Os09g0556200

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Revision as of 07:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0556200| Description = Octicosapeptide/Phox/Bem1p domain containing protein| Version = NM_001070432.2 GI:297609939 GeneID:4347818| Length =...")
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Gene Name

Os09g0556200

Description

Octicosapeptide/Phox/Bem1p domain containing protein

Version

NM_001070432.2 GI:297609939 GeneID:4347818

Length

4297 bp

Definition

Oryza sativa Japonica Group Os09g0556200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22930493..22934789

Sequence Coding Region

22930493..22932404,22934725..22934789

Expression

GEO Profiles:Os09g0556200

Genome Context

<gbrowseImage1> name=NC_008402:22930493..22934789 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22930493..22934789 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaagccgtcgctgaagaagaagagcggcggcgggaagtccggcgagcatggcggcggcggcaagccggcgctggaccggtccgggtccaaggtgctcgacggcgacgagaccatcttcacggacatggcgcaggagctcaaggaggaggggaacaagctgttccagcggcgggagcacgagcgcgcgctcctcaactacgagaaggccatcaagctcctcccccgggggcaccccgacgtcgcctacctccacagcaacctcgccgcctgctacatgcagatgagcccccccgaccactaccgcgccatcaacgagtgcaacctcgccctcgacgcctcgcccaggtacagcaaggcgctgctcaagcgggcgcgctgcttcgaggcgctcggcaggctcgacctcgcctaccgcgacgtcgccaaggtgctcgccgtcgagcccaacaacctcaccgcgatcgacgtgggtgaccgtgtcaagaaggccatggacgagaaggggatcgtgatggacgacaaggaggccatgccatcgccggaggaggtggtggccgccgcgccgaagcagaagccgcgcaagaagaaggggcggaaggcggccgccaaggcggcggcggcggctgtggaggaggaggaggaggcgaaggtggtggagcctgtcaaggaggtggaggagccaccaaggcaggtgaagcttgtgtttggtgaggacatcaggtgggcgcaggtgccggcgagctgcagcatggcacagcttcgcgaggctgtccggagcaagtttccggggctcaaggctgttcttgtcaagtacaaggacaaagagggtgacctggtgacaatcaccaatcaggatgagctcaaatgggctgaggatttggccgagccagggagctcgcttaggctctatgtcaccgaggccaatccggagcatgaaccttatcttgatgacaccaacagcgggccgttggagagaaacgtgaattccgacaatggaagtaccagaagcaataggcaggatgaggataggagcacggtgacttgcattgacgactggattgtgcagtttgctcggcttttcaagaaccatgtcggggtcagctctgatgagtatttggacctccatgaggtcagcatgaagctgtacaccgaggctatcgaggacacaattactactgaggaagcccaggaggtgtttcaacttgctgaaagcaacttccaggagatggcagcgcttgcgtttttccattggggtaatgttcatatgtctcgggccaggaagaggttgttactgccaggagactctccacaggaatcggtacttgaacaagtgaaggaagcgtatgaatgggcaaaagaagagtacaataaggctgggaggagatatgaagaagccgtgaaggcaaagccaaactttttcgaaggttttcttgcacttgcacatcaacattttgagcaagcaaaactgtcatggtattatgcaattggtagtagcgtagacctggacacatggccatcatctgaagtcctggaactcttcaataaagctgaagataacatggagaggggtacagagatgtgggaggaaatggaagagcaacgcctgaagaatcggtcaaaacctagccaggagaatgtggtgctggagaagatgggcttggatgaatatatcaaagatgtatccactgatgacgcagctgaacaagcttctaatatgaggtctcagataaacattttatggggtatgctactttatgaacgttcagttgtggagtttaaattaggccttccaatgtgggaggattgcttgatggcagctattgaaaagttcaaacttggaggggcttcagctacagacattgctgtgttggttaaaaaccactgtgccaacgaaactgcccaagatgaccaagaggccatgggtggttctaccttaagttcagagttctgtgaactgaagaagacgagatga</cdnaseq>

