Os09g0549400

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Revision as of 07:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0549400| Description = Conserved hypothetical protein| Version = NM_001070393.1 GI:115480528 GeneID:4347778| Length = 3160 bp| Definition ...")
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Gene Name

Os09g0549400

Description

Conserved hypothetical protein

Version

NM_001070393.1 GI:115480528 GeneID:4347778

Length

3160 bp

Definition

Oryza sativa Japonica Group Os09g0549400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22559454..22562613

Sequence Coding Region

22560774..22561848,22561929..22562012,22562171..22562289

Expression

GEO Profiles:Os09g0549400

Genome Context

<gbrowseImage1> name=NC_008402:22559454..22562613 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22559454..22562613 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctgctggtgacaacccacactcgatctcagagaaaaaggcagcactgagagaatcgcctaaagaacctaagaatgtcggtaatcagcagcccaggacttctccttttcctaaggataaagctgctgggacagttggcatcaagcggccgcaacctaatggtcccttgaacccaactaacccagggacaaatggccatcttgtatatgtgcgcaggaggcttgaaactgatcatagcaaagttagctcttatgctagtgcagatagtatcagttctctaagctcaaagaaaactgttgtagacagacctcaggaacaaggtttgaagcatcagaacagttcgcttcaaactccgttagctcctgctgcagctgctgccacctcccctgcttctccatctggaggttcgctgcctcaaaattctctcagaaagcaatctctaggaaaggtggttgttcagccaagtattatagtgactgctaatcctccacctcgcaatgtggtgtctactacttcagttcctcagaattctatagcagctaagttggcatgttctagtgttgccgctgctagtcctccacctcgcaatctggtgtctaccactccagttcctcgtaattctataacagctaatttggcatcttctagtgtcgcggctgctagtcctccacctcgcaatctggtgtctactactccagttcctcataattctatagcagctaatttggcatcttccagtgttgcggctgctagtcctccacctcgcaatctagtgtctactactccagttcctcgaaatcctatagcagccaatgtggcatcttctagtgttgcggctgctagtccacctcgcaatctggcgtctactactaaagtttctcagaattctatagcagctaatttggcatcttctagtgtttcggctactagtacagcatctcgtggtgctgctccagcatgttatccggttgatccacaaagatcaagcaatcaagattggaaagagaggtttattaggctgcaggctttcttgagaaataacgagcaatcaggacaggaagaatatatccacatgcttcggtctttgtcatctgttggccgaagcaagcttgccattgagctggagaacagagcagtcaagctcttgattgaagaagggaaagagctgcagaagatgaaagttctgaatgtactgaacaagctttcacctactgatgctctaccattaccaactcagcctgcttctgttaggcatctggcatttccaccccgctga</cdnaseq>

Protein Sequence

<aaseq>MPAGDNPHSISEKKAALRESPKEPKNVGNQQPRTSPFPKDKAAG TVGIKRPQPNGPLNPTNPGTNGHLVYVRRRLETDHSKVSSYASADSISSLSSKKTVVD RPQEQGLKHQNSSLQTPLAPAAAAATSPASPSGGSLPQNSLRKQSLGKVVVQPSIIVT ANPPPRNVVSTTSVPQNSIAAKLACSSVAAASPPPRNLVSTTPVPRNSITANLASSSV AAASPPPRNLVSTTPVPHNSIAANLASSSVAAASPPPRNLVSTTPVPRNPIAANVASS SVAAASPPRNLASTTKVSQNSIAANLASSSVSATSTASRGAAPACYPVDPQRSSNQDW KERFIRLQAFLRNNEQSGQEEYIHMLRSLSSVGRSKLAIELENRAVKLLIEEGKELQK MKVLNVLNKLSPTDALPLPTQPASVRHLAFPPR</aaseq>

