Os09g0551300

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Revision as of 07:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0551300| Description = Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p domain containing protein| Version = NM_001070402.1 GI:115480546 ...")
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Gene Name

Os09g0551300

Description

Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p domain containing protein

Version

NM_001070402.1 GI:115480546 GeneID:4347787

Length

5285 bp

Definition

Oryza sativa Japonica Group Os09g0551300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22659820..22665104

Sequence Coding Region

22659907..22660285,22660466..22660629,22660708..22660771,22661036..22661169,22661337..22661420
,22661561..22661635,22661718..22661789,22661887..22661960,22662220..22662272
,22662390..22662499,22662829..22662897,22662979..22663053,22663554..22663646
,22663725..22663804,22663912..22664011,22664185..22664621,22664711..22664747

Expression

GEO Profiles:Os09g0551300

Genome Context

<gbrowseImage1> name=NC_008402:22659820..22665104 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22659820..22665104 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaagaagggcgcgccacgcaggcagcagccggcgccggcggcgcggcaactggccgtggcgaagaaggggaaggcccccccgaaggcggcgaagagggcgccgaagaagaagcaggagctgctcgagccgtcctccgacgactccgagctggagcagcagcaggagcggctccaggaggtggaggaggatgagtcagggtcggacctcgacgccccctcggactccggcgccgaggagctctccgactccgacgatgcctccttggagggaggagacagcggcgacgaggaggacgatgacgaggaggaggaggaagatgacgacgaccccctcgctgacgacttcctcgctggaagtagtgacgacgaaagtgccgaaggagatgactccggagtggattcagatgagtctgacgaccttgaggctaagtcacgagcaattgatgaagcgaaggggaaggcagaagaagaagctgaggaggaactcaaactcaatattagatcagaatctgatgagttccgattgcctacaaaggaggagttggaggaagaggcacttagaccaccaaacctgccacatcttaaaaggaggatatcagaaattgtccgggtactctcaaactttagtaagctaaggcaaaaagatgtgccgcgaaaggattatgtcgatcaactcaagactgatgtaatgtcatactatggatacaatgattttcttgttgaagcatttattgagatgttcccagctgttgagcttgttgagctactggaatcttttgagaaaagaccacctgagtgcttgcggacgaatacattgaagacccggagaagggatcttgctgctgctcttataccaagaggatttaatctggatccgatagggaagtggtcaaaggttggtctggttgtatatgactccaccatttcagctggtgccactgttgaatatatggctgggcattatatgaaacaaggtgcaagttctttcttgcctgtgatggctcttgctcctcaggagaaggagcgaattgttgatatggcggctgccccaggtggcaagactacatatattggagctcttatgaagaatactggaataatttatgcaaatgagttcaatgagaaaaggttgcatggacttttgggcaacatacatcgcatgggtgttaccaataccatagtttgtaattatgatggtaaagagctacccaaagttcttgggatgaattcggttgacagagttcttttggatgcgccctgcacaggcacagggaccatttggaaggacccacaaattaaaacatcgaagggcattgaggacatcagagactgcgcttttgtacaaaagcaactcctgttagcagctattgatttggttgatgccaactccaaaactggcggttacattgtttactcaacctgttcgttgatgattccggagaatgaggcagttattgactatgcccttaaaaagcgaaacgtaaagcttgtgccttgtggattagattttggacgtccaggattcatccggttccgagagcatcgattccatacttctttagataaaacaaggaggttttatcctcatgtgaacaacatggatggattttttgttgcaaagctgaaaaagttgagcaatacaatcccagtgacatccgagtcatctaaagtgcctgaagaagcaattgagaagactgatcctagcagcgacgatcttcaagaacagcccattcagtcaaaaatacacaaagatgtgaagaagatgaatgaagagacaaccatccttgatggggtgactgaggacaaacaacagacacatgataggcctgaaaagacgctcaaaaaccataagaagggtgagaagaaacggaatggccctggcagtggtaaaaaagaaacacacaacgaaaaagaagagcctacaagtgaaaaaaagcagcctgtgtctgctaaaattaaaaaaactgttcccaagagaacatcaggaaccaaagaaaagaagccagatactgaccaaggagggaagaggaaaaggaactggatggttaggcgagaatgggaagcttataagaagtcgaggagtaaaaaggtatga</cdnaseq>

