Os09g0570900

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Revision as of 07:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0570900| Description = Amino acid-binding ACT domain containing protein| Version = NM_001070525.1 GI:115480792 GeneID:4347917| Length = 449...")
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Gene Name

Os09g0570900

Description

Amino acid-binding ACT domain containing protein

Version

NM_001070525.1 GI:115480792 GeneID:4347917

Length

4498 bp

Definition

Oryza sativa Japonica Group Os09g0570900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23624906..23629403

Sequence Coding Region

23625197..23625346,23625449..23625733,23625833..23626160,23628191..23628296,23628640..23628894
,23628983..23629142

Expression

GEO Profiles:Os09g0570900

Genome Context

<gbrowseImage1> name=NC_008402:23624906..23629403 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23624906..23629403 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggattccgaatcccagcgacgaggtggtgcaagtccggcacggcgatgtcgccggcgagccaaccgtggtgaccattagctgccccgacaagacgggcctcggctgcgacctctgccgccttgtcctcctcttcggcctcaacatcgtcaagggagacatgagcactgatgggaggtggtgctacatcgtgctgtgggtggttgcaaggcccggccgcgccatggcaatgagatgggacctcctcaaggacaggttgatccagctctgccctgtcgccgcgccattcggcctcgacaaccaccacctcgccgccgctggtctccacctccacgaccacgatgcacctgccccctctcccaacatcttcttgctcaaattcttctgctacgaccgtatgggcctcttgcatgacgtgacacgagtgctgtgcgaactggaactcacaattcgtagagtgaaggtctccaccacacctgatgggagagtgctggatcttttcttcatcacagatgctagggaacttctacatacaaagagcagaagggaagagacctatgacaaacttcagagtgttttaggtgactccttgacaagctgtgaaatagaatctgctacggaggaaatgtcctcttgcctccaagcttctactttgttgccacattctgcggtggaagagatgtttaacgtagaggttgtcgaggagcaatccaggtcttgtggtggtttgtcagttgcaatggacaactctcttagtcctgcgcacactcttattcagatccagtgtggtgaccataaaggcctcgtatatgacatcatgagaacactcaaggactgtaacatccagatttcgtatggacgattctatgccagccagaatgggagctgtgaggtagatttgtttgctgtgcaatcagatgggaagaagatcgttgaccagcacaagcaaagagcgctgtgttgtcggctgaggacagagctccaccgtccgctgcgcgtggcattggtaaacagaggccctgacacggaactgctggtggctaacccagtggaggtgtcgggcaagggtagaccgctggtgttctacgacatcacccttgctctcaagaagcttcacaaacggatcttcttggctgagattggtcggcatgtggtgggtgatagggaatgggaggtttacagggtgcaccttggtgagggagatcattcttcattgcggagcaagattgttgatggagtcaccaacatgctcatgggctgggacgacactcctccatcctaa</cdnaseq>

Protein Sequence

<aaseq>MGIPNPSDEVVQVRHGDVAGEPTVVTISCPDKTGLGCDLCRLVL LFGLNIVKGDMSTDGRWCYIVLWVVARPGRAMAMRWDLLKDRLIQLCPVAAPFGLDNH HLAAAGLHLHDHDAPAPSPNIFLLKFFCYDRMGLLHDVTRVLCELELTIRRVKVSTTP DGRVLDLFFITDARELLHTKSRREETYDKLQSVLGDSLTSCEIESATEEMSSCLQAST LLPHSAVEEMFNVEVVEEQSRSCGGLSVAMDNSLSPAHTLIQIQCGDHKGLVYDIMRT LKDCNIQISYGRFYASQNGSCEVDLFAVQSDGKKIVDQHKQRALCCRLRTELHRPLRV ALVNRGPDTELLVANPVEVSGKGRPLVFYDITLALKKLHKRIFLAEIGRHVVGDREWE VYRVHLGEGDHSSLRSKIVDGVTNMLMGWDDTPPS</aaseq>