Gene Sequence

<dnaseqindica>1321..2395#2476..2559#2718..2836#agtagcttcgcccacaactcagctctcccgagctctcagggcgtgaatgataaaccctagcctccgatccgaggctccgagctcgcttcccctctctctgcgaccaggaggtgaggtaaccacctgaatctcatctctacttcttcttttctcagagcttgcagttgctttgggggtggattggaaaatttgctgaatgtgcctagcgcctggttcttgttcttgaaatgccatggattggtgagagtgttttgaggttcttgatctttgagtgagagggagtggatgtgcttcgtcttcttcttttctttataggtggatttggggtgctgcatctggccttatgccacgggacctttgatttagggttctaggttatatttcaatggtctaatccgatcccccacggttgtgtggctagtgggtctgtggttcttggtcaactattccttaattatgatttggaaaatgctatcacctggagtagattatgcgctcttagaggtgttgataaaattttcttttcccctttttgctatgtatctttgatgttagtgagttttgtatgtgctactgcagaaattaacctgaccacagagtgttgtaggggataacttatgctattcgtgacctttttgcagtaatgtgaatcataaccacatttttttgaatgaaaatataatgtctgaaaactgaaagtatataacaagttggattcatggccttgtgttgaaattgctgatagccctggtcagtgctaaggttgtgactagtcaggctgtcaggggctcagggccattgcttttatggattttaaatttttgtctaccataagttatggaaggcatgcaactttgcactacaattttggtacaagtgtaattcttttcttttgctgttacttttttactacttgagtcgccgcttggtatgttgttgtagtctcatcagttcactttaactggcttgcaaggtttatttggttgatagattgaaattcctacctcaagtagatgaaacaagcatttgcttcctgttgatgttttattatttttagctctgtagtactctatattttggtgagttttctagaaaggaaaatgttagcatactgcaatggcctgggattgtgtaataccacatcagattataactcgaaactaaagccagatatggaattacataacttgaatgctacaaatgatttggcaagtcgttactaatgtattggctggtttctaatattcaacatgttactattttgcaaatttatcactgatgattggaaatttcaatccaggctgcttagtgcggggcatcatgcctgctggtgacaacccacactcgatctcagagaaaaaggcagcactgagagaatcgcctaaagaacctaagaatgtcggtaatcagcagcccaggacttctccttttcctaaggataaagctgctgggacagttggcatcaagcggccgcaacctaatggtcccttgaacccaactaacccagggacaaatggccatcttgtatatgtgcgcaggaggcttgaaactgatcatagcaaagttagctcttatgctagtgcagatagtatcagttctctaagctcaaagaaaactgttgtagacagacctcaggaacaaggtttgaagcatcagaacagttcgcttcaaactccgttagctcctgctgcagctgctgccacctcccctgcttctccatctggaggttcgctgcctcaaaattctctcagaaagcaatctctaggaaaggtggttgttcagccaagtattatagtgactgctaatcctccacctcgcaatgtggtgtctactacttcagttcctcagaattctatagcagctaagttggcatgttctagtgttgccgctgctagtcctccacctcgcaatctggtgtctaccactccagttcctcgtaattctataacagctaatttggcatcttctagtgtcgcggctgctagtcctccacctcgcaatctggtgtctactactccagttcctcataattctatagcagctaatttggcatcttccagtgttgcggctgctagtcctccacctcgcaatctagtgtctactactccagttcctcgaaatcctatagcagccaatgtggcatcttctagtgttgcggctgctagtccacctcgcaatctggcgtctactactaaagtttctcagaattctatagcagctaatttggcatcttctagtgtttcggctactagtacagcatctcgtggtgctgctccagcatgttatccggttgatccacaaagatcaagcaatcaagattggaaagagaggtttattaggctgcaggctttcttgagaaataacgagcaatcaggacaggaagaatatatccacagtaagtttatgtttatcttagttcaatacaatttgccacaatttctatctaatacgctgtttcctttcactaaactgcagtgcttcggtctttgtcatctgttggccgaagcaagcttgccattgagctggagaacagagcagtcaagctcttgattgaagaaggtattcttcactctgattgttgaagcttcgaacatgtttgtcagtattagtgtattacttcagtttccatgctattttttcagctatcagtcatcctgaatttgtttatggaagcaggatcatttggattgactattatttttgtatcctcttgtcagggaaagagctgcagaagatgaaagttctgaatgtactgaacaagctttcacctactgatgctctaccattaccaactcagcctgcttctgttaggcatctggcatttccaccccgctgacgagaagctgaaagttcagccatgtcacggcataataggtgttgaagaagttcattctgaaatcttcccagctgacaacctgaatgctatagcatggttagcatgtgttgcctttgtgacaataagccatttatatctgccaactgatgctctctcagtgtatcagagcatatcggcagtgcgtagtgtgcattccattccgtagccaaagaaatgctctggatagacggatggttcatcacttcatctacttcaactaacctgcaaatttcatagccccctgtgctgatatttcttctgcgtgcaaaatgattgccatgtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0549400, RefSeq:Os09g0549400