Os09g0542000

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Revision as of 07:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0542000| Description = Alba, DNA/RNA-binding protein family protein| Version = NM_001070353.1 GI:115480448 GeneID:4347736| Length = 3106 bp...")
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Gene Name

Os09g0542000

Description

Alba, DNA/RNA-binding protein family protein

Version

NM_001070353.1 GI:115480448 GeneID:4347736

Length

3106 bp

Definition

Oryza sativa Japonica Group Os09g0542000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22175180..22178285

Sequence Coding Region

22175514..22175614,22175708..22175908,22175985..22176062,22176141..22176202,22176539..22176613
,22176699..22176787,22176860..22176940,22177974..22178111,22178211..22178285

Expression

GEO Profiles:Os09g0542000

Genome Context

<gbrowseImage1> name=NC_008402:22175180..22178285 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22175180..22178285 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggtttccctcctccaccgccacccccaccgccgcagcatcgccgacgagctagcccgccgccgctcgagcgcaagttgaggagaggagggatggatcggtaccagagggtggagaagccgagggaggaggcgcccatcaaggagaacgagatccgcatcaccacgcaggggaggatgcgcaactacatcacctacgcgaccaccttgctccaggataaaggttccgatgaagttgtattcaaggcaatggggagggcaatcaacaaaactgtgatgattgcagagctgatcaagagaagaattgttggtctccaccaaaacaccaccactggatctactgatatcactgatatgtgggagccactggaggaaggcttgctcccacttgagacaacaaggcatgtatctatgataactattaccctttcaaagaaggagctggacacatcctccatcggatatcaatctccgttgcctgctgataaggttaagcctttggttgaatacgagaacgaagaagatgctccctcacctgctggccgagggagaggccgtggtggtcaaggtcgtggaaggggaagaggcagaggcacacgtggaaatggttacatggactatgctgatggtggatgggaggatgaccatgctcctcctgcatatgcgggcaacgggtacacccgtggaagagggcgtggttttaggggccgtggcaggagaggtggcggctatggagcacaacctgattatcagcaagatggaggatactatgatgaggcaccagttcacgcgccgccccgaggccgtggtcgtggtcgaggccgtgggagaggcccggtccgaggtagaggacgcggtggcaacgtcaatggcgttatgcatgctactgcagttggcgcctaa</cdnaseq>

Protein Sequence

<aaseq>GFPPPPPPPPPQHRRRASPPPLERKLRRGGMDRYQRVEKPREEA PIKENEIRITTQGRMRNYITYATTLLQDKGSDEVVFKAMGRAINKTVMIAELIKRRIV GLHQNTTTGSTDITDMWEPLEEGLLPLETTRHVSMITITLSKKELDTSSIGYQSPLPA DKVKPLVEYENEEDAPSPAGRGRGRGGQGRGRGRGRGTRGNGYMDYADGGWEDDHAPP AYAGNGYTRGRGRGFRGRGRRGGGYGAQPDYQQDGGYYDEAPVHAPPRGRGRGRGRGR GPVRGRGRGGNVNGVMHATAVGA</aaseq>