Gene Sequence

<dnaseqindica>4058..4207#3671..3955#3244..3571#1108..1213#510..764#262..421#gaagattcctcgtctcgcttcgctcttgctcttgactccgctctacccgccgccgccgcccaaacgaccaaacgacctcctccttgttcggactttggagcaagcaaaagcaatcgcaattagcaacacatcaatcaaatcctttgttagatttgatgcgagcgtcctccaatccaagattaatttccatctattattagggtactcctacgaaacaacaagtagctagctattagtgagtgagtggagattgagaattggatggggattccgaatcccagcgacgaggtggtgcaagtccggcacggcgatgtcgccggcgagccaaccgtggtgaccattagctgccccgacaagacgggcctcggctgcgacctctgccgccttgtcctcctcttcggcctcaacatcgtcaagggaggtaaaatatataacattcctctagtattccctcttctttcctcattatagcagtccaagagaagagattggattggattggattgtagacatgagcactgatgggaggtggtgctacatcgtgctgtgggtggttgcaaggcccggccgcgccatggcaatgagatgggacctcctcaaggacaggttgatccagctctgccctgtcgccgcgccattcggcctcgacaaccaccacctcgccgccgctggtctccacctccacgaccacgatgcacctgccccctctcccaacatcttcttgctcaaattcttctgctacgaccgtatgggcctcttgcatggtggagtactcactaccttttcttttcttttcatttctctgccccatgggtttccttttacttttttgagccctaatctcaccacacaatgatgaatgaaattaccaagttagcaaccaattcatatgccccaatctctttgcaacaaactgatttactagtttagccataaaccttttcttcagcttcatttcttcaaaatgttgcttcaattcctcacaagacttaggagctcaggattactagcgagctaagccctaaaaaaaatatttaagtgcttccagtgaagatattttactagaaaaaggcctaatttggagctgcttgcttctgtgctttgcagacgtgacacgagtgctgtgcgaactggaactcacaattcgtagagtgaaggtctccaccacacctgatgggagagtgctggatcttttcttcatcacagatgctaggtccacttcttatctccccacacatccttttcactactcccatccagattcttttgctataattcccagaacaaaatattatcttttcacaaatatcccgccatactttctcttaacccttgcaaagttgcttattgtttggttctgcctctctactgaaacttacatggttgctgattatacacttcttcctgagggatgtgctattcattcttctaggtaggtagttatagaggagtatcattgcaatagtatatacaacagtatcttgttcatgtagcaactagctgtcatgtaactgggccggattggtatgcatattgagctcagggctggctaggcccaatccggcgacaagccgaccactccagccactacaaaaggagcagagccaacaaatggggagggaacagaacagaacagatgaaacttgacttcttccttccgatgctctctcttcttcaacctctgtatctctcttctcttctccaatctctagctatgtcttcttctccaacctactgctgattctcagtcttgattccttttcccccatttgtatccccaaatactcatgtatcgagtgttggaggaagaattgtttgcttgtgcaggaattcactaaatcacatggagtggattcgtaacactagcctgacagggtgaatacatccattcttccttttttcagataaatctggttgactaggtaggtaggtgagaaattcagtattttccatccaattcactggcccgtaagcctttcaaattttgccatcaggactgcgaatttcttcattccgtgctacttccctcagtttgagtgtgtcatccgtctgtgttcgcctgtcagctggcactgccactcttgctaggtgtagccgacacctgccattgccgctcagccggaaaacattttcccctccacaagagaccaaatctatgcaatcagatcatcaagaaccagatcgccatggctgaaaggctcagaatcaactctggaggagtttatactacgattaccaaagaaaagcacaaaattgagagcatgctagaacaaacaagcacaagagaatgtacgggacagtggcgtccatcggcgggcagggagcaggaaacaaactccatcccaccgaatttcgcttgactttcgcttgactttgccgctgtttttctgatctaaaagaatccaaagaaaaggagaaggggatccttgttgggagcagagccatcgccattgccatggcgctgaaccgattcacccaatggctgaggccagtgagcatggtgcatgtggcgacgatggacgagctctcgagtaccctaggagccagcgctggcgagcgcagctgtggaacgccgggaacagccactgccaccatggaagcagtcgtgcggagcccacagcagaacggctgaggaagggcattcgatatagttaccgtgccatctgacggcagtgggtgcctgtccactggcaggaggagctgtcgctggaggctagagctgcagacggacgacgacccccaagagctgcttcacggtcctcgtgcggtgctactgttgggatgcccgaggcaaggggccagcgggctgaacggcaacaccagcgatggggtgaacagatggacgtgtcagcaggcagacggacggacggacaaacttagacagacgatgcgctcgaaccgaaaggaagtggcacggaatgaagaaattcgcagtcctgatggtaaaattgaaaggcttatagatcaaatggtaatttcttaaagggcggcaaattggatggcaaatactgttacaaaggatcttcagtttggtgcaatttatgttcagcaagttctatcatgtgaagtataatctccatgcctggaacagtgctgaatgctttatctgtttctgtacagtaaaatggggcttggttgtaagccctttgtttgtgcaaaataatcttcacgtcctttttatgtaatgtaaatgatcaaaactctcatgcatgttatatcttacgacgtttgcaatgacctcagggaacttctacatacaaagagcagaagggaagagacctatgacaaacttcagagtgttttaggtgactccttgacaagctgtgaaatagaatctgctacggaggaaatgtcctcttgcctccaagcttctactttgttgccacattctgcggtggaagagatgtttaacgtagaggttgtcgaggagcaatccaggtcttgtggtggtttgtcagttgcaatggacaactctcttagtcctgcgcacactcttattcagatccagtgtggtgaccataaaggcctcgtatatgacatcatgagaacactcaaggactgtaacatccaggtaaccacaagagaagaatgatttggttcgaagataccaagttttgttggctttttttttggaatagtatgtatgaagaatgttcaattttggtttcagatttcgtatggacgattctatgccagccagaatgggagctgtgaggtagatttgtttgctgtgcaatcagatgggaagaagatcgttgaccagcacaagcaaagagcgctgtgttgtcggctgaggacagagctccaccgtccgctgcgcgtggcattggtaaacagaggccctgacacggaactgctggtggctaacccagtggaggtgtcgggcaagggtagaccgctggtgttctacgacatcacccttgctctcaagaagcttcacaaacggatcttcttggtacgcatttcaacttactactgtatctgtataacttacttgcatttgtgccttgagtcctttaccatcgattgattgacgacacctgttgcatgcatgtaggctgagattggtcggcatgtggtgggtgatagggaatgggaggtttacagggtgcaccttggtgagggagatcattcttcattgcggagcaagattgttgatggagtcaccaacatgctcatgggctgggacgacactcctccatcctaatcctactagtagtagttctagttagtttttttatggaacacacgtcctttgccttgtacatagttggtagtggctgctgtaaattgtgtgccttgttaagtcgttcgtggtagaatgcgttggcagtagctagctttgactaatcaatcagcagctaatttcagtctgtttagttagggagcactcccctctagttgtatcactatcaaaactgaatagtgctcaagttatctaacaggaggaaatgcttactcctaattactaaagtggtagtgcccgcaattagtaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0570900, RefSeq:Os09g0570900