR IEIPTDEPRHVSPTTGESGSSTVLDSARKTLSGSVCDSSSNHMIAPTESSNVVPENPD GLRHLSQREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQDHGVQGS</aaseq>

Gene Sequence

<dnaseqindica>4112..4204#3345..4011#2668..2989#2400..2538#1574..1726#1318..1448#1064..1225#136..340#attttcctagtggcgagctcgaggagagagagagaggaggaggagaggtggttgcgccttgcgcggtgaaagggtagttaccgccgcgggcgactccggcgaggaggggcgaggggcggagctagcggcgggggaatggggggtggagtggaggagaggaaggtggtggacttggaggacggggacggggaggaaggggaggatgcggcggcggtggcggcggggtcgagcagggagacgcggatgctgccgaggatgccggtgcgggtgctgctcgctgagggcgacgactccacgcgccacatcatctgcgcgctgctccgcaagtgcgggtatcgaggtgagcgtctgtgccgcacagtttgtttttgatccggttaaattggttgactgcttttgttcattgttttttgctcgaattgttgtcacgagtggctaatctcactagtgaagttgcaaagttgcggatgtttctgcgctgtaaaactgttactacgtggcagctgattttactggattagacctcaagtggggagatttgggatgtgacgatttgtgatctgttttttttttcagaagatatgttaatcaatatgctgattttggtctgtagttgtaattccttgctatctgtctctttttctttattttgccagagctgcttcagtagacgaaatttggtgtagtgcagcctattcgtcaggaatacctaagttgaggcattaccgaatatcatttttttttcgaaaaaaatatagctgtattttaacgatccatttcgtatcttgtgttaaattgaaataactacacatgtatatttgtttttttcctgaagcaaaatgtttacctgtatatttgatccttttttgggacagagttagagctgaaaaatgcagtttcctcttttaaaacaaaaaaaaagcaaatttattttaaagtacagttatttaggcacgttccttcttttttgatctcttggtttgttcgcgtattctctgggatcttggttaaattatactattgtgtttttcgtcgatcttatgcaacatatttggtcttgcagttgccgcagcctctgatggtgtgaaagcgtgggacatactaaaggaaaaatctttcaatatagaccttgttttaactgaagttgaacttcccttgatgtctgggttcctgctgctctccacgatcatggaacatgacgcatgcaagaatatccccgtcataagtatgtatccaacttgactctatgccatgcctttctcatatctttctaatcccattactccatctgatgcttcatttttctattggtctcagtgatgtcttcaaatgattccgttagcatggttttcaaatgcatgctaaagggtgctgcagatttccttgttaagccaatacggaagaatgaattaaggaacttatggcagcatgtttggagaaaacaactggtaagatcacatatttgcaacgttttagcatgactacatttgctttctcgtttttatatattaaaatttggattctgcatttttcacaaaactaatcaacaaacttcaattactctgttttacagtccagcggtgttcttgatgtgcagcatactcaacaagaagataatcttacagaaaggcatgagcagaagaccggagtgacgaaagctgaacatgtgactgaaaatgttgtccacaagaacatggaatgcagtgaacaagaaagtgatgctcaagtaagttttagaatcagttaacatgacgttgtctacctgttctttcttcttcctgctcatgtgtgcccaaagatagtcttgcgtacaaaatttcaatcattagccacgtatgggatttgtgctgtatcattttgcattgcccagctatgaccgaactgtaacacttccatcacctgatgttttggccaaaagcagtttcattacccacacgataaaaatggtattacttcatgcaaaagatgtatttagcccttcagatctgcatcaatgttggtgaactaatttatcaatttttcaagtcaggtgggtaatggaactgtgttttgagtgagaatagtattttcttgtcagcgaaatgtcacagttcggtcctcttgggtattgcaaaatggagtacatatgacaacagtaaggtaagtttttttggctgcttgcaggatcagaatacggtccacacgaacagtttgataaagcctattacggaatacttgtttgtttcaagtactggatatttgatgttacacacttgaactgaatctgtagcatgttattgtcttcaagacatcatactgcatagtctttatatccttagcagtagggactgtcgttattatgctgagttcagatctgttcgctgttgttcgtggactgaattttggatcccctcttgcagagttcatgtacaaggtcagaactggaggctgacagtaggcaaaccaacaatttactggaatataagcagccaatgggaaggcatttctccaagcctgaccacaagaacaccgagaaaaatggagggactaaaattcatggtaataaaacatccttcattcttttctctgttatttccatatcattcttctacactgaaagtggtcatatcatcaattatcttttgaatgcattttttttcctgatattacctcctcctcgttttgcagcatctaatgatggcaacttgattccacggagggaagaggatgcatcactgaggaggatgacatgttcaaatgatattaattgtgagaaagcttccagggatatggagctggttcatattattgacaatcagcagaagaataacacacatatggagatggatgttgcgagagcaaattcccgtggaaatgatgacaagtgcttttccattccagcacaccagttagaactttctctcagaagatctgactacagtagattagagagccaggagaaaaatgaacgaagaacactgaaccactcaacttcatctccattttccttgtaagtgtttcttactgtaacgtttattctgtcattcctaatttgtgcatggttgttatgttcgcgttgatgtatttttcctactggtataacagaaaaaaaatatcgtctttgatatttcatcatttatttacctaccatcatgcgtagacatattttactttgatttgctacagtatggtcttgcaagcatagaataaaacatgaaataatatggaagtagcagaaatttttgtatgatctctctttttgtgcatttagataatctaacttactggttaacttgctcctttacacagttttaccaagagccaacatatgagatctcacacttccgatcatttcttgttcataggtacaactgcaggacagcatcatctaccattaatgctggtgatgctcaggcatgcagcacctcggcaacacatatagatcttgaaaacaaaaatggagattccaaaactccctctcaagacaagagggaaacaaaccaacctcccattagagttgtaccatttcctgttcctgttggaggactaacatttgatgggcagccattctggaacggtgcacctgtggcatcccttttctatccacaatcagctcctcccatttggaatagcaaaacatctacctggcaagacgcaaccacacaagcaatttctctgcagcagaatggtccaaaagatacggatactaagcaggttgaaaatgtagaggaacaaactgctcggagtcatctaagtgctaatcggaaacatctccgcattgaaattcctacagatgagccgcggcatgtttctccaaccaccggtgaaagtgggagcagcactgtgctggacagcgccagaaaaacgctcagtggcagtgtctgtgacagctcttccaaccacatgattgcccctactgaatcatcaaatgttgttcctgaaaatcctgatggtttacgccacctgagccaacgagaggctgcactgaacaagttccggcttaagaggaaagacaggtgctttgagaagaaggtaggtcacaagcaactaatcttgccattttattccaatccaatttgttgtattgctgaatagtagaaactgtggtttacatttttacattgctgtgcaggtgcgataccagagcaggaagctactagccgagcagcgaccgcgggttaagggtcagtttgttcggcaagatcatggtgtccaagggagctagggctgtccaaacttcaggagattgctgtgccacggttatcctggtggtcagtgtcagattttgtttgaagagtgaaagtatgattgccctgacctacagtcagcagtgtatggtggtgttgcatatatatacaggctaacttcgtgtgctaggttaggccatggacctcgtacattgtagagtttgtcagtagggatcatattttgcttcagatctagataagctgcgtttatcatgtagcacacgtatttatgttttctaaattgtatctagccaacagttaacgtgtaagctggacgtgtgtggatgtaaggtgtcaaggatatccaaagacaaagttcttttgtacagtttcttacactgaacatcgttggtgtagtttcatactttc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0532400, RefSeq:Os09g0532400