Os09g0553600

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Revision as of 07:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0553600| Description = Similar to NADC homolog| Version = NM_001070416.1 GI:115480574 GeneID:4347802| Length = 3889 bp| Definition = Oryza...")
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Gene Name

Os09g0553600

Description

Similar to NADC homolog

Version

NM_001070416.1 GI:115480574 GeneID:4347802

Length

3889 bp

Definition

Oryza sativa Japonica Group Os09g0553600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22762665..22766553

Sequence Coding Region

22762701..22762956,22763780..22763913,22764014..22764077,22764185..22764267,22764662..22764745
,22764846..22764998,22765185..22765361,22765631..22765698,22765931..22766027

Expression

GEO Profiles:Os09g0553600

Genome Context

<gbrowseImage1> name=NC_008402:22762665..22766553 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22762665..22766553 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccgccgccgccgccgccgccgcgccgcccaatcccaacgttctgcagctagccccacgcctccgaggcctcgtctccttcccctcctcatactcctcctcatcgccgttctccaaccgcctccgcctccgcctcccccgcgccgcctccatgtccgccgaggcgcgggtgcccgtggcgccgccggcccaccccacctacgacctcaaggccgtcatcaacctcgccctatccgaggacgccggcgaccgaggggatgtatcttgcttggcaaccataccttctgacgtgaaagctgaagccacctttattgcaaaggaggatggtgttgtcgctggaataagcctagcagatatgatatttaagcaagttgatccatcattgaaggttgaatggtttgaaagtgatggaaattatgtccataagggattgcaatttgggagagtatatggttgtgctcgcaacattattgttgctgaaagagttgtgctcaatttcatgcaaagaatgagtggaattgctacaatgacaaaggccatggccgacgctgctcatccagcatgcatactggaaacaaggaaaacagctccaggtttacgcctcgttgacaagtgggcagtactaattggtggtggaaagaatcacagaattggcttatttgatatggttatgataaaggataatcatatttctgttgctgggggcataacaaatgcaatgaaatttgttgatcgattcttggcgaaggaaaagcttgcacttcctgttgaggttgagacaagaacacttcaggaagtaaaagatttattggagtatgctgctgagaacaatacctctttaactcgtataatgttggataatatggttgtccctcttggtaacggtgatattgatgtatcaatgctcaaggatgccgtggagttgataaatggtagatttgagactgaggcatctggaaatgtgactattgacacagtgaagaaaattggagaaacgggggttacctatatttcaagtggagcattaacacattctgtaaaggcacttgatatatctcttaagatagacactgaactcgctctccaagttggaaggcgcacaaatcgcgcctga</cdnaseq>

Protein Sequence

<aaseq>MPAAAAAAAPPNPNVLQLAPRLRGLVSFPSSYSSSSPFSNRLRL RLPRAASMSAEARVPVAPPAHPTYDLKAVINLALSEDAGDRGDVSCLATIPSDVKAEA TFIAKEDGVVAGISLADMIFKQVDPSLKVEWFESDGNYVHKGLQFGRVYGCARNIIVA ERVVLNFMQRMSGIATMTKAMADAAHPACILETRKTAPGLRLVDKWAVLIGGGKNHRI GLFDMVMIKDNHISVAGGITNAMKFVDRFLAKEKLALPVEVETRTLQEVKDLLEYAAE NNTSLTRIMLDNMVVPLGNGDIDVSMLKDAVELINGRFETEASGNVTIDTVKKIGETG VTYISSGALTHSVKALDISLKIDTELALQVGRRTNRA</aaseq>

