Os09g0572550

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Revision as of 07:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0572550| Description = Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1)| Version = NM_001189071...")
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Gene Name

Os09g0572550

Description

Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1)

Version

NM_001189071.1 GI:297727272 GeneID:9269899

Length

1734 bp

Definition

Oryza sativa Japonica Group Os09g0572550, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23734579..23736312

Sequence Coding Region

23735225..23736289

Expression

GEO Profiles:Os09g0572550

Genome Context

<gbrowseImage1> name=NC_008402:23734579..23736312 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23734579..23736312 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttatgcggcggggcgttggtcatcgtcgtcgtcctccggcggctgcagcttctggggacgaggggcaggctcggaggaggcgccggcgacggtgaggtactcgagcgcggtgacgacgtcgctgatggcagggcgcatggtggcgtcctcctggaggcacatggcggcgatggcgagggcctggtagaggcccttggtggggtaggcgccgcggagcaaggggtcggccatgtcggcgaagagcttcttgtccttgaagcgcggggcggcccactggacgaggttctgctcatcgtgagggcgggccatgtcgatggcgcggcggccggtgatgatctcgaggaagacgacgccgaagctgtagacgtcggagcaggtggtgagcttgccggtgagagcgtactcgggggcgcagtagccgtaggtgcccatgacgcgggtggagacgtgggtcttgtcgccgacggggccgaccttggcgaggccgaagtcggagaggcgggcctggaaggaggagtcgaggaggatgttggaggccttgaagtcgcggtagatgacggggggacgagctgcgtcgtgcaggtgctcaaggccgcgggcggcgccctgcgcgatgcgcatccgagtggtccagtccagagccgcggcgccagggggcaggtcaagcaggtggtcctccagggagccgcgggccatgtactcgtacaccaggatgcggtggtcgccgtcggtgcagtaccccagcagcgtcaccaggtttgggtgctccgccagcaggctcagcatcagcacctccacaaggaactcccggttcccctgcatcccgttccggtccagctgcttcaccgccgcctccgtcaccgtccccttgatgctcagcctcccccggtacaccggcccgaaccctccctcccccagcagcgactccgccctgaacccgcccgtcgcctccgacagctcgccgtacgtgaacgcccgcgccgtcaccttccccttgccgatcttcaggatctcgtccgccacgcgcttgtgccggtaagtcactgtccattcatttatccatga</cdnaseq>

Protein Sequence

<aaseq>LCGGALVIVVVLRRLQLLGTRGRLGGGAGDGEVLERGDDVADGR AHGGVLLEAHGGDGEGLVEALGGVGAAEQGVGHVGEELLVLEARGGPLDEVLLIVRAG HVDGAAAGDDLEEDDAEAVDVGAGGELAGESVLGGAVAVGAHDAGGDVGLVADGADLG EAEVGEAGLEGGVEEDVGGLEVAVDDGGTSCVVQVLKAAGGALRDAHPSGPVQSRGAR GQVKQVVLQGAAGHVLVHQDAVVAVGAVPQQRHQVWVLRQQAQHQHLHKELPVPLHPV PVQLLHRRLRHRPLDAQPPPVHRPEPSLPQQRLRPEPARRLRQLAVRERPRRHLPLAD LQDLVRHALVPVSHCPFIYP</aaseq>

Gene Sequence

<dnaseqindica>24..1088#agagagacgatcgatatgattgattatgcggcggggcgttggtcatcgtcgtcgtcctccggcggctgcagcttctggggacgaggggcaggctcggaggaggcgccggcgacggtgaggtactcgagcgcggtgacgacgtcgctgatggcagggcgcatggtggcgtcctcctggaggcacatggcggcgatggcgagggcctggtagaggcccttggtggggtaggcgccgcggagcaaggggtcggccatgtcggcgaagagcttcttgtccttgaagcgcggggcggcccactggacgaggttctgctcatcgtgagggcgggccatgtcgatggcgcggcggccggtgatgatctcgaggaagacgacgccgaagctgtagacgtcggagcaggtggtgagcttgccggtgagagcgtactcgggggcgcagtagccgtaggtgcccatgacgcgggtggagacgtgggtcttgtcgccgacggggccgaccttggcgaggccgaagtcggagaggcgggcctggaaggaggagtcgaggaggatgttggaggccttgaagtcgcggtagatgacggggggacgagctgcgtcgtgcaggtgctcaaggccgcgggcggcgccctgcgcgatgcgcatccgagtggtccagtccagagccgcggcgccagggggcaggtcaagcaggtggtcctccagggagccgcgggccatgtactcgtacaccaggatgcggtggtcgccgtcggtgcagtaccccagcagcgtcaccaggtttgggtgctccgccagcaggctcagcatcagcacctccacaaggaactcccggttcccctgcatcccgttccggtccagctgcttcaccgccgcctccgtcaccgtccccttgatgctcagcctcccccggtacaccggcccgaaccctccctcccccagcagcgactccgccctgaacccgcccgtcgcctccgacagctcgccgtacgtgaacgcccgcgccgtcaccttccccttgccgatcttcaggatctcgtccgccacgcgcttgtgccggtaagtcactgtccattcatttatccatgaaaatatacaatgtttgtttctttgtttgttgtattccgaaaatgtaaatatatggagtagcttagctaactaactaggagtacatacgatacctgactctgccacgatctcgttcaccaggttcaccaggttgctgttgttgtccctgctgctcccgcccaggctccgctccgacgctaaattcttcttcttgctgctgctgctgctgttgctgcagccgctagaggaggtcgagggaggcgctccgtcgccatcgccgtccccgtcgcctcctctgtcctcggactggaagcagcagaagatgcccattatatttatggtgtgctgggccctccaccaacgccaacaggaacgaatcctggaaccagagggatgatcctccaactctgctcctcaaccagcatccggttccaaactgataaggcctagccagccagccaccaatctgatgatcgatgatcgataacaaagggatgtataattttaattgagattatcaaggatgatcgccggacggcgagcttgtaccgtacgtacaaactgccgacgagcgaggcgcgcgcgcgcgaatggaatggggaaatccgattgcttaataacctttctggcattgcccattggaatggatggggtaaattaattcgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0572550, RefSeq:Os09g0572550