Os09g0569200

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Revision as of 07:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0569200| Description = Similar to Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase)| Version = NM_001070511.1 GI:115480764 GeneI...")
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Gene Name

Os09g0569200

Description

Similar to Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase)

Version

NM_001070511.1 GI:115480764 GeneID:4347903

Length

3257 bp

Definition

Oryza sativa Japonica Group Os09g0569200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23544922..23548178

Sequence Coding Region

23544940..23545167,23545254..23545334,23545411..23545614,23545800..23545994,23546099..23546263
,23546536..23546796,23546943..23547161,23547320..23547539,23547626..23547654

Expression

GEO Profiles:Os09g0569200

Genome Context

<gbrowseImage1> name=NC_008402:23544922..23548178 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23544922..23548178 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatttcttctcctgcgctcttcttcctcctccagccaggccgcccctccatcgccgcgccgccgctcccctcctcgccggcgcctcccctccgcggcatctccatctcccccgtcgccgcccgccccatctcctccctccgctcctcctcctccatcaggatcatctcgccgccgcacgccctccccgacccgctcctctccctcccgtccatggacccccaagaggtgcccgatctgctgcccccgcgcccaccggagcgcgacttcgccggaacgccatacgtccccgtctatgtcatgctcccgcttggagtggtcaatggtaatggcgaggtggtcgacgccgacgtcttggtgggccagcttcgggtactcaaggctgccggcgtcgatggggtcatggtcgattgctggtgggggaatgtcgaggcccacaggccgcaggagtacaattggaccggttacaagcgactcttccatatgatcagggagctcaagctcaagctgcaggtggtcatgtcattccatgagtgtggaggcaatgttggagatgatgtgtctattcctctcccacattgggtaacagagatcggaagaagcaatccagatatctacttcaccgacagggctggcaggcgtaacacggagtgcctttcatggggcattgataaagaaagggttcttcaaggacggacaggggtcgaggtatactttgactacatgagaagcttccgagtagaatttgatgaatattttgaggatggtatcatttcagaaattgagattgggctaggggcttgtggagagttgaggtatccatcttatccagcaaaacatgggtggaaataccctggcattggagaatttcagtgctacgacagatacttacagaaaagtttaagaagagctgcagaagcacgaggacataccatatgggcaagagcgccagacagtgcaggccattataattctgagccaaatctgactggatttttctctgacggaggagattatgatagctactatggtcgttttttcctcaattggtattcccaggtgttggtggatcatgctgaccgtgtattgatgttagccaggttggcttttgaaggttcagatattgctgttaaggtttcaggtgtacactggtggtacaaaactgccagtcatgctgctgaattgactgctgggttttataacccatgcaaccgtgatggttatgcctcaattgctgctgtcctgaaaaaacatggtgcagctttgaactttacatgtgttgaactgcgcactatggatcagcatgaggtatttcctgaggcctttgcagatccagagggccttgtatggcaggtgctaaatgctgcatgggatgctggcataccagtagctagtgagaatgctctgccttgctacgatagagatggctttaacaaaattttggagaatgcaaagccactgaatgatccagatgggaggcatttactaggattcacgtacctgaggctcaccaaagtcctcttcgagagagctaattttttggaatttgagcgtttcgttaagagaatgcatggtgaagcagttctcgatctacaggtataa</cdnaseq>

Protein Sequence

<aaseq>MISSPALFFLLQPGRPSIAAPPLPSSPAPPLRGISISPVAARPI SSLRSSSSIRIISPPHALPDPLLSLPSMDPQEVPDLLPPRPPERDFAGTPYVPVYVML PLGVVNGNGEVVDADVLVGQLRVLKAAGVDGVMVDCWWGNVEAHRPQEYNWTGYKRLF HMIRELKLKLQVVMSFHECGGNVGDDVSIPLPHWVTEIGRSNPDIYFTDRAGRRNTEC LSWGIDKERVLQGRTGVEVYFDYMRSFRVEFDEYFEDGIISEIEIGLGACGELRYPSY PAKHGWKYPGIGEFQCYDRYLQKSLRRAAEARGHTIWARAPDSAGHYNSEPNLTGFFS DGGDYDSYYGRFFLNWYSQVLVDHADRVLMLARLAFEGSDIAVKVSGVHWWYKTASHA AELTAGFYNPCNRDGYASIAAVLKKHGAALNFTCVELRTMDQHEVFPEAFADPEGLVW QVLNAAWDAGIPVASENALPCYDRDGFNKILENAKPLNDPDGRHLLGFTYLRLTKVLF ERANFLEFERFVKRMHGEAVLDLQV</aaseq>

