Os09g0548700

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Revision as of 07:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0548700| Description = FAD dependent oxidoreductase family protein| Version = NM_001070391.2 GI:297609910 GeneID:4347776| Length = 2898 bp|...")
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Gene Name

Os09g0548700

Description

FAD dependent oxidoreductase family protein

Version

NM_001070391.2 GI:297609910 GeneID:4347776

Length

2898 bp

Definition

Oryza sativa Japonica Group Os09g0548700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22530256..22533153

Sequence Coding Region

22530256..22530610,22530747..22531111,22531545..22531720,22531837..22532074,22532797..22533153

Expression

GEO Profiles:Os09g0548700

Genome Context

<gbrowseImage1> name=NC_008402:22530256..22533153 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22530256..22533153 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaagatcaagaagagggtggccatcgtcggcgccggcgtgagcggcctcgccgcgtgcaagcacgcgctggagcgcggcttccggcccgtcgtcttcgaggccgacggggccggcgccgtcggcggcgtgtgggcgcgcaccatcgcctccacgcggctccagacgccgcgcccctacttcgagtactccgacttcccgtggccgccgggcgtcaccgacctgtacccggaccacgaccaggtgacggcctacctgcgctcgtacgcggagcgcttcggcgtgctggagtgcgtccgcttcggctgccgcgtcgccggcatggagtacgccgccgccggcggggaggaggagctgcacgtcgcggatttcgtggtgctgtgcatcggacggttcagcggcttccccaacatgccgagatttccaccggacaaagggccagaggcgttcgccggcacggcgatccactccatggactactccaacatgggcgccgcgaaggcggctcagctcgtcaagggcaagcgcgtcgccgtcgtcggctaccagaaatccgccgtcgacatcgccgccgagtgcgcagacgccaatggggcgtcgcatccgtgcacgatagtgctacgcacgaagcgatggatcgtgccggacttgtacgcttggggcgtcccggttccggtgttctacatcaaccgtttgtcccagatcttgcttcacaagcctggggatggcttgatccttagctttctagccatcctcttatcaccactgagatggctcttcgccaagtttgttgagagctactacaaatgggctctgcccatggagaagcacggcatggtgccggacgaggatttcatggaggccatgtgctcatgctctgtgatgaagctaccggacaagttctacgacaaggtggaggaaggaagcatcgttctgaagaaatcgaagagattcagcttctgcaaggaaggcctggtcgtggaaggcgactcgtcttcagagaccataaagagcgacgtggtgatcttcgctacagggttcaatggcgaccagaagatcagggagatgttcaaatcgccattgttcagagaaatcgtggccggcccaccttccagcatagttccacacttcaggcaatgcatccatcctaggatcccacagctggcgatcatcggctacgctgaaagctggtcgaacctctgcgtgtccgagctactgtccaagtggctggcacatttcctccatggaagcttcagattgccaagcgtaaaggagatggaggaggacatagatgaatgggacaagtacatgaaacggtattcccccggccgtttccgtcgatcttgcattgggccggtgagcgtgctgtgcagtgatcggctgtgccaagacatgggggttcaacgacggaggaagaagtggttgctggcagattggttggtaccctacggaccagccgattacgctgatatcaacttgaacagctga</cdnaseq>

Protein Sequence

<aaseq>MEKIKKRVAIVGAGVSGLAACKHALERGFRPVVFEADGAGAVGG VWARTIASTRLQTPRPYFEYSDFPWPPGVTDLYPDHDQVTAYLRSYAERFGVLECVRF GCRVAGMEYAAAGGEEELHVADFVVLCIGRFSGFPNMPRFPPDKGPEAFAGTAIHSMD YSNMGAAKAAQLVKGKRVAVVGYQKSAVDIAAECADANGASHPCTIVLRTKRWIVPDL YAWGVPVPVFYINRLSQILLHKPGDGLILSFLAILLSPLRWLFAKFVESYYKWALPME KHGMVPDEDFMEAMCSCSVMKLPDKFYDKVEEGSIVLKKSKRFSFCKEGLVVEGDSSS ETIKSDVVIFATGFNGDQKIREMFKSPLFREIVAGPPSSIVPHFRQCIHPRIPQLAII GYAESWSNLCVSELLSKWLAHFLHGSFRLPSVKEMEEDIDEWDKYMKRYSPGRFRRSC IGPVSVLCSDRLCQDMGVQRRRKKWLLADWLVPYGPADYADINLNS</aaseq>