Protein Sequence

<aaseq>MAKKGAPRRQQPAPAARQLAVAKKGKAPPKAAKRAPKKKQELLE PSSDDSELEQQQERLQEVEEDESGSDLDAPSDSGAEELSDSDDASLEGGDSGDEEDDD EEEEEDDDDPLADDFLAGSSDDESAEGDDSGVDSDESDDLEAKSRAIDEAKGKAEEEA EEELKLNIRSESDEFRLPTKEELEEEALRPPNLPHLKRRISEIVRVLSNFSKLRQKDV PRKDYVDQLKTDVMSYYGYNDFLVEAFIEMFPAVELVELLESFEKRPPECLRTNTLKT RRRDLAAALIPRGFNLDPIGKWSKVGLVVYDSTISAGATVEYMAGHYMKQGASSFLPV MALAPQEKERIVDMAAAPGGKTTYIGALMKNTGIIYANEFNEKRLHGLLGNIHRMGVT NTIVCNYDGKELPKVLGMNSVDRVLLDAPCTGTGTIWKDPQIKTSKGIEDIRDCAFVQ KQLLLAAIDLVDANSKTGGYIVYSTCSLMIPENEAVIDYALKKRNVKLVPCGLDFGRP GFIRFREHRFHTSLDKTRRFYPHVNNMDGFFVAKLKKLSNTIPVTSESSKVPEEAIEK TDPSSDDLQEQPIQSKIHKDVKKMNEETTILDGVTEDKQQTHDRPEKTLKNHKKGEKK RNGPGSGKKETHNEKEEPTSEKKQPVSAKIKKTVPKRTSGTKEKKPDTDQGGKRKRNW MVRREWEAYKKSRSKKV</aaseq>

