Os09g0556800

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Revision as of 07:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0556800| Description = Conserved hypothetical protein| Version = NM_001070436.1 GI:115480614 GeneID:4347823| Length = 2178 bp| Definition ...")
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Gene Name

Os09g0556800

Description

Conserved hypothetical protein

Version

NM_001070436.1 GI:115480614 GeneID:4347823

Length

2178 bp

Definition

Oryza sativa Japonica Group Os09g0556800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22966505..22968682

Sequence Coding Region

22966657..22966936,22967023..22967094,22967187..22967266,22967401..22968144,22968247..22968582

Expression

GEO Profiles:Os09g0556800

Genome Context

<gbrowseImage1> name=NC_008402:22966505..22968682 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22966505..22968682 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtacacgtacacgccgacgtactactcgggcctgcacgacaccatcgcgtcgctgtgcaagtccatcctccccttcggcggcttcaggtccggccgccgcctcaccgccgaccaggccgcggcgaggcgccacgccgacgcgctcaagtggcagcaggaatcgttccaccgcatcctccacctctccgcgctccaccgcgagggcatcgtcccgccctccgacgtcgacgccttccgcgccgacatgctcgccaccctcgccgccgccccgcccccgcccgcccaccccgaccagcccgccatcctccgcgacaagctcctcttcctccaggagctcttgtacgccaagtgcatctcggcggcggagtacaactccaccaagagcccactcgtgcagcgcctcgcggcgttcggtgtcgtggtcgactgccccgacgcggacgtcggcgatggcggcgcggcttcggcggcggcaccagcctcgtcgtcttccatggaggagtggtcggagatcgacctccgggacccgccgcccgccgcggcggcctccgacaagccgaagcacaaggccttcgtcccgccatggaagagcagaggcaagaaggagctggacgcatcgaggccaccgttagcccccgtcgaccagaacaacagcaagaacgccccatccgtcctcatggccgagagctcgccgtcggaagccatgcccaccgccaagaccgacaaggggaagaggaggcacctgacggcgatgttccacaacggcggcaatggcagcgagaacaaggagcccccggcggcgtccatggaaggcacagatcaggagaaggatgcgtcaaagagcaagaagaagagttcgtgggggttcgatggcctcaagaagtggaagaaggcaagcaacgatgaggcgacggccggcggtgagcggccggagcacgctgcgccgcggtcttcgtacagtgagtgccggcttgaggcgagcccggctgttgccaaggatgcaaagagagccaagaagaagctgaatacggccaccggcgacgatgattctgcttccgatttagcgaatgataaggttttggtggagaacacaaagaaagagctttcaaggattcaggctgagttgtcatccaccaaccgaaacttgaacttttcggatcaacaaattgaggccatctcaacaaggcttccagtggacaaatctgacctcaagaccttcttcccaaaggcatggtgcgatgaacacggagacaacgtgatcaacgtggcgaagaaagagttcaaggagcacgtcgaagagatggagaagcagagggacatcaccggcggcggtgatggctgggttgcattcggagacagccatgacgaaaatttcaacccgagagcattctctcagcatcaggctgcagtgaagggtaacgtccatgacagtcttagcagcagtcaacatttcacaaaccctttctatgacgagaagaatcctttcttgactccaagctacgattga</cdnaseq>

Protein Sequence

<aaseq>MGYTYTPTYYSGLHDTIASLCKSILPFGGFRSGRRLTADQAAAR RHADALKWQQESFHRILHLSALHREGIVPPSDVDAFRADMLATLAAAPPPPAHPDQPA ILRDKLLFLQELLYAKCISAAEYNSTKSPLVQRLAAFGVVVDCPDADVGDGGAASAAA PASSSSMEEWSEIDLRDPPPAAAASDKPKHKAFVPPWKSRGKKELDASRPPLAPVDQN NSKNAPSVLMAESSPSEAMPTAKTDKGKRRHLTAMFHNGGNGSENKEPPAASMEGTDQ EKDASKSKKKSSWGFDGLKKWKKASNDEATAGGERPEHAAPRSSYSECRLEASPAVAK DAKRAKKKLNTATGDDDSASDLANDKVLVENTKKELSRIQAELSSTNRNLNFSDQQIE AISTRLPVDKSDLKTFFPKAWCDEHGDNVINVAKKEFKEHVEEMEKQRDITGGGDGWV AFGDSHDENFNPRAFSQHQAAVKGNVHDSLSSSQHFTNPFYDEKNPFLTPSYD</aaseq>

