Os09g0570600

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Revision as of 07:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0570600| Description = PAP/25A core domain containing protein| Version = NM_001070523.1 GI:115480788 GeneID:4347915| Length = 4973 bp| Def...")
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Gene Name

Os09g0570600

Description

PAP/25A core domain containing protein

Version

NM_001070523.1 GI:115480788 GeneID:4347915

Length

4973 bp

Definition

Oryza sativa Japonica Group Os09g0570600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23610403..23615375

Sequence Coding Region

23610720..23610805,23610935..23610972,23611067..23611255,23612346..23612530,23612618..23612713
,23613093..23613138,23613226..23613332,23613798..23613899,23614005..23614088

Expression

GEO Profiles:Os09g0570600

Genome Context

<gbrowseImage1> name=NC_008402:23610403..23615375 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23610403..23615375 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacaggagaggacactactcgatccccgccaccatctccgccggcggtcttctccatgccatcatcttcctccgaaagcacacagtccagtgacagtgaggtaagcgcatgggatccccaagtgttacgcgcgcatgccgaatgtctcgagtcggaggagttggcagccctgtcagtcaatcgcactcttcttcctattctcgataatttgcttcttcaggtgtatactatgctgcgcccaaaaccacttgattacgagcaacggactaccttggttcatgtcttcaacaacatagcaaaccaaatcttcgggaatggaattttctgtggggttctgcctgttgtaactgctagggtgcctattgtgaatgttattgatcggggaactgggattgagtgtgatattacggttgaaaataaagatggcatgacaagatcaatgatctttaagttcatttcttcacttgatccaaggtttcagatactaagttacctggtgaagttctgggctaagatacatgatgtgaatagcccgagagagcgaacgctgagctccatgtcaatagtttcattagttgctttccatttgcagacccgggatcctccaatattacccccgttatctgccttattaaaagatggttcagattttgaaagtgttgagaggaatacgttggcatttaaggggtttgggagaacaaataaagaaactgtagctgaactgtttgtatcgttgatcagtaaactattatcagcggagagcttatgggagcatgggctatgcgctagcaactttgaagcatcatggatctctaagacctggaagaaaggaattggcaatttaaatgtcagttgggaaaaaggagatgcagaagatttgcagatgtcttcgagattgtgctttgaacttgttagatttcatgaggggtaa</cdnaseq>

Protein Sequence

<aaseq>MTGEDTTRSPPPSPPAVFSMPSSSSESTQSSDSEVSAWDPQVLR AHAECLESEELAALSVNRTLLPILDNLLLQVYTMLRPKPLDYEQRTTLVHVFNNIANQ IFGNGIFCGVLPVVTARVPIVNVIDRGTGIECDITVENKDGMTRSMIFKFISSLDPRF QILSYLVKFWAKIHDVNSPRERTLSSMSIVSLVAFHLQTRDPPILPPLSALLKDGSDF ESVERNTLAFKGFGRTNKETVAELFVSLISKLLSAESLWEHGLCASNFEASWISKTWK KGIGNLNVSWEKGDAEDLQMSSRLCFELVRFHEG</aaseq>

