Os09g0572900

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Revision as of 07:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0572900| Description = Similar to Dynamin-related protein 1E (Dynamin-like protein E) (Dynamin-like protein 4) (Dynamin-like protein DLP2)| ...")
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Gene Name

Os09g0572900

Description

Similar to Dynamin-related protein 1E (Dynamin-like protein E) (Dynamin-like protein 4) (Dynamin-like protein DLP2)

Version

NM_001070537.1 GI:115480816 GeneID:4347929

Length

5166 bp

Definition

Oryza sativa Japonica Group Os09g0572900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23743207..23748372

Sequence Coding Region

23743476..23743604,23743694..23744095,23744176..23744226,23744510..23744735,23745254..23745324
,23745446..23745565,23745653..23745847,23746030..23746094,23746341..23746431
,23746646..23746707,23746831..23746881,23747361..23747462,23747726..23747833
,23747911..23747974,23748139..23748282

Expression

GEO Profiles:Os09g0572900

Genome Context

<gbrowseImage1> name=NC_008402:23743207..23748372 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23743207..23748372 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcatggagggtctgatcggcctgatgaaccgcatccagcgagcctgcaccgccctcggagaccacggaggtggagaaggagccaacctccctaccctctgggagtctctccccaccatcgccgtcgtcggaggccagagttcgggcaagtcctccgtgctagagagcattgttggcagagatttccttccccgtggttctggaatcgtgacacggaggccattagttcttcagctgcatcagatcgacaaaggggcccacgattatgcagagttcttacacttgcccaaaacaaggttttcagattttgctcttgttcgtcaagaaattgcagatgagacagatagagtgactgggaaaactaaacaaatatcccctgtgccaatacatctcagcatctactcacccaacgtcgtgaacttaacattgattgatcttcctggattgacaaaagtcgctgtagagggacaacctgaaagtgttgttcatgatatagagaatatggttcggtcgtatgttgagaagcccaattgtatcattttggctatatctccagcaaaccaggacattgccacttctgatgccattaagctttcgaaggaggttgacccatcaggtgagaggacattcggtgtgttgacaaagttggacttgatggacaagggaacaaacgctcttgatgttcttgagggaagagcctatcgtcttcagtatccgtgggttggaattgtcaaccgctcacaagcagatattaacaggaaagttgatatgattgttgcaagagaaaaggaaagagagtattttgaaaatagtcctgattatgcacacctagccagtaagatgggttctgtgtatctagctaagcttctttctcagcatcttgaagccgttattaaagcacgcattcctagcatcacatcattaatcaacaaaactatagatgaacttgaatcggagctggataccattgggaaagaagtggctgctgatccaggggctcaactgtacactatattggagctctgtcgtgcttttgaccgtgttttcaaggaacatctggacggagggagatcaggtggtgataaaatttatggcgtgtttgatcataagctccctgccgcttttaggaagctgccttttgatcgttatctatccgtgcaaaatgtgaagaaggtggtatcagaagcagatggctatcagcctcatcttattgctcctgaacaaggttaccgtcgtcttgttgaagccggccttgcgtatttcaagggaccagctgaagctacagtcgatgcggtccatgttgttttaagggacttggtgaggaaatccataggagagacagagccactgagaagattccctaccctgcaagctgcgattgcaactgctgctaatgaagctctggaaaggtttcgggaggatggacgtagcactgcacttcggcttgttgacatggaggcatatttgacagtggaattcttccggaaactcccgcaagatccagatagtggcagcaaggttgggaataataccaatgaatccaatggctcaggctcaggctcagtgacagtggaccgctacggcgacgggcactacaggaatatcgcgtccaatgtgtcccagtacataaagatggtgggagaccaactgttacacaagatcccaaaggcggtggtgcactgtcaggtccgagaagccaagaggtctctgcttaaccatttctacgtgcacatcgggaagaaagaggcgagccagtttgggcatttactggatgaggacccagcgatgcttgagcgtaggcagcaatgctggaagaggttggagctgtacaaatcggctagggatgaaatcgactctgtcgcatggaccaggtag</cdnaseq>