Protein Sequence

<aaseq>MGKPSLKKKSGGGKSGEHGGGGKPALDRSGSKVLDGDETIFTDM AQELKEEGNKLFQRREHERALLNYEKAIKLLPRGHPDVAYLHSNLAACYMQMSPPDHY RAINECNLALDASPRYSKALLKRARCFEALGRLDLAYRDVAKVLAVEPNNLTAIDVGD RVKKAMDEKGIVMDDKEAMPSPEEVVAAAPKQKPRKKKGRKAAAKAAAAAVEEEEEAK VVEPVKEVEEPPRQVKLVFGEDIRWAQVPASCSMAQLREAVRSKFPGLKAVLVKYKDK EGDLVTITNQDELKWAEDLAEPGSSLRLYVTEANPEHEPYLDDTNSGPLERNVNSDNG STRSNRQDEDRSTVTCIDDWIVQFARLFKNHVGVSSDEYLDLHEVSMKLYTEAIEDTI TTEEAQEVFQLAESNFQEMAALAFFHWGNVHMSRARKRLLLPGDSPQESVLEQVKEAY EWAKEEYNKAGRRYEEAVKAKPNFFEGFLALAHQHFEQAKLSWYYAIGSSVDLDTWPS SEVLELFNKAEDNMERGTEMWEEMEEQRLKNRSKPSQENVVLEKMGLDEYIKDVSTDD AAEQASNMRSQINILWGMLLYERSVVEFKLGLPMWEDCLMAAIEKFKLGGASATDIAV LVKNHCANETAQDDQEAMGGSTLSSEFCELKKTR</aaseq>