Gene Sequence

<dnaseqindica>318..403#533..570#665..853#1944..2128#2216..2311#2691..2736#2824..2930#3396..3497#3603..3686#atcctcatttcatttcccaccccacccagtccaccggcggccacgcacggacggcggcggcggcggcggccagggacagcgcaccggcgggggcggcggtggtagcaacgcccattcctcaaccacccgtcatccctcgtcgctcgtcacccagcggcctagtcgggtggtacgggatccctgctcatccgccggtcctctgcgggggcgggggcgacaagttggggagcgcggcggggcgtcggaggagttgacaggagtagttgcgcgagtagtcagtattccagcagtgagcgagactgacttgtaggacccacatgacaggagaggacactactcgatccccgccaccatctccgccggcggtcttctccatgccatcatcttcctccgaaagcacacagttagttggcgtcctctactccaatccaatcctgtattattccttcccgctcgctggggctgggaatatcatactccactggatctcatatgttttcctctttgatttgattgttggtgctccacctaggtccagtgacagtgaggtaagcgcatgggatccccaaggtacggtactaggctactagctgctgctcccattcatcttccatgcattttgcgctagctctccttttaatttcgatttcctgtttctcttcagtgttacgcgcgcatgccgaatgtctcgagtcggaggagttggcagccctgtcagtcaatcgcactcttcttcctattctcgataatttgcttcttcaggtgtatactatgctgcgcccaaaaccacttgattacgagcaacggactaccttggttcatgtcttcaacaacatagcaaaccaaatcttcggtatgctaagaggcatcatttttctttcatttccttactcatctgcttattgcatacccctgtaatcgtttctaataccaatgttcatctactatcctatactaatgttcttcacaatactctacttcactacttggccactgtttaccactagaaatctagaatatgcctccatatctgtcaatacctcccaatgactgtaaaacaactctttataaagtgatagtttgattagttgctaaacattgtctctagcatgctgattggccatcctctttaacaaatcatttcaggtaacaataatgggtttccagtcgtggaggcatttggatcatttacaatggatttatttacccctagaagtgacctggacctctctgtcaattttactgctaatactgacgatcagtatgctcgcaagaaaaaaatttctgctattaggaagttcaccaaagttctatattctcatcaaagtaattactgcctagagcacagtatctctaaatattcactagtactttgtgtgtccaccaatttttatcattaggctcctttgcatgagtcacaaagttcccaggtcgatgggatcgaggaacgtggtatgctacttgtgagaggtttttataaggtgggaatgaaaatgcacccacgtttccaggatggggacggcattccccggtgtcaaggaatgcttccttcgaccccgtttcctgtgacatgccacttggttttctgatcttacttccaattgcaacgatagctcatacagggataaaaaaaggatatcaaaactgacaacattgcagatggtttatatgtactaagcctcagttgctactaaatctcataaaagtgaaaaaagcgcactgcaaaagtaatcataggataattagttcaaatcagcttatctgaaaattggagctttacaaagtcactgggtgtgccgactgatatacttcactaatggaccatcctggccacttttttttttcttttttcaaatagagaaagcataaaaatagcccgctataattatgcatctttctaagcccatctatctccaactgcagtaatatactcacattttcagggaatggaattttctgtggggttctgcctgttgtaactgctagggtgcctattgtgaatgttattgatcggggaactgggattgagtgtgatattacggttgaaaataaagatggcatgacaagatcaatgatctttaagttcatttcttcacttgatccaaggtttcagatactaagttacctggtaatgtaatcccctcccccgagaaaaaaagatatactatacaaatgcaaggtgataacaatgttcttttttcttttgtgtttgaaggtgaagttctgggctaagatacatgatgtgaatagcccgagagagcgaacgctgagctccatgtcaatagtttcattagttgctttccatttgcaggtacagaggatttcacaatgcactgtttgactattatatgatgattagttgttttcccatattttgtttcaactattggatttgaatcaatatgtctagcaaacaaagaggattttcactaaaaagtttttcatatccttataatatcaaggaatgatgccaggggtttatgttgaatttcaattgaacagatgaagtctttttacacattcgttttggagtttgttgcatcgaactttatgaaactgggtgttttactagtaactcactagatctatgcttaagaaaacaaacatttggcatttaatacttcttttccttttttatatgaataagtataagttgaatcttcttaccattggtgcaatgtgcagcgcagacccgggatcctccaatattacccccgttatctgccttattaaaaggtttttgaaataattttttatctttgttttttttcatgtgctggcagcaactgagtcactctgagctgatgatgagattccttgcagatggttcagattttgaaagtgttgagaggaatacgttggcatttaaggggtttgggagaacaaataaagaaactgtagctgaactgtttgtatcgttgatcagtaaagtgagttcctttgggatataacttttatatagcttttatgtttaagttactttccttattaataatgtgatttgttgactcatttaaatgttcattactgtgcctaggttccttttgaactcagattctccttgtatcattttctttaagaactttgggttaggcaagcccaaacaagataatactcgtccagaaattctcataatgtacccgttctagcaggatgtatttgtttgtttgtgcttttggggcttttagctattttcattacacggaaaaatacattgcacactattaatttcaacgttttttccccaatattgcaattaacatttttgtgtgtacaattatttggtcacttgtattagcttgaacttgttttaaaattgtaccaccttaattaccattgtgtgatagtttattatggtcgctaataagtcacaaagttggccttttgttctccagctattatcagcggagagcttatgggagcatgggctatgcgctagcaactttgaagcatcatggatctctaagacctggaagaaaggaattggcaatttaaatgtaagatttgttttgaattaagtattatgccctcaacaagaattttcctttactcctgttcatgtaggttgaagatttcttggaccggtcacaaaattttgctaggtcagttgggaaaaaggagatgcagaagatttgcagatgtcttcgagattgtgctttgaacttgttagatttcatgaggggtaaactagatacatcaaagctaaagacccttctgtttggatgccttaaaccagatgagctagtcagtaaacctcgtttgaagcgtggcaagagaaaacgcaagccacaaacgagcccagatagcagatatgggctcggaaagggaaagcatgctgtgcacctagtaggatcagaccagcatgctaattctacaactgctgaagctcctcaggttgtacatcgacatcccacccaggctaaggctagtactcagtgtgcgcacaagccaacgccaccttttgttattatcccttctggttttggctacagtttatcgcttcagttgccagtggctcctcagcttagtcgaggattgctgggccgacccccaccagttaatttagttcacttgaataatggagctcagctaccacagcaaggtctgcttctttccctgccgtcccaacaagcagctggcagtaacagtggagttacttatgctggagctcagcagcttcagcgcaacgaaaactaggatgattagatcttgctactattttgccaagttatatgggtaagaaagagtatgtaccctttgcattggcaaacggaaacttagctgttcatgttggtgtgctgcagaagggattacatcagatctttttgctactgattgaagttgcaaaactttcttttggaaggcaaaggcatgtgcttcggttgtaaaagtacgtactgtatcacatagtaggtggtttctgggtgctgaaccagaagaactacatttgtatatatgggctcctgggttgtgtcagctcagccttccttcaaaccatatgacacccaacccaaatgcagcctgcactgcaggtaggtaaaatgtctacctgtagtttgttctgtatttcttttttgtactatatcactgttaggacaaatgtttggataaggtgactgttgattttgctgtgttttcgagtacggggagatgattttgatgccccaacaagcaaggtcttcgagattgcaggacagggcaggacaatgcttggatcgatgacgaaggtgcatgcatgaatgcatgattggtgaaattaagtaagcaaatctttgggacacttgacatagccaaaacgggctgctttccatatctatcaaacatgcatcactttggttgaaatgggtccgaccgacagcataaacacaacttgctcaacttgttgcccatcaataataatattaaagcctgtctctctgtctgcctgataacatagcagtgataattgatattaaggccttgtttatttgggg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0570600, RefSeq:Os09g0570600