Gene Sequence

<dnaseqindica>1747..2026#1589..1660#1417..1496#539..1282#101..436#tctccctctctctctctctcacgctcccctcctcgcctcgcctgagcagccaccggagcagcagcagcagcagctcgccgccgacgagtcgccgacgacgatggggtacacgtacacgccgacgtactactcgggcctgcacgacaccatcgcgtcgctgtgcaagtccatcctccccttcggcggcttcaggtccggccgccgcctcaccgccgaccaggccgcggcgaggcgccacgccgacgcgctcaagtggcagcaggaatcgttccaccgcatcctccacctctccgcgctccaccgcgagggcatcgtcccgccctccgacgtcgacgccttccgcgccgacatgctcgccaccctcgccgccgccccgcccccgcccgcccaccccgaccagcccgccatcctccgcgacaagctcctcttcctccaggtactacccacccgcatcgccttcttcttcttcttcttctacctccctccctccaatccgagcgagcaattgatcgaacgcttctcccttctccttttgcaggagctcttgtacgccaagtgcatctcggcggcggagtacaactccaccaagagcccactcgtgcagcgcctcgcggcgttcggtgtcgtggtcgactgccccgacgcggacgtcggcgatggcggcgcggcttcggcggcggcaccagcctcgtcgtcttccatggaggagtggtcggagatcgacctccgggacccgccgcccgccgcggcggcctccgacaagccgaagcacaaggccttcgtcccgccatggaagagcagaggcaagaaggagctggacgcatcgaggccaccgttagcccccgtcgaccagaacaacagcaagaacgccccatccgtcctcatggccgagagctcgccgtcggaagccatgcccaccgccaagaccgacaaggggaagaggaggcacctgacggcgatgttccacaacggcggcaatggcagcgagaacaaggagcccccggcggcgtccatggaaggcacagatcaggagaaggatgcgtcaaagagcaagaagaagagttcgtgggggttcgatggcctcaagaagtggaagaaggcaagcaacgatgaggcgacggccggcggtgagcggccggagcacgctgcgccgcggtcttcgtacagtgagtgccggcttgaggcgagcccggctgttgccaaggatgcaaagagagccaagaagaagctgaatacggccaccggcgacgatgattctgcttccgatttagcgaatgataaggtattgcaaagtggttgatctctccatcgtgtttagtttcagtaaacagattgtgcaggtgtccattgattggtacttggtagtttcagaattactggactgaactgagctttttgtatctgaacttactgaaggttttggtggagaacacaaagaaagagctttcaaggattcaggctgagttgtcatccaccaaccgaaacttgaacttttcgtaagttttaatctgtctgttttgccaatgaattttttgatcaattactgttgtttgaagtgtgtaaaatgtatgtcctggcatcattgtagggatcaacaaattgaggccatctcaacaaggcttccagtggacaaatctgacctcaagaccttcttcccaaagtactgaaaacttcacaattccgtcatcattcagatttaacagacatggttcagaaattctgagatgatagtatctgtttttgcagggcatggtgcgatgaacacggagacaacgtgatcaacgtggcgaagaaagagttcaaggagcacgtcgaagagatggagaagcagagggacatcaccggcggcggtgatggctgggttgcattcggagacagccatgacgaaaatttcaacccgagagcattctctcagcatcaggctgcagtgaagggtaacgtccatgacagtcttagcagcagtcaacatttcacaaaccctttctatgacgagaagaatcctttcttgactccaagctacgattgatactgcgagtgaatgtaattggtcttttgtgttggaaatttctgtgatagttttacctccaagttactgatgttgtactttaaggttcaattgttatattggacctaggttgtgtatgaattttctatgaattatgagcttgttccatgagc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0556800, RefSeq:Os09g0556800