Os09g0542700

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Revision as of 07:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0542700| Description = Similar to UL36 very large tegument protein| Version = NM_001070358.2 GI:297609890 GeneID:4347742| Length = 2607 bp|...")
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Gene Name

Os09g0542700

Description

Similar to UL36 very large tegument protein

Version

NM_001070358.2 GI:297609890 GeneID:4347742

Length

2607 bp

Definition

Oryza sativa Japonica Group Os09g0542700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22207455..22210061

Sequence Coding Region

22207455..22207781,22209759..22210061

Expression

GEO Profiles:Os09g0542700

Genome Context

<gbrowseImage1> name=NC_008402:22207455..22210061 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22207455..22210061 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgccgccgcggcggaggaggcggtggtggtggtgaggggggcgccgccgccgccgtcgtcggggaagaggaggtccaccacgctgctgcacctcttccagctcgagaagcccgacgtcgtcgttggtgcgatgctgctcccgccgccgtcgccggagcccgaggaggatcgtctgatcaccaagatcgagtcgtgcagccgggtcttcacgttcgtcgatggtggcggcgccgcagggggggagtccggcgaggagagggacgcgaagacggaggcgctcggtgaggtgctcgccgcggtggcggagagggcgctgtacgtgtggaacaacgagcggttcgtggcgatggcgtgcgcggcggggccggcggcgatggaggagcggatcctgccggcgttcgtggcgagcatggaggctaacctggagcggcactggagcaggtgcgtgcagcaggtgacggccagcgtgcgtgcgctgcttgaccgggtggcgccgggggcctacgcccgctgcgccgccggcctcgccgcgcgcctggccgaggccgacgccgacgccgccgcgcgccgcgcacggtggcgccgcctggagctcgccgccgacgccggcgccgatgccaagtag</cdnaseq>

Protein Sequence

<aaseq>MGAAAAEEAVVVVRGAPPPPSSGKRRSTTLLHLFQLEKPDVVVG AMLLPPPSPEPEEDRLITKIESCSRVFTFVDGGGAAGGESGEERDAKTEALGEVLAAV AERALYVWNNERFVAMACAAGPAAMEERILPAFVASMEANLERHWSRCVQQVTASVRA LLDRVAPGAYARCAAGLAARLAEADADAAARRARWRRLELAADAGADAK</aaseq>

Gene Sequence

<dnaseqindica>2281..2607#1..303#atgggcgccgccgcggcggaggaggcggtggtggtggtgaggggggcgccgccgccgccgtcgtcggggaagaggaggtccaccacgctgctgcacctcttccagctcgagaagcccgacgtcgtcgttggtgcgatgctgctcccgccgccgtcgccggagcccgaggaggatcgtctgatcaccaagatcgagtcgtgcagccgggtcttcacgttcgtcgatggtggcggcgccgcagggggggagtccggcgaggagagggacgcgaagacggaggcgctcggtgaggtgctcgccgcggtgagggcgagcgggaagaggaagcaggggctggaccaccgggtgatggtggcgctggtcaagatggtcgccgccaacctgttccgggcgatgccgccgtccgcctacccgtcgtcgctcccgccgccgtccgacgtgctcgacgacgaggtccccgtgatggtgctgctcccgtcgtggccgcacctccacctcgtctacgacgtcctcaccgccgccgtcgccgcggcggacgccagggcgctccgcaaccacgtcgaccggagcttcctcgccggcctagtcaccctcttcgcctccgaggacccgcgtgagcgcgaccgcctcaagaccgcctaccacctgctctactccaagctcaccggcgagcgcgcgttcatgcggcgcaccatggccgccgcgctgctccggttcgtctacgacgcgtccccggcggaggccgagcgccactgcggcgtcggcgagctgctcgaggtctgcggcagcatcatcaacggcttcgccgtgccgctcaaggaggagcaccgggcgttcatggcgcgcgtgctgctgccgctgcaccggacgcggtgggtgcacacgtaccaccgccagctcgcctactgcgtgctccagttcgtccacaaggaccccggcctcgccggcgccgccgtcagggacatcctccgccactggccggcgaccaactgccagaaggaggtgctgctcatcgacgagctcgaggagatcgtcgagatcctcgaccagcaccacttcgacaagctcgtcgtccccgtctgctcccggatcgcccgctgcgtcagcagctgcagctcacaggtttgtgttcttgctccattttcaccatcgattttaactacattttcacatttcaattattactgcttgcttccaacatgcataattacctcttgcttccaacattttcttgtacattttacatgttaggatcaatcagcacaattttgtggaattcagtttcagaaatctaaactttgagcagttgaaattgaaaattaatctgaaaaatgggtttcagaatatacgctgttaagcaaaatttcagtgaacttttgagcagattcatctcagtgatccattctgccccccatgctgttagtgtggtacatgtggggaaaaaagttcggtgtgattgaaagtttcgataaaaagcggctttataaagcgtcgtcactttaatctgtccactccacgtacagcgttcgtgtaattcagtttcaaaaataaactccatttttacgcaatccaatccatcttcaaaatcccaacccattcaatttctgaatatccattatattctgagtactgaacactgatgatgctctgctctgcatctgaatatactagtagctgtagcaaactgatctaaagcttctgcatctgaatatacctgtaacaaactgatgatccaaagttttcggtaataaagagggatatgattccgattgcacttttcttgtcgtgtaatccagcctttgttgatatcatcagtactagtaatagtagcattagttgttgccatagtggttgctgtgtgtagtttacttcaaacttctaacttttatgtcgcattaaatgtttggatatatacatagagcattaaatgtggatgaaaaaaaaccaattgcacagtttatatgcaaattgcgagacgaatcttttgagactaattacgccatgatttggcattgtggtgctacagtaaatatttactaatgatggattaattaggcttaatagattcgtctcatagtttacaggcggaatttataatttattttgttattagtctacgtttaattctacaaatgtgtgtccgtatgtgtaaaaaaaaaatttcgccaaaacaactaaacacggcctaactcacactcactttagcaggttggaaaaataatcaaatcttggaccagcagttgcggtgttaatttcggtgtgctgcgtgtgattttgcaggtggcggagagggcgctgtacgtgtggaacaacgagcggttcgtggcgatggcgtgcgcggcggggccggcggcgatggaggagcggatcctgccggcgttcgtggcgagcatggaggctaacctggagcggcactggagcaggtgcgtgcagcaggtgacggccagcgtgcgtgcgctgcttgaccgggtggcgccgggggcctacgcccgctgcgccgccggcctcgccgcgcgcctggccgaggccgacgccgacgccgccgcgcgccgcgcacggtggcgccgcctggagctcgccgccgacgccggcgccgatgccaagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0542700, RefSeq:Os09g0542700