Protein Sequence

<aaseq>MASMEGLIGLMNRIQRACTALGDHGGGEGANLPTLWESLPTIAV VGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHQIDKGAHDYAEFLHLPKTRF SDFALVRQEIADETDRVTGKTKQISPVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQP ESVVHDIENMVRSYVEKPNCIILAISPANQDIATSDAIKLSKEVDPSGERTFGVLTKL DLMDKGTNALDVLEGRAYRLQYPWVGIVNRSQADINRKVDMIVAREKEREYFENSPDY AHLASKMGSVYLAKLLSQHLEAVIKARIPSITSLINKTIDELESELDTIGKEVAADPG AQLYTILELCRAFDRVFKEHLDGGRSGGDKIYGVFDHKLPAAFRKLPFDRYLSVQNVK KVVSEADGYQPHLIAPEQGYRRLVEAGLAYFKGPAEATVDAVHVVLRDLVRKSIGETE PLRRFPTLQAAIATAANEALERFREDGRSTALRLVDMEAYLTVEFFRKLPQDPDSGSK VGNNTNESNGSGSGSVTVDRYGDGHYRNIASNVSQYIKMVGDQLLHKIPKAVVHCQVR EAKRSLLNHFYVHIGKKEASQFGHLLDEDPAMLERRQQCWKRLELYKSARDEIDSVAW TR</aaseq>