Gene Sequence

<dnaseqindica>1..1912#4233..4297#atggggaagccgtcgctgaagaagaagagcggcggcgggaagtccggcgagcatggcggcggcggcaagccggcgctggaccggtccgggtccaaggtgctcgacggcgacgagaccatcttcacggacatggcgcaggagctcaaggaggaggggaacaagctgttccagcggcgggagcacgagcgcgcgctcctcaactacgagaaggccatcaagctcctcccccgggggcaccccgacgtcgcctacctccacagcaacctcgccgcctgctacatgcagatgagcccccccgaccactaccgcgccatcaacgagtgcaacctcgccctcgacgcctcgcccaggtacagcaaggcgctgctcaagcgggcgcgctgcttcgaggcgctcggcaggctcgacctcgcctaccgcgacgtcgccaaggtgctcgccgtcgagcccaacaacctcaccgcgatcgacgtgggtgaccgtgtcaagaaggccatggacgagaaggggatcgtgatggacgacaaggaggccatgccatcgccggaggaggtggtggccgccgcgccgaagcagaagccgcgcaagaagaaggggcggaaggcggccgccaaggcggcggcggcggctgtggaggaggaggaggaggcgaaggtggtggagcctgtcaaggaggtggaggagccaccaaggcaggtgaagcttgtgtttggtgaggacatcaggtgggcgcaggtgccggcgagctgcagcatggcacagcttcgcgaggctgtccggagcaagtttccggggctcaaggctgttcttgtcaagtacaaggacaaagagggtgacctggtgacaatcaccaatcaggatgagctcaaatgggctgaggatttggccgagccagggagctcgcttaggctctatgtcaccgaggccaatccggagcatgaaccttatcttgatgacaccaacagcgggccgttggagagaaacgtgaattccgacaatggaagtaccagaagcaataggcaggatgaggataggagcacggtgacttgcattgacgactggattgtgcagtttgctcggcttttcaagaaccatgtcggggtcagctctgatgagtatttggacctccatgaggtcagcatgaagctgtacaccgaggctatcgaggacacaattactactgaggaagcccaggaggtgtttcaacttgctgaaagcaacttccaggagatggcagcgcttgcgtttttccattggggtaatgttcatatgtctcgggccaggaagaggttgttactgccaggagactctccacaggaatcggtacttgaacaagtgaaggaagcgtatgaatgggcaaaagaagagtacaataaggctgggaggagatatgaagaagccgtgaaggcaaagccaaactttttcgaaggttttcttgcacttgcacatcaacattttgagcaagcaaaactgtcatggtattatgcaattggtagtagcgtagacctggacacatggccatcatctgaagtcctggaactcttcaataaagctgaagataacatggagaggggtacagagatgtgggaggaaatggaagagcaacgcctgaagaatcggtcaaaacctagccaggagaatgtggtgctggagaagatgggcttggatgaatatatcaaagatgtatccactgatgacgcagctgaacaagcttctaatatgaggtctcagataaacattttatggggtatgctactttatgaacgttcagttgtggagtttaaattaggccttccaatgtgggaggattgcttgatggcagctattgaaaagttcaaacttggaggggcttcagctacagacattgctgtgttggttaaaaaccactgtgccaacgaaactgcccaagatggtaaggcaattttaacttactttatctcatcatgttctcctgggaatagtatatacagtgttgattttgctagaaaataccagaactagaaaattatagcaactctagtgtcattaatattgcggaacaatgaattgcaaatttctcatataccttatgtaccacccagaatatttttttcaacttcttatgtttcaaatatatatatcatttaattctcaaaagcatacgcaacttgtttctaagtttgcatcttttcttcataggtttgggcttcaagattgatgaaattgtgcaagcctggaatgaaatgtatgacattaaacggtggctgcgtggtgttccatccttccgtcttgagccactatttaggcggagagttccacaattgcatactgcactggagcatatatagtatacatgaagttgctccagcacatatttaatgccggagcattgttatcagtaccagttttctcttttaggtgagaatcattatagtggtaccatatatctcttcttgcacatgataccctcgtttgtgcatgacatttctctttttagccctcattttggcctttaagcattgccaaatatttgggtgtaaaggaagcatctttttatgtctttttacgtgcatcagaattaggatcttatgactacttgtaccgcggtccacattttgattccttgcactgcttggttttgatgattgtctaaactgaatgtgctgaaaatatttgttttataacctgttgagtcgcagtaacttgtttagcatccaatggagagttcataccatgttgtcaattgatttgatctttgcatggacaaaatattgctgctatatagtctaatgttatgtattctgtattttttcatggtcagtttagaagggcttggattaaaacaacttagtaatttagtatagacttaagcttccccacaaaaaggaatctctgtgaaattaatcttaaattattctaaagataagtttaggaaccatctgtattaactccttaggtttagcgaagtttaggcataactgcagttcctccggcaagtccctaaactcttgttagatgaagttctgtttgagttattctgctgctactatagaatatttattttctcatcagtcacggtattaacgtttcaatatttctgagtagctgatttgttcattcatctttgtcagatttttgtaactaatcttctttaaatccagttagtatatcgcatagttcatcaaactcttcctttattacacttgcaatactgaatttggcttctgatttcactctgcaggtcaagttctgcatgggatacagtatatggatttcttgtgcttcatttttttattatacattcgaagagtctgcttcctggttgtgaagcttttcatagaaacttattctttgcacagggctggagcacctttgcaatttggataccttagttcttgtttttgtctgctttgtcatgcacaggaagctgtgctttgttactggattaggggctacatgtttctgtggcctcgtaatccattgctggaggattggtggcatcctccttttgttttgtgggtattttgtgactacatgcctgttttgcaaactcaaattaggcttgtaatacgattacatttattgttattgaaagggaaaagaaaaaggtcagaaaaaaacatcatatctcagtcagctgacaacttgaaccatttttgcttcagtatattttgcatgctctatcaggagtatccgaaaacagatcagagctagacatcaagacagtagtacctgctgcacatgcatgacaggctagttgattgtgagagaacatgcatgtgttctctgtcctgcaagaaattttcttcagtggctgctgtaagggcaagttttataataggggtggttaccacatctaattttatccatgtaagataaaagatgatatatagaatacatcacatctacactacctctagcatactaattcaaatgtttttattttatttgtttgtccaatccactctttcttttatcttctttttcttggggtttgtgtgaaggttatcccttatataaggggtggctcaccttctctttcctcacttatttcttccaccttatcatacaatcttacgtggcatgtttaggggcaacacatctagcattatagtacttgccctaagtgaaccaattactccatgattgctccttcattattactgtacatttggaggtacaatgtgtcaggattgggcatgttacttgcaaccgagttttgcaactgctccatatatttgctgcatgatcagaccaagaggccatgggtggttctaccttaagttcagagttctgtgaactgaagaagacgagatga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0556200, RefSeq:Os09g0556200