Os09g0532800

From RiceWiki
Revision as of 07:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0532800| Description = Protein prenyltransferase domain containing protein| Version = NM_001189025.1 GI:297727180 GeneID:9271537| Length = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0532800

Description

Protein prenyltransferase domain containing protein

Version

NM_001189025.1 GI:297727180 GeneID:9271537

Length

3014 bp

Definition

Oryza sativa Japonica Group Os09g0532800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21737108..21740121

Sequence Coding Region

21737110..21738340,21739573..21739700,21739786..21739986

Expression

GEO Profiles:Os09g0532800

Genome Context

<gbrowseImage1> name=NC_008402:21737108..21740121 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21737108..21740121 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcccacgccatcacggcctcgccgatgctcccgtcgccaccggcgccgccgccgatctcgccggcgcggctgcacaagctcgtgacctcccagtcggacccgctcctcgcgctcgagctagtcaccgtcaccgcgccgaccaccgcgccccacccgtcgacgctccacgcgctcgcgctccgcctctcccgccgccgcgaacacctcccccacgcgctcgcgctcctgcgccgcctcccgtcgccgccctccccgcggatcctcctcccgctgctcctctccgcgctccgcctccgccggcagcctcacctcttcctctccaccttcaactccctcttcgtctccggccccagcccgttgccgctccaccccgagcttctcctccgcctcctctccgttctctcctccaccgcttcctacttcccgtgcgcgctacacctcctccgcgacgtctccacccgccttcccctccccgagccgctcgtcctcgcctcgcacaacctgctcatcgaagccgccacccgctccggccacctcgccgtgtcaatctccctcttccatcgcctccgctccctccatgtgtctcccaacgccgagacataccgcatcctgacccagtcactctgccgcaggggccaggtccacactgcggccaccctgctcgacgaaatgctccacaggggcatccctgctgacccactggcatacaccaccgtgctgaatgcgctctgccgtaagaagcagcttcgagaggcttaccgcttgctgtgcctcatgcgaggccgtggggtctcacctgacattgtacattacaacacggtcatcgtcggagtgtgtcgtgagggacggccactggatgcctgcaaggtgttcggagatatgagggagagtgggtgcgcgccaaatgcggtgacatatactgcggtggtgaatgggttgtgtgtgaatggattatatgacaaggcagaggcataccttgatgatatgttgggcaaagggttactaccacatttctctgtgttacattcagtgattaagggatgctgtgcagttgggaaggttaatgaggctgcagggatgatgactcgaatgcttgatcttgggatggttccacatgctgagacctggagttcagtgatcaggagtgtttgtagtgatgaggataatgtcgaggtggttttgttgcaagtgatgaaaggaataaagcaccgctcaaacataaattcaaggaaagaggaagttgagtacagagtgcgcaatgttctggccagtgttgaatcatctctctctaatgcatcatacctatcgggaaaccctcctgagatagtggtttggagtgcctcattgtatgactacaagaatccgagggaattgtcaacatcacacaaccaatttttgaaggaaaaattaccgatgaacacacctcttgctgccccgtctttacctgctctgaacatagagatagagacaggtgtatttcagttctctttttttttttggttagtgattatatccttgatcatttttggtgtgtgcattgtgatacttgtgggctactag</cdnaseq>

Protein Sequence

<aaseq>AHAITASPMLPSPPAPPPISPARLHKLVTSQSDPLLALELVTVT APTTAPHPSTLHALALRLSRRREHLPHALALLRRLPSPPSPRILLPLLLSALRLRRQP HLFLSTFNSLFVSGPSPLPLHPELLLRLLSVLSSTASYFPCALHLLRDVSTRLPLPEP LVLASHNLLIEAATRSGHLAVSISLFHRLRSLHVSPNAETYRILTQSLCRRGQVHTAA TLLDEMLHRGIPADPLAYTTVLNALCRKKQLREAYRLLCLMRGRGVSPDIVHYNTVIV GVCREGRPLDACKVFGDMRESGCAPNAVTYTAVVNGLCVNGLYDKAEAYLDDMLGKGL LPHFSVLHSVIKGCCAVGKVNEAAGMMTRMLDLGMVPHAETWSSVIRSVCSDEDNVEV VLLQVMKGIKHRSNINSRKEEVEYRVRNVLASVESSLSNASYLSGNPPEIVVWSASLY DYKNPRELSTSHNQFLKEKLPMNTPLAAPSLPALNIEIETGVFQFSFFFWLVIISLII FGVCIVILVGY</aaseq>

