Os09g0565500

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Gene Name

Os09g0565500

Description

Invasin/intimin cell-adhesion domain containing protein

Version

NM_001070483.1 GI:115480708 GeneID:4347873

Length

5960 bp

Definition

Oryza sativa Japonica Group Os09g0565500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23361169..23367128

Sequence Coding Region

23361608..23361955,23362477..23362579,23362681..23362811,23363131..23363202,23363507..23363588
,23364118..23364225,23364323..23364464,23365253..23365336,23365430..23365640
,23365722..23365776,23365871..23365962,23366046..23366106,23366396..23366754

Expression

GEO Profiles:Os09g0565500

Genome Context

<gbrowseImage1> name=NC_008402:23361169..23367128 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23361169..23367128 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgactggcagttctgggtccatagcttacagtgcatccaagacaattcttgttgtgccagatcctcctctcgcacttggacttcctataacatggttattcccacccttttatactactacggaccttttacctagatcagttgacccagactcagatgacctggagagtactattggatattctctgctaaggaacattggtaaaagtgatcttgttttgcaaaatgctaacattattgatggaagtaaaattaggactggagaaagcaatgcgattgattgcattcaggcaaaggatcactcaactggtagaacagaaattgcatcgtgcctacgagttgctgaggttgcacaagcacagatagcagctgcagaatcatcaatccatatagcctatctttctgtacatgataaagttgagttggatataaaatacagtgatgaattaggttataccttcagtgaagcacttggaatagtccctgtaaagattgagacgaatcatcctgatgtcgtgtcaattcttatgccaaaagaaggcaatggtacacatggtacccatgaacgttttgtgttacaggcaagaagtcatggaactgctcttgtaaggttgcaaatcagccatattcccaagaaagccgatttcataatggtatctgttggtgcacagatgtatcccagggatgtggtccttcgttctgggcagcaactgaacttcaccattattggagaccggatggatgtgcgtggatccagtcagtggttaagtagcaatgaaaaagttgtgcatattaatagaataaccggtgaagcacaagcacgtggtgaaggtatagcagaagtaatattcaaaggtccaaatacaaaactgcacacaactgtcaccgtgctgaaggtgaaccagatagtagttaatgctcctgcggagacgctgacaaatgctgctggaccacctggtggatacaagttctctgtaaaattaagtgattcaactggacacagcgcagactcctctatcaatcacattaacgtcccatttgactgcaaggttgaaccttcttttgttgggtttgttgagccgtggagtgatgatgctgctaaaaaatcttactgcttatttcatccatattcacctgcgcaactgttgcctgttaagttaaacctgaaggaaggatttttacacattgttgttcatgcaaatctaaaagaagatccaaaggtgacaggatctgctcacgccctctttgtcaaagggttctacattaaagaacctaggaagttaaatctgactccaagctgcaaccatagcatcatcactattggtgggaatactgatgttgagttattctggaatgctaaagatttactgtcagccagtcgtgttgatacaaatggaagaggtgttccaagtcaaattagttatcaggttgaagcacttaaaaggcaatcattctatgacaagatcactataattcttccagccaccggccagactgaagaaatagaagttatctatgacactggagaaagaagagagccatcgacatcaggcttgacaacattggctgcaatcgtgacatgcattgttgttccaatcgctacgattgcgctcttcatgaagttgctggagaagaaaccgatcagagaggcaccaccaagacacgcgactcctgcgcctgcgtcagcaccagcagccgcgatggctgacccagcgtccccagctactggtgagttgtcacctcgtacgcctcagccgttcatggagtacgtgaggaggaccatcgacgacacgccctactacaagcgcgacgccaggaggcgattcaacccccagaacacgtactga</cdnaseq>

Protein Sequence

<aaseq>MTGSSGSIAYSASKTILVVPDPPLALGLPITWLFPPFYTTTDLL PRSVDPDSDDLESTIGYSLLRNIGKSDLVLQNANIIDGSKIRTGESNAIDCIQAKDHS TGRTEIASCLRVAEVAQAQIAAAESSIHIAYLSVHDKVELDIKYSDELGYTFSEALGI VPVKIETNHPDVVSILMPKEGNGTHGTHERFVLQARSHGTALVRLQISHIPKKADFIM VSVGAQMYPRDVVLRSGQQLNFTIIGDRMDVRGSSQWLSSNEKVVHINRITGEAQARG EGIAEVIFKGPNTKLHTTVTVLKVNQIVVNAPAETLTNAAGPPGGYKFSVKLSDSTGH SADSSINHINVPFDCKVEPSFVGFVEPWSDDAAKKSYCLFHPYSPAQLLPVKLNLKEG FLHIVVHANLKEDPKVTGSAHALFVKGFYIKEPRKLNLTPSCNHSIITIGGNTDVELF WNAKDLLSASRVDTNGRGVPSQISYQVEALKRQSFYDKITIILPATGQTEEIEVIYDT GERREPSTSGLTTLAAIVTCIVVPIATIALFMKLLEKKPIREAPPRHATPAPASAPAA AMADPASPATGELSPRTPQPFMEYVRRTIDDTPYYKRDARRRFNPQNTY</aaseq>