Gene Sequence

<dnaseqindica>19..246#333..413#490..693#879..1073#1178..1342#1615..1875#2022..2240#2399..2618#2705..2733#gggctaatcataataatcatgatttcttctcctgcgctcttcttcctcctccagccaggccgcccctccatcgccgcgccgccgctcccctcctcgccggcgcctcccctccgcggcatctccatctcccccgtcgccgcccgccccatctcctccctccgctcctcctcctccatcaggatcatctcgccgccgcacgccctccccgacccgctcctctccctcccgtccatggacccccaagaggtacctcttcttcttcttcttcttcttctatcagctactactagtacgttacgtacgggcattcaacctagctggcttcactgcaggtgcccgatctgctgcccccgcgcccaccggagcgcgacttcgccggaacgccatacgtccccgtctatgtcatgctcccggtaggtacatctctccttccattctcttcctcgcaccacgccgctcgctcttatgtatgtatgttgctgtctgtagcttggagtggtcaatggtaatggcgaggtggtcgacgccgacgtcttggtgggccagcttcgggtactcaaggctgccggcgtcgatggggtcatggtcgattgctggtgggggaatgtcgaggcccacaggccgcaggagtacaattggaccggttacaagcgactcttccatatgatcagggagctcaagctcaagctgcaggttattcctccactccacattatattgtcatgcatgtcaccctttgttgttaatcatgttttggtgtttatgcgcatttcagatttcagtaccgtgctaatacaggatctattcatttatcctctccaattttaccctttctttcatggtgtttcttttaatttcttgtcaaaatacttacttaggtggtcatgtcattccatgagtgtggaggcaatgttggagatgatgtgtctattcctctcccacattgggtaacagagatcggaagaagcaatccagatatctacttcaccgacagggctggcaggcgtaacacggagtgcctttcatggggcattgataaagaaagggttcttcaaggacggacaggggtcgaggtattctacccacttctctaattacgcaatccactaattcttaatgggaagatcacaatccgttgtgtttatgtgtttatctgtttcatcccttattgatttaggtatactttgactacatgagaagcttccgagtagaatttgatgaatattttgaggatggtatcatttcagaaattgagattgggctaggggcttgtggagagttgaggtatccatcttatccagcaaaacatgggtggaaataccctggcattggagaatttcaggtaaaacttcacccttcacactctgttcttctcctgcgttcttttttgggttcaatatcctatcttaatgaaatttggtcggcctaatccttccgtcgacccagcaatttttgggttcaatatctactcattgatgaattgacaaccgtcacttaatgatctgggcaagagcaccagattcaggctatttacccttgtaaagttttctatttacccttgtaaagttttcttatacaacaagagggttcacttgagaatgtattttgctgcagtgctacgacagatacttacagaaaagtttaagaagagctgcagaagcacgaggacataccatatgggcaagagcgccagacagtgcaggccattataattctgagccaaatctgactggatttttctctgacggaggagattatgatagctactatggtcgttttttcctcaattggtattcccaggtgttggtggatcatgctgaccgtgtattgatgttagccaggttggcttttgaaggttcagatattgctgttaaggtcagttaacttcttgttgttaatgaatgaagtgcacaactgttttcagtatttgaccattcttctgggggcacgtatccctgtttccagcatcctaatcctataggtttgacatcaagcttggtttacactttgtggtatgacaggtttcaggtgtacactggtggtacaaaactgccagtcatgctgctgaattgactgctgggttttataacccatgcaaccgtgatggttatgcctcaattgctgctgtcctgaaaaaacatggtgcagctttgaactttacatgtgttgaactgcgcactatggatcagcatgaggtatttcctgaggcctttgcagatccagagggccttgtatggcaggtagggaactttccatcatcctagccatggttgctgttttgctttctcatctacctggtagcagcttagtaggctaatgtattttttttctgtttagctgagaccagctatcttgttgttatgtcaatgccttatcaattggacgtatcgattttcaggtgctaaatgctgcatgggatgctggcataccagtagctagtgagaatgctctgccttgctacgatagagatggctttaacaaaattttggagaatgcaaagccactgaatgatccagatgggaggcatttactaggattcacgtacctgaggctcaccaaagtcctcttcgagagagctaattttttggaatttgagcgtttcgttaagagaatgcatggtaaggcttagcagaccatgtttactgacagtggttccacctgacgtaaacctcagacttatgaatcttgtcatgtttgtttgcaggtgaagcagttctcgatctacaggtataagttgtgttcagggttcttacatacatacatatatatacatgccattgtaattggcataggccttatggcttatgatgggggaacagagatgccatttttgtttcgtaggttgttgtagtataccatcagcagatttttgaactatagagggtttggctccatggtgtaaagcatacccttggcaaagagttgtcatgcagaaaattgatggtttcattcggaatgaggttggaagcaggtgtatttctttcgatgcggcagacatatttgatttgtcatgagatgaggattgggtgagcaggtggtatccttctgaaagatttgaggctgtattgaagagaatgtgctgatgcatgtttatcatggagcaagcgacattaatggagttagcaaaggttctcgcggtgtatgtgtttgtatttgttggtggaatgtcactcgaggatcttggctgtatacaatacatacatgtgcttttttttgggtcttttctacagtgtatgagaaatgcatgtttcttactg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0569200, RefSeq:Os09g0569200