Gene Sequence

<dnaseqindica>2544..2898#2043..2407#1434..1609#1080..1317#1..357#atggagaagatcaagaagagggtggccatcgtcggcgccggcgtgagcggcctcgccgcgtgcaagcacgcgctggagcgcggcttccggcccgtcgtcttcgaggccgacggggccggcgccgtcggcggcgtgtgggcgcgcaccatcgcctccacgcggctccagacgccgcgcccctacttcgagtactccgacttcccgtggccgccgggcgtcaccgacctgtacccggaccacgaccaggtgacggcctacctgcgctcgtacgcggagcgcttcggcgtgctggagtgcgtccgcttcggctgccgcgtcgccggcatggagtacgccgccgccggcggggaggaggaggtcatggcctgggagcactgggccggcaatggcgaggcgttcggcaccggccgcggcgagtggcggctcactgtgcagagcggccacaacattgaggcaagcacaaataactactcctactcggtttcatattatgtactcaagtcactttatttttttagtcaatttttaaaatttgactaaatctatagaaaaatttagtaacatctaaaataccaaattagtttcattaaatatactttaatgatatatgtttgttttgtgttaacagtttactatatttttcaataaattttatcaaacttaaataagtttgaccaagaaaaaaaatcaaaatgacctactctctcgggttgataatacttatcgttttgaacaatggcacggtctctaaaaaaacaactttgactattattttttattataatatgtataaaagtgtaacaaatatagtactttttaagactaatttatatatgtagtcactatatttgaaagacaaatattttaaaaatgatttataattaaatattctaaagtttgacctcatcattgtctaaaacgacaagtattatcagccggagggagtataatataaaattgaagggagtagctgcaagtgattaatatatttttagtatgaaacatcgtgttaataatagtgccggttaatgttgcattaatccatccataataagctaaagattatcattgtgcttcagctgcacgtcgcggatttcgtggtgctgtgcatcggacggttcagcggcttccccaacatgccgagatttccaccggacaaagggccagaggcgttcgccggcacggcgatccactccatggactactccaacatgggcgccgcgaaggcggctcagctcgtcaagggcaagcgcgtcgccgtcgtcggctaccagaaatccgccgtcgacatcgccgccgagtgcgcagacgccaatggtgctaagctctcgatcgacgatccatcaagctagccggccagctttcgcaatttctgcttccatgatcgagagcgaaaatgaccttgtgttttacgcgtgtgtttgtatatgcaggggcgtcgcatccgtgcacgatagtgctacgcacgaagcgatggatcgtgccggacttgtacgcttggggcgtcccggttccggtgttctacatcaaccgtttgtcccagatcttgcttcacaagcctggggatggcttgatccttagctttctagccatcctcttatcaccactggtatttacttcctccatttcatcttgtaatttctttttcatgctatgtcaatataaaacttcgtaatgtccagtgcagatcgttttaataaaaatattataagacattttgacttttctttcctaacgcaatttattttaagtttgaccaagtttataaaacaaaattgcaaaaaatatataacaccaaattagtttcaattttgtgttgaaaatgctacggttttgttacagtttttttatataaatttgaacttttaaaaaattgattttagagaaaagtcaaaatgtccgtgtaatatgaaatggagggagtaatgattaagcataccatggcacacattaatccttttgttctactgctagttatatcatgctgtcagattaggacatctctcgtcatatttgtttttttgttgtgtcctgttattcagagatggctcttcgccaagtttgttgagagctactacaaatgggctctgcccatggagaagcacggcatggtgccggacgaggatttcatggaggccatgtgctcatgctctgtgatgaagctaccggacaagttctacgacaaggtggaggaaggaagcatcgttctgaagaaatcgaagagattcagcttctgcaaggaaggcctggtcgtggaaggcgactcgtcttcagagaccataaagagcgacgtggtgatcttcgctacagggttcaatggcgaccagaagatcagggagatgttcaaatcgccattgttcagagaaatcgtggccggcccaccttccagcatagttccacacttcaggtctataaatctttcattacattcttcttctgaatgcatacgcaggtctataaatatgtcattacattcttcttctgaatgcatatatatgcaatgtgattatggtaactgatgatttgtggttgtgttttgtcaggcaatgcatccatcctaggatcccacagctggcgatcatcggctacgctgaaagctggtcgaacctctgcgtgtccgagctactgtccaagtggctggcacatttcctccatggaagcttcagattgccaagcgtaaaggagatggaggaggacatagatgaatgggacaagtacatgaaacggtattcccccggccgtttccgtcgatcttgcattgggccggtgagcgtgctgtgcagtgatcggctgtgccaagacatgggggttcaacgacggaggaagaagtggttgctggcagattggttggtaccctacggaccagccgattacgctgatatcaacttgaacagctga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0548700, RefSeq:Os09g0548700