Gene Sequence

<dnaseqindica>3..1233#2466..2593#2679..2879#gagcccacgccatcacggcctcgccgatgctcccgtcgccaccggcgccgccgccgatctcgccggcgcggctgcacaagctcgtgacctcccagtcggacccgctcctcgcgctcgagctagtcaccgtcaccgcgccgaccaccgcgccccacccgtcgacgctccacgcgctcgcgctccgcctctcccgccgccgcgaacacctcccccacgcgctcgcgctcctgcgccgcctcccgtcgccgccctccccgcggatcctcctcccgctgctcctctccgcgctccgcctccgccggcagcctcacctcttcctctccaccttcaactccctcttcgtctccggccccagcccgttgccgctccaccccgagcttctcctccgcctcctctccgttctctcctccaccgcttcctacttcccgtgcgcgctacacctcctccgcgacgtctccacccgccttcccctccccgagccgctcgtcctcgcctcgcacaacctgctcatcgaagccgccacccgctccggccacctcgccgtgtcaatctccctcttccatcgcctccgctccctccatgtgtctcccaacgccgagacataccgcatcctgacccagtcactctgccgcaggggccaggtccacactgcggccaccctgctcgacgaaatgctccacaggggcatccctgctgacccactggcatacaccaccgtgctgaatgcgctctgccgtaagaagcagcttcgagaggcttaccgcttgctgtgcctcatgcgaggccgtggggtctcacctgacattgtacattacaacacggtcatcgtcggagtgtgtcgtgagggacggccactggatgcctgcaaggtgttcggagatatgagggagagtgggtgcgcgccaaatgcggtgacatatactgcggtggtgaatgggttgtgtgtgaatggattatatgacaaggcagaggcataccttgatgatatgttgggcaaagggttactaccacatttctctgtgttacattcagtgattaagggatgctgtgcagttgggaaggttaatgaggctgcagggatgatgactcgaatgcttgatcttgggatggttccacatgctgagacctggagttcagtgatcaggagtgtttgtagtgatgaggataatgtcgaggtggttttgttgcaagtgatgaaaggaataaagcaccgctcaaacataaattcaaggagtacctggacatgatatcatgtggcatggatgcaaggaacacctattttctggtgtgttgtaacaatcagttttgaaagaaaacagtagatgatgtgcaaaatgtggaccgcaaccatttttctcatcgtatgcagctaatttgatatttgagtttatttgtttatatgcaggttaggagatattgtttgacttcaactaaggtacactatcctgtttcaagaaaaaaaaaagctattgcccttaattaagcatgtagcgctattgatattgagttctagcactgttttggtagtacattttgtatgtagattctgaatttctgatgcttgttagttaaaaccatactctgttctagtagtaattttcaaatacatttactctgaatcgagtagatcatttactttttcttatgcctcttcaattgtgctttcctgtagctgcaacggcagcacccagattctgcattcgcagatcttataatctgccaaagcccaaagctttgatgccaggattcgtggttttgtagaaatgtgcagtaaaaaccgaagtcgtggttttttcggctgccgaatcaaagcgtaagctgtggattggttgtagtgcgggatggtactttctggttctgctgattcagaaaagtgaaacatatggtttgccttaaaatagacgctagtaaatggaaagaacaactgcctttcagtcccaacttcttgaggagacctgcacctttacttatgtggtatgtgtcagatcatgaaggttttaattggaagggatgagatcgaggtgtgttttatcaagttatgctgtggaaatgggtattagaatctggtgttaacattcatatacaagtaacatcgtgcgaaattatactgtaatctgtattatgtagtgcaagaatcgcaagtaatcacactggcagttggctttaacattagcctttttatcctttgcaggttactcagacacgatgctggaactgctactttttgctttggaagatcttaagatggttttgaagtctcaggagtctgatcttctcataggcttgggaaatgctgaagatgttgttctcaagcttgtaaatgaggtcactatgcaaggtttatgttgagaattgagcttaagagtttatgcaaaccttcactgctagccatctaacatatccagatctcctgattgcatgcattgatggagcataacaggtacaagcgggcctcattttcacagaagaggaagttgagtacagagtgcgcaatgttctggccagtgttgaatcatctctctctaatgcatcatacctatcgggaaaccctcctgagatagtggtttggagtgcctcattgtatgactacaaggtaattttttatctcaggttatcattccctattgctatcctctagcaacctaattatgtttggcatgctaaaatcattccaccagaatccgagggaattgtcaacatcacacaaccaatttttgaaggaaaaattaccgatgaacacacctcttgctgccccgtctttacctgctctgaacatagagatagagacaggtgtatttcagttctctttttttttttggttagtgattatatccttgatcatttttggtgtgtgcattgtgatacttgtgggctactagctaatatgttcaggtattttacttttcttttttccttcttgtagtatagcgaaggcaaccgaatatattttttttttcaaaaatgtatttcacttttctttgaatcaaatcaatccatctcttttccttgtgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0532800, RefSeq:Os09g0532800