Gene Sequence

<dnaseqindica>37..292#1116..1249#1350..1413#1521..1603#1998..2081#2182..2334#2521..2697#2967..3034#3267..3363#gctgatccccagacgccggcggctactgcgtttgcgatgcccgccgccgccgccgccgccgcgccgcccaatcccaacgttctgcagctagccccacgcctccgaggcctcgtctccttcccctcctcatactcctcctcatcgccgttctccaaccgcctccgcctccgcctcccccgcgccgcctccatgtccgccgaggcgcgggtgcccgtggcgccgccggcccaccccacctacgacctcaaggccgtcatcaacctcgccctatccgaggacgccggcgaccgaggtacgcaacgtagatagcagtcgtgtatgccgtgacaccacaagcaaatcctgttcctgtagtggtgtagtgtagtgtaggcacaattaagtactaacatttgttttttggtattcatttctggtctgtaagatcactttgttaaggctctctttgtttaggcttataagccaacttataagctgaaaagtctaagcctaaacaaacaagcggcttattcatttgacttttctaaagttataagccactctaacattattaaaccaaaaactaggttggagaagttttttttgacctatttgagatagatgtatgactccaccactaaatttagcacattaaatccaccagcttataaaccataaaagccaataagctgacttaaaagtctaaactaataagcctaagcttaaacaaagagggcctaagtttcgcggtggtctgtaaattgcaatcccatatatgcaatcaatttgtttggggtacatttatatctgttgttttttctcttcagttctttaacagttactagcatagtcatgaacgtagacactgcggttgtattagcaaaataagtttatcatcattggagattcctacaaatatgattaactctattggagctaaaggaacatattcaggtgggctgctctgctttagccctctgtagtctcctaaatagtactagtaacaatctagtatggtaatgctacttaagttcttctatctttgacattgaactattgctgtgctttgaacttatttgcagttctcatctttcagtatgagtctgacactcttggcatcatatttacaccttcaggggatgtatcttgcttggcaaccataccttctgacgtgaaagctgaagccacctttattgcaaaggaggatggtgttgtcgctggaataagcctagcagatatgatatttaagcaagttgatccatcattgaaggtatatcagcttcatagtttcattttgctgtttggcagggcatgattctgcacatttcatatatggcattgataataccattttgggggccattttacaggttgaatggtttgaaagtgatggaaattatgtccataagggattgcaatttgggagagtatatggtattctgcctaaaacaacttattgtatttggtagtgcctaagttcttgaattgtgttaacctggtaggtctaacacacttttcacattttcatcatttgtatttaggttgtgctcgcaacattattgttgctgaaagagttgtgctcaatttcatgcaaagaatgagtggaattgctacaatgacaaaggtgattggtgaccttagttgatagctaagatgttcgtctttttcgcagatgaagtgaaacataggcaactgtttatggactttggacatgtttcactattcaaacagccactctagttgctccttacatattttcctgataggtacatgcataccactttccagatttgatgataatcagccaaggctgattctcccgatctgatttttcagtaaaccactttgatgtcttgcttttcccagatcaagtatgattaaacctggtgggctgtgtacatatgatttggatgtaaaagctgggttttaatctatgttctaaaaattaatataattataccctgttgtgtgttatgtgagaatgaatttcatgcaacatacttttttattacattcaggccatggccgacgctgctcatccagcatgcatactggaaacaaggaaaacagctccaggtttacgcctcgttgacaagtgggcagtaagatacctgtctctctttttttttttgccactttaacacttgtggcttatttttcattccttctgttgcaactttaatcgtgcttgtacaagcataggtactaattggtggtggaaagaatcacagaattggcttatttgatatggttatgataaaggataatcatatttctgttgctgggggcataacaaatgcaatgaaatttgttgatcgattcttggcgaaggaaaagcttgcacttcctgttgaggtatcatctagtgattacatatatcacatctaaacgatgcacttatgtttgcatgtgattctgttttagctttacatttttctctccaggctctttagttagaaatgtgcttacgttcttgtttaaaaaaaaaaagctaaaatgagaatgtgcatatgttgacagtgattacattttatgaatcaggttgagacaagaacacttcaggaagtaaaagatttattggagtatgctgctgagaacaatacctctttaactcgtataatgttggataatatggttgtccctcttggtaacggtgatattgatgtatcaatgctcaaggatgccgtggagttgataaatggtagatttgagactgaggtgtggcaggtttaactttgcaaagcatacatttcctgcagtgttatttacataacatgggtgggggaagtgacaatttacttttattgatccttataatctgatgatgtcttgaactgctgttattattctatattgcttatttatactcattattaacttggggaatttagggtaaatatgatgtaacggtagactgcagggcttattgcatagtgaattcccttgtttaactgacgaattacaatgaaatgtgactgttgcttcaggcatctggaaatgtgactattgacacagtgaagaaaattggagaaacgggggttacctatatttcaaggtatcggcatcttgtttctattaactgctactaattatttccatttgtcaactgatatcatgtgcactgccttctgtttgagttgagatatgtttgcttttcagagcaattttgtaatacgactttaattgccagctctttgtttttgtttgctgttttactgtagaagaacaacctgatatcttgaacttccaaatcatttatttcaacaatttcttgattttcttttcagtggagcattaacacattctgtaaaggcacttgatatatctcttaagatagacactgaactcgctctccaagttggaaggcgcacaaatcgcgcctgactctacagaactaatgtaaccttgcaagatctgcaggtacgtttagttccccatatacaacttgacctttattttcctgcttctctaagctaactctttggagccatcagggtgtttctgtggcgtggcttgccagtctatcaatccatgcccttctcatcaacttgtaagcgttgagtgtacaacaaagaatgtgttttcccatatttatgggatataaaccaacaccacataatacagcaaaataataacattaccttgtaggcttgcctaccgtcctagcatttgtatttggtagaaaaaaaactgcagattgcggcaagttatcgaattttactcaggtattaataagactttttgcaccatgaaaaattagcaagctggacactgtaaatgggatgtgcgcggcattgaacttgcagttctgcacttgtgtttgaccaaacaaacactataaaatggtgatgtttgtgatctacaaaagaaaaggaagtctaacacagcagtgcattctttttcagattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0553600, RefSeq:Os09g0553600