Os09g0565100

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Revision as of 07:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0565100| Description = Peptidase C1A, papain family protein| Version = NM_001070480.1 GI:115480702 GeneID:4347870| Length = 2616 bp| Defin...")
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Gene Name

Os09g0565100

Description

Peptidase C1A, papain family protein

Version

NM_001070480.1 GI:115480702 GeneID:4347870

Length

2616 bp

Definition

Oryza sativa Japonica Group Os09g0565100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23323345..23325960

Sequence Coding Region

23323345..23323503,23323551..23323604,23323712..23324088,23324269..23324500,23324717..23324726
,23325833..23325960

Expression

GEO Profiles:Os09g0565100

Genome Context

<gbrowseImage1> name=NC_008402:23323345..23325960 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23323345..23325960 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggaaatcattggtggtggtgctgggtgtggtggtggcagctgcagccatggcggtggcggcgtcggctcacgacgtcccgttcacggacaaggacctggagtcggaggagagcatgtggagccttgacggtcagtggggggacctcgccgaaaaggttagcaggttcgaggtgttcaagaagaacgccaggtacatccacgaattcaacaagaggaagggcatgtcctactggctcggcctcaacaagttcgccgacatgacttccgaggagttcatggccaaatacaccggcgccaaggtagacgacaccggcgtctccggcgccggcgctgcaagcgaggccgatcgaggaggagcagctgctgggagctgctgggcgttctcggcggtgggcgcggtggaggggataaacgcgatcatgacagggaacctgctgacgctgtcggaacagcaggtgctcgactgcttcggcgccggcgactgctccggcggttggcccgaccaggcgcagcagtacatcgtcaagaacgggatcaccctggatcggtgcgggaaggaaccgtactacccggcctacgatgccacgaagcatccgtgcagaacggtggcaggcaaacaacccatcatcacggtggacgatgtaaagtgggtgaacaaaagcgaggccgccctgctgctcaaagtctaccagcagcccatctctgtggcactcgacgccagcgggtggcagttctaccaagggggcgtgttcactgggccttgccaaacgccaccaccgttgaaccatgctgtgctgaattcatggggcgcaaactgggccgagagcggctacatccgcatgaaacgtgacgtgggaaccccagatggcctatgtggcatcgccacgcacgccacatatcctataaagaagtgtccctgccccccaaaaaccccaactgctatcgcatcctactag</cdnaseq>

Protein Sequence

<aaseq>MRKSLVVVLGVVVAAAAMAVAASAHDVPFTDKDLESEESMWSLD GQWGDLAEKVSRFEVFKKNARYIHEFNKRKGMSYWLGLNKFADMTSEEFMAKYTGAKV DDTGVSGAGAASEADRGGAAAGSCWAFSAVGAVEGINAIMTGNLLTLSEQQVLDCFGA GDCSGGWPDQAQQYIVKNGITLDRCGKEPYYPAYDATKHPCRTVAGKQPIITVDDVKW VNKSEAALLLKVYQQPISVALDASGWQFYQGGVFTGPCQTPPPLNHAVLNSWGANWAE SGYIRMKRDVGTPDGLCGIATHATYPIKKCPCPPKTPTAIASY</aaseq>

Gene Sequence

<dnaseqindica>2458..2616#2357..2410#1873..2249#1461..1692#1235..1244#1..128#atgaggaaatcattggtggtggtgctgggtgtggtggtggcagctgcagccatggcggtggcggcgtcggctcacgacgtcccgttcacggacaaggacctggagtcggaggagagcatgtggagcctgtacgagagatggcgcagcgtgtatgcgtcgtcgtcgtcgtcgggcactactacagatccgggcttcagtgacgggtcatctgtgacgggccaacgcaacttgtcaaaaatgagtcatctctgacgggccgaaaaaatatcctctaccagggaggacccgtcacagatgtgaagtcatctgtgacggcttgcacttgtaacccgtcacagatcgtctgtgacgggtcacaaccatggctcgtcacacatgacatgtcatctgtgacgggtgtagtattatgaaccatcacaaaagagaccactcatctctgacgggtctttaactaacacacgtcacagataacgttatctctgacgggtggtagttatgacccgtcagtgatgagtgaaaattcaaatttttaaattttgcaaaaaacctcggattgaaacatgtcctatataaaagttgtagctctcaatgatatccacaactttataactaacaacatttctattagagatcgtttacatccccgaacatgcattacaagtgatcagatctacttttaaaaacaaaattttgagttttttttcaaatgacatggatggatacatgccccgtatcaaagtcatagaactcaatcagatctacaacattataattgaaaatattttcatttcacaaaatttacatgttataaagtgagatatattttgaaaattttgaattcttcaaacaacatcggatgaagatattttctatgtaaaagttataaaacacgatgagatctataactatttagttgataatattttcatttgaagtcatttagggtgttaaatatatgttaaatgattcagacaagcatagacaaaataataacattgggttagtagtcaatatgtgttgagtaggtgagttggtaagggagctctatatggaggttgaggtcttgagttcgaatctcacttgtagcatacaagttatattgcgtgaaaaattgtgaatttgtaggtagtgatgtgtaaccatgtataggatggctagtaaaattcaaaatatttttttgaggttttttgttgcgtttaaaattcaaaaattgtatttcttgctttgtcatcagtgacggtcaggtagttacgacacgtcactaatgactcatctgtgacgggtgacaagttttaacctgtcagagatgacttatataccggtcagagatgggttatctgtgacgggtgtttcatccgtcacaggtgattttgtcatcagtgaccactaatcactgaccaagaccaaacccgtcaaaggtgagggtttgggcccgtcagagatgacctggtccggcgtagtggggggacctcgccgaaaaggttagcaggttcgaggtgttcaagaagaacgccaggtacatccacgaattcaacaagaggaagggcatgtcctactggctcggcctcaacaagttcgccgacatgacttccgaggagttcatggccaaatacaccggcgccaaggtagacgacaccggcgtctccggcgccggcgctgcaagcgaggccgatcgaggaggagcagctgctggtcggcgacgtgtcccctccggcgacgtgggattggaggcagcatggtgctgtgactgatgtcaaggaccaagacggttgcggtacgtataacatgtttaataattcacttaattacgaaaacatgctaataaattgtttgataaaattaatgaatgggattaactaattaattacaaagggagctgctgggcgttctcggcggtgggcgcggtggaggggataaacgcgatcatgacagggaacctgctgacgctgtcggaacagcaggtgctcgactgcttcggcgccggcgactgctccggcggttggcccgaccaggcgcagcagtacatcgtcaagaacgggatcaccctggatcggtgcgggaaggaaccgtactacccggcctacgatgccacgaagcatccgtgcagaacggtggcaggcaaacaacccatcatcacggtggacgatgtaaagtgggtgaacaaaagcgaggccgccctgctgctcaaagtctaccagcagcccatctctgtggcactcgacgccagcgggtggcagttctaccaaggggtcagcgattatctctctcaccaataatattcacctaattcaattcgcgagtgaaatttaattaaaatgctgaaaatgaacttatcactgtgcatgcatggatgcagggcgtgttcactgggccttgccaaacgccaccaccgttgaaccatgctgtgctggtagtggggtatggtgtgactacgagacaaaattctggatcgtcaagaattcatggggcgcaaactgggccgagagcggctacatccgcatgaaacgtgacgtgggaaccccagatggcctatgtggcatcgccacgcacgccacatatcctataaagaagtgtccctgccccccaaaaaccccaactgctatcgcatcctactag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0565100, RefSeq:Os09g0565100