Os09g0544900

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Revision as of 07:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0544900| Description = Glucose/ribitol dehydrogenase family protein| Version = NM_001070368.1 GI:115480478 GeneID:4347752| Length = 4921 bp...")
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Gene Name

Os09g0544900

Description

Glucose/ribitol dehydrogenase family protein

Version

NM_001070368.1 GI:115480478 GeneID:4347752

Length

4921 bp

Definition

Oryza sativa Japonica Group Os09g0544900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22369643..22374563

Sequence Coding Region

22369862..22369949,22370030..22370203,22370794..22370861,22371163..22371316,22371404..22371476
,22372068..22372107,22372853..22372925,22373110..22373186,22374068..22374173
,22374291..22374313,22374404..22374475

Expression

GEO Profiles:Os09g0544900

Genome Context

<gbrowseImage1> name=NC_008402:22369643..22374563 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22369643..22374563 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgcgatccggaccacccgccgcggccgtcgaccccgaggccgtgctctcccacagcttccccgaggtctccttcgcctacgacgagagggatgtggcgctgtacgcgctcggagtcggggcgtgcggcgcggacgccatcgacgagaaggagctgcacctggtgtaccacagggacggccagccacacatcaaggctcttcctacttttgcttctttatttcctttcaagaacagcaatgggcttggaattgttgatgtgcctggccttaactttgacgcaagccttctattgcatggtcaacattacatagagatatacaagccaattcattcgcgtgccaatgttgtaaacaagaccaagatagctggcttgcatgacaaagggaaagcaactattcttgagattgagactacaacccatgtcaaagattctggtgaagttttatgtatgaacaggagtactatctacctgcgtggtgctggaggcttttctgatccttcacgaccatactcctatgctagttatcccactaaccaggtttctcgcatttctattccaaattcagcgccttctgcagtatatgaagaccagacacaacaatcccaggcactattgtacaggttatctggggactataatcctttgcattcagaccctatggttgcgcaggttgcagggttcactcgtccaatactgcatggtctcagttcccttggattcgcgatccgcgctgtcatcaaatctttctgcaatggagatccaacagcagtgaaaagcatctttggccgttttcttctgcatgtctatcctggagaaactttagtcactgaaatgtggctccaaggccagagggtgctttatcaaacaaaggtcaaggaacgcaaccgcgccgtgctttctggatatgtgttgctcaaacacatcccctcatcattgtaa</cdnaseq>

Protein Sequence

<aaseq>MAARSGPPAAAVDPEAVLSHSFPEVSFAYDERDVALYALGVGAC GADAIDEKELHLVYHRDGQPHIKALPTFASLFPFKNSNGLGIVDVPGLNFDASLLLHG QHYIEIYKPIHSRANVVNKTKIAGLHDKGKATILEIETTTHVKDSGEVLCMNRSTIYL RGAGGFSDPSRPYSYASYPTNQVSRISIPNSAPSAVYEDQTQQSQALLYRLSGDYNPL HSDPMVAQVAGFTRPILHGLSSLGFAIRAVIKSFCNGDPTAVKSIFGRFLLHVYPGET LVTEMWLQGQRVLYQTKVKERNRAVLSGYVLLKHIPSSL</aaseq>