Gene Sequence

<dnaseqindica>88..466#647..810#889..952#1217..1350#1518..1601#1742..1816#1899..1970#2068..2141#2401..2453#2571..2680#3010..3078#3160..3234#3735..3827#3906..3985#4093..4192#4366..4802#4892..4928#gcggctagggttttagggttttttttttcccttctcctccccattcgccggcaagcctccgctcccacgcggcgacggtctcctcccatggcgaagaagggcgcgccacgcaggcagcagccggcgccggcggcgcggcaactggccgtggcgaagaaggggaaggcccccccgaaggcggcgaagagggcgccgaagaagaagcaggagctgctcgagccgtcctccgacgactccgagctggagcagcagcaggagcggctccaggaggtggaggaggatgagtcagggtcggacctcgacgccccctcggactccggcgccgaggagctctccgactccgacgatgcctccttggagggaggagacagcggcgacgaggaggacgatgacgaggaggaggaggaagatgacgacgaccccctcgctgacgacttcctcgctggaagtagtgacgacgaaagtggtaacgcacggattactaatgaattgatttagcttgaatgaatagtgtagtgtgtttttcccattaagtcaattttattgtagaattcacgcgagattgtatagtaatcgagaatgtggaagcgatgctggattgtacatctcggtaatatctattgatccactatattgggttttgtagccgaaggagatgactccggagtggattcagatgagtctgacgaccttgaggctaagtcacgagcaattgatgaagcgaaggggaaggcagaagaagaagctgaggaggaactcaaactcaatattagatcagaatctgatgagttccgattgcctacaaaggaggttgattcttctgccttctgttctgatccttaccgtgttcagttttattcgcctctgaagctttagtataatctgcaggagttggaggaagaggcacttagaccaccaaacctgccacatcttaaaaggaggatatcagaaagtgcgttcatcaatatattttctattacctaagttcatgatttttttagataaaacagaggagcctcatttgggatttgacacaatattagcaagctaacgagatctagctgtttgctggtgtaaactctgagggcaaattcaaacttattattatggccatctgcattgtgatagaagcggtgcatacacaccgtaggaacgattttctgttaagcactgcactttctaacttttccttctatccattggtcttaccctctagttgtccgggtactctcaaactttagtaagctaaggcaaaaagatgtgccgcgaaaggattatgtcgatcaactcaagactgatgtaatgtcatactatggatacaatgattttcttgttgaagcatttattgaggtgagcttgatctgcttatttccttctgttaaactgtgtttttctccaccgtatcatcagagatcatcagattgtaattagaaattgttgtctgacatgcttatggaaactgtggtcatcgtttacctgccatcctaattaacattataaatgtttttactgtgcagatgttcccagctgttgagcttgttgagctactggaatcttttgagaaaagaccacctgagtgcttgcggacgaatacattgaaggtaactaactatatttcagatcaatctcctgatatgtatgtatgtggtgacatggaatgcatggtttgcatctcgcttcattcttttctttgcttgcttaagattatctttcttacctgttttgtttgtgatgttggcagacccggagaagggatcttgctgctgctcttataccaagaggatttaatctggatccgatagggaagtggtcaaaggtatgctttgtttcaatctttctcctttactcaagcaaagtccagaatctcaaagcaactctccttgtattgaaaatggcaggttggtctggttgtatatgactccaccatttcagctggtgccactgttgaatatatggctgggcattatatggtaccttcttatcccctatctttcctatcttggtatgcagattatttcatttttttttctccttccattaacattggcatttaaaatgtgactacagaaacaaggtgcaagttctttcttgcctgtgatggctcttgctcctcaggagaaggagcgaattgttgatatggcgtaagatgttttcctttctctcatatacttatggcaattgttcatttatttcatgacttcaaagttaacatgtgaacctttttttgtgatgtacacgtgattcgaatatcccatgcatgtaacctcgtcatgctaccctgacataacacttctctgcttcgaaatttgatgttaatatttgattgaattatttattttgaacttgtgaaattcatgtcctcatctctcatcagaaactgagtgtttatcttggttccagggctgccccaggtggcaagactacatatattggagctcttatgaagaatactggtcagtgtgctttgcctgtttttagtacattttgctcctataggagtaagtttgttttgtgcactctcctggcaattgaattgcaaacatactgttttcttcatctgtcatgcacaggaataatttatgcaaatgagttcaatgagaaaaggttgcatggacttttgggcaacatacatcgcatgggtgttaccaataccatagtttgtaattatgatggtaaagaggtgagtaaaccgtataaatattgttaacatggtgctaatagttgtgtttcatggactatctaatggcaaaaacataatcaactaactacatgcattaagaaagaatattgatttgtggtgtttttcaagtataatctaacaatttgtacaatatgatgacagaaatgaatatatgttcataagtaccgtttctataatcttttgctaacttttggtccattttaatcttgcagaaaataaatgtcaagtcctgatttttttttgcttgaattgggtgtagaatattctcattggaaatctatattgtgataacatacttttcatttcagctacccaaagttcttgggatgaattcggttgacagagttcttttggatgcgccctgcacaggcacaggggtaagcatcatctacttcatttaagctcctggtcccaatatattctcttttatttaacagatgtttactttttctatatagaccatttggaaggacccacaaattaaaacatcgaagggcattgaggacatcagagactgcgcttttgtacaaaaggtgcattcttgtatagggcttctttaaatcgaacctgcctgcagttttacacaattcttaatgcaacccttctgttcataaggaaaagaactgcattccacgtgcgttatttcaatttgattcttaaccaagtaacttgctcaaaacattacccgtccaccctcatgttcttgagttggtttcaagagtcatttcaaagcaatttatattgtgcggttcagttgtgctcttacatggaaataacatatgaaccccagagctgctatgttctatttgctcaatatttatgggttttgtttgcttatcctttatttgttaggctatgtgattgtgttcaattattatttggtgccatattttttgtttgttaggctatgtaataatttagtgcattctgctcaatctttctgggttgtctgcctaacctttatgctctatatttgtttgtatgcatatcatataccactatttaacaatctaactgatgaattgttctacagcaactcctgttagcagctattgatttggttgatgccaactccaaaactggcggttacattgtttactcaacctgttcgttgatgattccggaggtaagttcattggccttgtgagttgccatagctcaatgatactcaacttagttccttgaacctctcttcatcttgcagaatgaggcagttattgactatgcccttaaaaagcgaaacgtaaagcttgtgccttgtggattagattttggacgtccagggtattgtaaatctgtctcccctcatgaagaatgtgttgcattttgtgtctcccctcatgaagaatgtgttgcattttgtcttatattgttttatgtttatcctacagattcatccggttccgagagcatcgattccatacttctttagataaaacaaggaggttttatcctcatgtgaacaacatggatggattttttgttgcaaaggtaacaccaatgctatccttcagggtgaaatataaatatattatttgcaaatagtttgatcctgtgcttattccatttattaggatgtgttgagtgtactctatgatgaacagtttaattttctttgcttgatatagacataacatctgattatggcacttgctttcacacagctgaaaaagttgagcaatacaatcccagtgacatccgagtcatctaaagtgcctgaagaagcaattgagaagactgatcctagcagcgacgatcttcaagaacagcccattcagtcaaaaatacacaaagatgtgaagaagatgaatgaagagacaaccatccttgatggggtgactgaggacaaacaacagacacatgataggcctgaaaagacgctcaaaaaccataagaagggtgagaagaaacggaatggccctggcagtggtaaaaaagaaacacacaacgaaaaagaagagcctacaagtgaaaaaaagcagcctgtgtctgctaaaattaaaaaaactgttcccaagagaacatcaggaaccaaagaaaagaagccagatactgaccaaggagggaagaggaaaaggaactggatggttaggcgagaatggtgagagtacaatgctcttttttcttttatgcctgtatttgattgttttctttgctttatcctaatatggtgtaattatcttacaacagggaagcttataagaagtcgaggagtaaaaaggtatgaaaagcacgggtgaaggaactctagctgtagacaaattattgcagtgaaatttgataaccccatgagggaagatgtttaaaaggagtaacaaaactctagccgtagacaaactgcagtgaaatttgataacctacatgcggggaagatgttcaagaagagacaaaacacagttttgccgttggttatgttcgtggtgaaggaaaaaaatttgttgtactagaagtgatcgtgtgtaattttaccccttttccgtcttggtttaatgtatcaataacttattttgtcatgacactaacgcaaactctcagagatgagtgttatgaacatacgaggggagagagagatgtgatttacttc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0551300, RefSeq:Os09g0551300