Gene Sequence

<dnaseqindica>2672..2772#2378..2578#2224..2301#2084..2145#1673..1747#1499..1587#1346..1426#175..312#1..75#ggtttccctcctccaccgccacccccaccgccgcagcatcgccgacgagctagcccgccgccgctcgagcgcaaggtaaccgctccccctctcactgtttcacccccaccccacgcgccgctcttcgcgtcctctccggatctgagttgggtgggtcggcattgtggtgtgcagttgaggagaggagggatggatcggtaccagagggtggagaagccgagggaggaggcgcccatcaaggagaacgagatccgcatcaccacgcaggggaggatgcgcaactacatcacctacgcgaccaccttgctccaggtacacctacgcttgcagtttgaatttttcgttttagcgccagaatgtttttttgggttggtttggtagggcttgtggattggtcggtgataactgtttcggggggttttgtggttgtgattgaaaagaaagctgaatgattgggccgtacgaaatgttgtagtactatgcgctaaaagcttttgtgttttttaatgcaaattgagtgagatgagcagattatcttttctactttattatgctttgttaggctaggcaggatttcctttgtgttccattatggcttctataactattgctactaggtaattgctgcatggtttacagtatgctgaatagtcacgtgatgtaacatcatcgggcagtcgccgccaatttctgtactatataggcgacggcattgtgcttgctaaaactcaaaattaatctcagctgagtttctattttggataaaatgaaaagacgtggctagaaaagttgtagtctttttggtgtgagtgatcagtgatgtgccatgccattgtgtgtgtacatcaaccaacgatggaggtgttaagttgccatgctttatgtagatatttctactccaatcatgttccctttttttttttctgcaatggcgctgtccgctgtagtacatggagcactgatgtcttcatgtaatatgaaattgattgtgactgtagtactgtcgcatccatgtttctctaatttgtaatttctcctcctatgtttctttttgggccccaagccctcaactaccttgcaacatgtttctttctcataggaagtagcttcgcgtgcaaaaccctgctttgagaagcactttgagatgttggatatattaattgcttgacctattacatgggctttggacctattcgtcctgtctgatattgctgaagcgctttcaacatacaagatattatataacatttttttgcatggtcaaatatagcatgccatattttgttttatattgaatgtcatggttctgtagctaatcctttgcatatttaattgttcacaaaaggataaaggttccgatgaagttgtattcaaggcaatggggagggcaatcaacaaaactgtgatgattgcagagctgatcaaggtacctatggttgctccttgtaaacactacttttgacattttttaagtgttggattctcctttgttctccagagaagaattgttggtctccaccaaaacaccaccactggatctactgatatcactgatatgtgggagccactggaggaaggcttgctcccgtaagaagtgaccactttccaatttcaagtagtgctgtatagatatttatttggtcttttatttatcccttttcctcctctgcagacttgagacaacaaggcatgtatctatgataactattaccctttcaaagaaggagctggacacatcctccatcgggtatgtattctgtttttgtttaactgtatatgagtcttgaggatttttttttctaatatgtttctatcatttatatgctttagtggattgtccggagagtatgtagacccttttcaattggtgctgtgaaatgataatgctgtagtctgttcaattagacattttacataacatcaatttgtgtatggttaatatgtggtaatgtgatctgtttttaggcaccactgtaattgttacatctgtatctatacaatgtgatcagcttgccgtatgaacttctaagatagcaaagtagcaataaatatgttaattatttattaattattgtatatacagatatcaatctccgttgcctgctgataaggttaagcctttggttgaatacgagaacgaagaaggtactatgatgaattcacttgtaatatctttaacatcttatatattctttttggcttaatatttaatggtgattgtagatgctccctcacctgctggccgagggagaggccgtggtggtcaaggtcgtggaaggggaagaggcagaggcacacgtggtgaggctaaatgctgttaagtaaatcttattcagagtataaaaatgtgcagcttttccttacatactgatttcaggaaatggttacatggactatgctgatggtggatgggaggatgaccatgctcctcctgcatatgcgggcaacgggtacacccgtggaagagggcgtggttttaggggccgtggcaggagaggtggcggctatggagcacaacctgattatcagcaagatggaggatactatgatgaggcaccagttcacgcgccgccccgaggtggttacatgatatgttaatctgcccatctatcaatgaccttgtacataacgtgatacgttaatctgctgcatctcctatattatgaagcaggccgtggtcgtggtcgaggccgtgggagaggcccggtccgaggtagaggacgcggtggcaacgtcaatggcgttatgcatgctactgcagttggcgcctaagctggctgctgctattccaaagctgttgtttgttggatgcctgctccaagtatgaagatgtatcatctgtgttgtttatgggttaacaccatactctgtataagcttgacattctgttagaatgctgccggattttgatttttaactaggtttgtaggatagtctctataatgtttgtttttcttccagtagtagttgcaaactaattgtagtgttcagttggtaaaggtttagagcagtgcattctttcaatttttatataaaccgaaatcctgttgccatcttataatgtgccagcttcaaatagtgaacgcgcaaatgcagttggattttc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0542000, RefSeq:Os09g0542000