Gene Sequence

<dnaseqindica>440..787#1309..1411#1513..1643#1963..2034#2339..2420#2950..3057#3155..3296#4085..4168#4262..4472#4554..4608#4703..4794#4878..4938#5228..5586#agtagcaatgcttttattaatcatgtgattggaaggtactacatagaagtattgaatgatatactgaattgccaatttattgcctgtttgtacattttgaaagtagcctagccccttaactttttgaaagtagtggagtgtttctgttgagcccaatattcatattaaagggagctaaactaatactccgaagtagctgtttgggagaactcattatgcattgctcaaagttacagtgattggtgaaacttttttggacctaacgaaggactatttctattcttggcttttaaataaaaatgaatattgattgagacactttaaaaaacactcttatgtggtaagttgggttagctgcaagagtcctaattaatatttttcttttgacagatctgctgggaaaaccaaaatttctgtgtcaattacttgtgatttcttgatgactggcagttctgggtccatagcttacagtgcatccaagacaattcttgttgtgccagatcctcctctcgcacttggacttcctataacatggttattcccacccttttatactactacggaccttttacctagatcagttgacccagactcagatgacctggagagtactattggatattctctgctaaggaacattggtaaaagtgatcttgttttgcaaaatgctaacattattgatggaagtaaaattaggactggagaaagcaatgcgattgattgcattcaggcaaaggatcactcaactggtagaacagaaattgcatcgtgcctacgagttgctgaggttggatgctggtactctaattacatatatttctattgcaaatagcatagcactaggcatccctattatctctgagattgtaatattatttatttttccatgtttttctggactacatttcatacacaatgtttcccttggtatgattgaagtcacttatgactaaagggtactcaaacgtatgtgactgggtagttaaagtaggcatatagttcaccaaaaaaaaaggaacagggatatagttgcatgttgagtgtatgtgtcagtttatcatttcaatgcatgcgggaatgcatactctagtaattttttctgtttaatatctaattgaggctgtttattagttttggaaaagaccaccgtggccctgaaggatgcctaaaaataagtcgcagacaagaatctctttcaaaatttttgggccatcattttatacagatgttctataatcgcattgctctctatgtttctatgtattttagaaaataatccttgattctgttgttatcattatttttcaggttgcacaagcacagatagcagctgcagaatcatcaatccatatagcctatctttctgtacatgataaagttgagttggatataaaatacagtgatgaattaggtaattcactaacaattttattagtatcaatgcttcatttattttatttttcatctagaaaactttacttcttcctgtttttatcctttccctccaaccaggttataccttcagtgaagcacttggaatagtccctgtaaagattgagacgaatcatcctgatgtcgtgtcaattcttatgccaaaagaaggcaatggtacacatggtacccatgaacgttttgtgttacaggtatgggcttgcccctctaatcgagcttcaatattgttttggaaaaaaaggtccatttttataaccctgaacttttgcaaaagtctgaaaaaaaaagagtgagtctggtgggaagttcaggctgtaaactgggtttttagtggatcttaacgctttctcaattgtaatgattgctttaaagctgtgacaagaataatcaaggaatattttggtgaaactaattctggaagttgtaacaagaatttgagtcaatcttgagtacggataatttgagtgagacttccatgcaaaatgtgttgtgttttgttgtcctttgcaggcaagaagtcatggaactgctcttgtaaggttgcaaatcagccatattcccaagaaagccgatttcataatggtaaagtgctaaagttcaatgctactatcccagagttctttgtctggtccataatggcataatgggctcgtagctatttaaacttgaatgcagtgtagcttattctggctagcgctcctcaggtggagttttttttgtgtatgtcttgtacacaatgtatcaaactaaactgtaatagcatatgctttcagaatctggcggtgacatcatctagcaaaaccatataccgaactgccatttcttcggttgaatgctcacaatggaatacagtttgtgttttgactaacacattccactatatcaggtatctgttggtgcacagatgtatcccagggatgtggtccttcgttctgggcagcaactgaacttcaccattattggagaccgtacgtccagtgaaaccatttccatactaccggttattcgcatctttttttgttgtattgggagtttcgtctgatgcaccatttcagtgtgcatgattatattttagttagttgttatccttttatattcattgctgtccacacatcacgttttagttagtagtacatgatcttatcttttggaaaaacatgggtcaagggtgatagtatagtactcccttcgttcacaaatgtaagacgccctttctggctggtcatattcagaaatgtagggcctatttcagattccaataaatgaatggtgttccctctacccctatatactactattctaacttccttacaagcatgccttagtgtatgcgcaaaagaagacgcaccctacattagaaaacaaaatggatagttcatagaaaggccacactaccagaataggtagttaactcatacatgttttgtaagagcaaaggacatgcatgctactatatattctatgctttgttttctaaccatggccttccttttgtagggatggatgtgcgtggatccagtcagtggttaagtagcaatgaaaaagttgtgcatattaatagaataaccggtgaagcacaagcacgtggtgaaggtatagcagaaggtatgcaactatgattatcttcaatgagtagaatacattacctagtgtcattccctcccgattcttatttttcagtgtgatttctccatctaaacagtaatattcaaaggtccaaatacaaaactgcacacaactgtcaccgtgctgaaggtgaaccagatagtagttaatgctcctgcggagacgctgacaaatgctgctggaccacctggtggatacaagttctctgtaaaattaaggtttgtaatgctcatatcatttcacaatattccttccatattgttgttgatcaatatagtcaaagccaaagctactctaatatgataatttattagatatgaacttctagtacactaggctattacagttttgcaatccatacatttaggcctattatactagaacttggagcaccagcagagtagtattgctaagatggtctctatgcctcatttttggtactttcagattcaggttcacagctggagattgtgacctgaaactggtggtcctagatgtgtctatatagaaatggtattatataacttgcaacagaatatacttcagcatacatcagttcttagcaacattagagaacaggatggtggagggaggcgtataattgtagcaggaactggacaaatagtcctgtacttcctccgtcccaaaatgaagccatttttgaggttggcacgggtattaagaaagtaggtgagaatgattggaggaagtgcgtgattggttgaaaagagaaagtaggtgaagaagaatggttgtgattggttgagaggaggtaggtgaagaaatagcttcattttgggacaagacactgtgctagaaatagctacattttgggacggagggagtattgaatagacaaagttactataattgtacgtagtatttgatactaagtccaatcagaacatagcgcttctgtagcttttttttttgtcttggtatttggatactcatgaatttacttatgtttgataaaaactaacctttccccccttgttgaaagaagtgattcaactggacacagcgcagactcctctatcaatcacattaacgtcccatttgactgcaaggttgaaccttcttttgttgggtatgtttcccatcatcggctggtcatacaacttgcttttcctctagattattatagggatgcattaaagtctcattctcctttctcccttaggtttgttgagccgtggagtgatgatgctgctaaaaaatcttactgcttatttcatccatattcacctgcgcaactgttgcctgttaagttaaacctgaaggaaggatttttacacattgttgttcatgcaaatctaaaagaagatccaaaggtgacaggatctgctcacgccctctttgtcaaagggttctacattaaagaacctaggaaggtagccaccttcccactccccatctcatgtgcatttctttttgttctaactgattattaaaaagctggttatctgatgcagttaaatctgactccaagctgcaaccatagcatcatcactattggtgggaatactggtaggataaaaccctattgtgtccatgaactttagacctttgggctttggctgtgtttgtttctaatgctagagttattattgccctgctccagatgttgagttattctggaatgctaaagatttactgtcagccagtcgtgttgatacaaatggaagaggtgttccaagtcaaattagttatcaggtaaattgcaactgacaaggaagtatttttagaaattgatgcttaacggtggtaaacatgtactgactcacatgcttttgcaggttgaagcacttaaaaggcaatcattctatgacaagatcactataattcttccagccaccggtatgctattctatctttgccaaaatccttgtaatgagtagattactagagtcatgacatttcttggtagttttcaaaaggaataaaagtagtcgtcttggtctgaccatcatcctgaaccacctttttggtgattggtaaaactgaggtcaaaaccaagtaaacctacatttgaatgcactgatcctccttaacagtatatacaatgtgcaatttaagtatcacctctcctatgcaaggtgattgcaattcgatcatcactaacaacattgttttcctccacctacaggccagactgaagaaatagaagttatctatgacactggagaaagaagagagccatcgacatcaggcttgacaacattggctgcaatcgtgacatgcattgttgttccaatcgctacgattgcgctcttcatgaagttgctggagaagaaaccgatcagagaggcaccaccaagacacgcgactcctgcgcctgcgtcagcaccagcagccgcgatggctgacccagcgtccccagctactggtgagttgtcacctcgtacgcctcagccgttcatggagtacgtgaggaggaccatcgacgacacgccctactacaagcgcgacgccaggaggcgattcaacccccagaacacgtactgatcaaagcgcatgcagcctgggtaatctgtggcttttgtgcctgcattttgcccaaatggtagatatggttagacggtagtacgtagctggcagagagactatagtaatgtgcttggacgtgcatgccggaagatctaccgatgagctttatgctgtcatttttctgatgtcgacagcatcatgtatctctctgtatcatcaattggtgatctgccgatcccatttcctgttaaaaaggaatcgtagggaactcgtgttgtacagttctcctaggtacattgcctgtgttaggcttgtaattggggcagaccgaacgaacaattgagtgagtgatactgatggatgccaaatgtaggaggatgtttaaacccagc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0565500, RefSeq:Os09g0565500