Gene Sequence

<dnaseqindica>4615..4702#4361..4534#3703..3770#3248..3401#3088..3160#2457..2496#1639..1711#1378..1454#391..496#251..273#89..160#gtctctcttccccttccacgccacctctccccttcccacagtcccacgtcgtcgccggcgacacgcagacgaacgcgcccggcaaaccatggcggcgcgatccggaccacccgccgcggccgtcgaccccgaggccgtgctctcccacagcttccccgaggtaggtgctagctaggtcgcccccgcatcgcctccctctcccttgcttcgcgttctgttctgatgcctcctcctctgttcgcgcgcgcaggtctccttcgcctacgacgagaggtgagcagctggccggaattcgcccctcgatggaaaggcccccggcccgctcgctcgtccggttgatctgatcggctccccgtgtgtgtgtgtgtgtgtgtgtgttttgcttcgcagggatgtggcgctgtacgcgctcggagtcggggcgtgcggcgcggacgccatcgacgagaaggagctgcacctggtgtaccacagggacggccagccacacatcaaggtgcccccatcggttaaacacatctcgttttggtgcgaattcgttcttgttctgacgctctagtcgttgcgattacgctgctggatttgatttgggggaaatattgtgttggcattttgcgattgcgctgctgaatttgatttggggggaatttcgtgcgtgcgatataatagtgttgtactgagctactagcattctagatagcgatatggaatcgtgtgtattgtagggattgtagaatcttagttagtaagccggcaatgcttttattatcttgaccaagatgcacatttgcggacaaaattaaattggaacgtaccaagacatattctgctttgccaaagctctgatggattatctgctgttacaatcagtgtcttgtcttagttactttttgtcaggacttggggagctaatgcttgattacagtccttagctgaattccatccaccttagagtaatactatatgcttgacagcttgttcactatggaggattatgttgaccatcgatgtcatcaaggtgtgactgttgggaataacactacgagtttatggtgaataaacagtcctctattctggttcagcgaccagcaattcataattaatattgtagttttgttggatgagatggtgagaatgaaactaaagtaattgctcaggaattatgtttagccatgccgagagtccatgctgttctcatccagtgaatataacgagtcagacatgcatagtcgtgggacttaccaacgcattgcactgctatcagattcacatgccatcaataaactctgctccatttgtttgaaacaccgagtcttaatctagaaaatggtgtgaccgtgtgagactaacacattccttatttctattaaatcacaggctcttcctacttttgcttctttatttcctttcaagaacagcaatgggcttggaattgttgatgtgcctggccttaagtaagattttcatcagccatcacataattacagtagcttatgagttctactttccctccgtgccatgtttcgctaccattagttttgtcacttcttatccatttatctatgtttttagtagctccaatatgtatgctccaatttgtctctttagctttttttttcttttattatttttcttcagctttgacgcaagccttctattgcatggtcaacattacatagagatatacaagccaattcattcgcgtgccaatgtaagtagctttcctgtctcaaaacattttgttttaatattgttgtgcttagagcctgagatacatatagacaatgactgactggaatgatacttatcatagttttggtctagaagttggccaaaggatatttcatatttagtgactttatttccaaataattgtcaatgtggatgtacatatatggattatcttcctttggaattgaatttgtatactcatgttaggctgtgttcttccccatgctttcccaattcacctctcttgttttccgcgcgcacgcttaccaaactactaaacggtgtgtttttttgcaaaagttttctatagaaaaattgcttcaaaaatcatattaatccttttttaaaaaagaagataattaatcatgtgttaatgagtcactccgttttacatgcgcgggaaattagctcccaaccccatctaacaaacacagccttagttatgatcaactttatcatcaagacaggatagctcacaaggagatcattctctaatgttttgtcaaaagaagtaaagaacacccatcattttgcttgtttcttttattattattattattatttcttgccttgatgaaagaactattgcccagtagatagtaatctaactacttactacacagctgaaaattcctttagcttatcgatatcaggatggaaaaacattcttgagactccctcatcctttgtggcaacttatggattccttatttttatttctccaggttgtaaacaagaccaagatagctggcttgcatgacaaaggtactaaatttaaccagctctgcttgttgccttattgttctgaaattaatttttatcatctctctaatccatgccactgctagatctgaaacaaaagctgaagcatttcataaaaagaaagaaagaagcaccataaactgaaatacttcccatggagctcctcaagtatataacctattttcctgatgacttgctctattgagcctttagctctgcttcttacactctctcttaaaaaaaagctctgtgcttcttgcaatataagatttgcaacttcaaattccatctattataggaatcatatgctatggtgaatcttttttttcccgtttcatcctatgcaagtatcaagtttattattcatagtgtccctcatctaccagtgttcatccacaccagctggagtgtttggtcagaccatcagaataccgcagaacaatataaatcacttttgattgactgccatttgcatcctttgaactcttcgaccacttcatcaataaaatcctatacccactgattcgaagcaagcaaaacgatcttgtgctcaaaattgggaaatggtttcactgagactacttccatatgcagggaaagcaactattcttgagattgagactacaacccatgtcaaagattctggtgaagttttatgtatgaacaggtctgtgagatggccttacgatttcaaacatcccaatttatttatttataaaatatagagaagcaatgcaattgatgcttaatgcaggagtactatctacctgcgtggtgctggaggcttttctgatccttcacgaccatactcctatgctagttatcccactaaccaggtttctcgcatttctattccaaattcagcgccttctgcagtatatgaagaccagacacaacaatcccaggcatgttgctcattcggcatgctattttatgtgtgtgcaattacatgtctttgttggtaatagtggtacacagcatctcaattagactatagtaaccattttcttatatggtctgtgttttgatgaatttctgtgttcattgtgcataaatcatccaaagtaccataatttgcatctgctctttgagtgttttgagttcaaaatttcttttggcaagaccagttctattttgaaaaagataaatttctcgatatgtaacttggattcttcaaagtctgatcacttatcattgttcatccaggcactattgtacaggttatctggggactataatcctttgcattcagaccctatggttgcgcaggttgcagggtatgtatgccactaccgtttttgcagtgtttctgatgtgctttattttaccaggatgaacgcatttatattcgtacactgacgtttaggaaatgattgcactggatcttgcatcagaaaaagtttccagtgttcagttgttagcaacatatgtgatagaaatcgaaagagcacccaactatttgttgcctcttgttcttattaaacaagtctatataggactaaagaacttgacagtgttccttaaaacactaatatattccctaaaaaggcaaacaatgtttcactgtagcagtgaaaggtaataaaagtagcagtaagaaactcaagtccatcgagcatggttatcccttatcagatctatttggatctttcccacacaaatcgatgaattcgcgaggtcaaaataatttgtcacagatcgttttattcgtattgggatgactaggcttcagtcctcccagtaattttcatcattcttcatgttcacatgatttataaagcccttgactaccaattgcgggatcctcatttacccggagttggctttccatgcataagattctactatctgacaaggacttctgtaggttcactcgtccaatactgcatggtctcagttcccttggattcgcgatccgcgctgtcatcaaatctttctgcaatggagatccaacagcagtgaaaagcatctttggccgttttcttctgcatgtctatcctggagaaactttagtcactgaaatgtggctccaaggccagaggtaaacatattttatctgaattattcctgtagctgctgaattttcgcaacacaaacccatggaatgattggctcttgtagggtgctttatcaaacaaaggtcaaggaacgcaaccgcgccgtgctttctggatatgtgttgctcaaacacatcccctcatcattgtaagtgctgtatcatattcttgactggatattttataaattggtgcctgcctgcttgtattagtttggtagtgtgtagtggtcagaaaagctaaagctttccggggacataaaatcaggtaaatgaagagcttcagctaccgcaagtggtgggttgccattgtaatgataacaagtgctctgcacctatcttcaaatgatacattgcctaatttctcttctg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0544900, RefSeq:Os09g0544900