Gene Sequence

<dnaseqindica>4769..4897#4278..4679#4147..4197#3638..3863#3049..3119#2808..2927#2526..2720#2279..2343#1942..2032#1666..1727#1492..1542#911..1012#540..647#399..462#91..234#ctttcttgtctactagtcttctactggagtaggttctacgagacacaaattagacaggagagatcgagtttgaaggcaggaaggcaggcgatggcgagcatggagggtctgatcggcctgatgaaccgcatccagcgagcctgcaccgccctcggagaccacggaggtggagaaggagccaacctccctaccctctgggagtctctccccaccatcgccgtcgtcggaggccaggtcatttgcttccttccttccttgcttcaattaaatggattttttcttttctctttaaccttattattatttttattattatactcctatgattaatgatgcatggattggatgctgatttctagactttgtaattcatttcattttggcttgtgcacaaacagagttcgggcaagtcctccgtgctagagagcattgttggcagagatttccttccccgtggttctggtaattataataacctcattcaccccagtttccctttcaacactatcttacctcccctcatctatcatctaatctaggaatcgtgacacggaggccattagttcttcagctgcatcagatcgacaaaggggcccacgattatgcagagttcttacacttgcccaaaacaaggttttcagattttggtgcgaacttgaaatcaatccttccccgttaatttctttatacagctttgcaatattgtaatgtaaacctcacatctctgtatcctgctgtttcttgcaaataatgctttagttcaagtgtctgtcctattgcactattctgtttccactgctttatttctgatttaaaatagcactgccaaacttatatatcaacatctttctaaaacaaaaggaaaacttatacttaacagcaccacttatttttctctactgtggtgtagctcttgttcgtcaagaaattgcagatgagacagatagagtgactgggaaaactaaacaaatatcccctgtgccaatacatctcagcatctactcacccaacggtaacctcttcctgttgcaaatgtgcaacctatgttgtaatcccctcccagaaatgtatctccatcttgcaaattgaattgaactattctctggaccacccgagccctgcgattgtgtttcactggtggaactctgttaaccctgtaacataaactttttgaaatgtatgggatcttcacgaagaaagaaagttttaggtgggccagtttgcggcctttcatataatcttcaaaagatactctatgagtatatctggacattaagatgctttgaatgatataccatgcatgcaatagttttgtgattatccaagtttgtagctttctacagtttatccagattctctcatactatataggattttgaatcattgtcaaagactcctcaatttagactaggatttttaatgtctgcttcacatatttctctcatactatacattgattggctaatagtagtttactcccatatgttgcagtcgtgaacttaacattgattgatcttcctggattgacaaaagtcgctgtaggtatgcactattatgtccttttttaatcaaagatttaattctctctcttttgatactgtgtttagtttatcgtgcatcccccccccccaccttcctctaacttgttcaacttctaattcacagagggacaacctgaaagtgttgttcatgatatagagaatatggttcggtcgtatgttgagaaggtaatcaacaaacgaagtagcattttttttaataccatgtcttcagcattcttgtactagtagcaaattgatgacattaacttggctgctgttttggttgtttaattattcacacccaaataactttaggtgttatattgtttaattaatttctggtgttcaaatttgagaacttatacaaggctaataggttactttgtatgatattttgcagcccaattgtatcattttggctatatctccagcaaaccaggacattgccacttctgatgccattaagctttcgaaggaggttgacccatcaggtactaaaattcagtgcacatagagggcaagagatagtgactcttttacttttattttctgcggagaactcatacaaataaagtaaagtatgttgctgtaaactttgatggtttgttatagctctacagctaagattgttatcttctacagaatgctgcagaatagtttgcttttatcatgatcctatctgactggatttaccatccatttttattttctggatgacaatttttctcttttacaaggtgagaggacattcggtgtgttgacaaagttggacttgatggacaagggaacaaacgctcttgatgtaagattgaacttgcctgccctgacaaacagtagtctgtctgcacattgtcagtttcagaatatctacatgcagcctttttttgttcttaatgttcatatcatacctctgacctgtcatttatctgtaaatttaaccttgttctatctggactacctcgactattttcatttcccccaaaggttcttgagggaagagcctatcgtcttcagtatccgtgggttggaattgtcaaccgctcacaagcagatattaacaggaaagttgatatgattgttgcaagagaaaaggaaagagagtattttgaaaatagtcctgattatgcacacctagccagtaagatgggttctgtgtatctagctaagcttctttctcaggtacctcaaacttgaaatttctcgtttctttgagttggtatatgagcaaggcttaggacttgcataattgctttataacattttcagcatcttgaagccgttattaaagcacgcattcctagcatcacatcattaatcaacaaaactatagatgaacttgaatcggagctggataccattgggaaagaagtggctgctgatccaggggtcagtcattcatatatattttgtactaaaagtagtttttgccgggtctgtactaaaagtagttacaggagtatttgtcttgttcaattttatattcaccgcttccataatgttgtgccaggctcaactgtacactatattggagctctgtcgtgcttttgaccgtgttttcaaggaacatctggacggagggtgggtaattaattatctgtcatcatcttaatggcttcttgtatctctcttctaattatgtaaagcgctttaggttcagttctaggttttcattttagaaatacttatcgttatcataatattttgacttgttgcataaatgttgcttatgaaccataggtagttgcatggcgtatcaacatcactcgtctcaggataatacatgctgaaagtgcacctgtttatgttgagttcccgggacttatattgtatcttccatgtgaacatgaaaagaatttacagaacatgcctatcttttcagaagatggaagtgcatacttcataatgtgtaaacggatttagtcaaaaaaaataatgtgtaaacagaatttataaagtgttcataagttttatacgacaccaatatacctagatttttttttaattagttgtcatttaatatgatgagatcttgtccaattacaatattataacgttcattttactcctttaactgtttgggtgcctaactgttgcaggagatcaggtggtgataaaatttatggcgtgtttgatcataagctccctgccgcttttaggaagctgccttttgatcgttatctatccgtgcaaaatgtgaagaaggtggtatcagaagcagatggctatcagcctcatcttattgctcctgaacaaggttaccgtcgtcttgttgaagccggccttgcgtatttcaagggaccagctgaagctacagtcgatgcggtagctgactttctatatatacatctgtgctgattgatttgttgtccgttagtttctttaatcagtggccaccaggccagtagagtaggcactttgtgctgtacgctttacttcctggagtatatatatgctagtagttatatttgatatgtgccaattaataatactctgatgttggtgttaggtgcgcatttgatgaggtgtcctagcttccaaacctttggaaggaataatgctatatatcccaatgtgtctgatctgccaaatatattatttttttcaggtccatgttgttttaagggacttggtgaggaaatccataggagagacagaggttaggaagaatgaatatatccatatttctttgtgtttttggaaaatggtactttatatatgttttctcactaattgcagccactgagaagattccctaccctgcaagctgcgattgcaactgctgctaatgaagctctggaaaggtttcgggaggatggacgtagcactgcacttcggcttgttgacatggaggcatatttgacagtggaattcttccggaaactcccgcaagatccagatagtggcagcaaggttgggaataataccaatgaatccaatggctcaggctcaggctcagtgacagtggaccgctacggcgacgggcactacaggaatatcgcgtccaatgtgtcccagtacataaagatggtgggagaccaactgttacacaagatcccaaaggcggtggtgcactgtcaggtccgagaagccaagaggtctctgcttaaccatttctacgtgcacatcgggaagaaagaggtactaattaactagtagtagtagttaatctccttgtcatctagggtgaatgcatggaatggaagtaatgagttttgtggttggagcaggcgagccagtttgggcatttactggatgaggacccagcgatgcttgagcgtaggcagcaatgctggaagaggttggagctgtacaaatcggctagggatgaaatcgactctgtcgcatggaccaggtagacacaaacatatacatggtggctagtatcttttgtcgcagctgcgtgtagtttggtttgggcagatctaacttccatttgtcaggcaggcactattttcccttggtatatagtatatactatactatcttacgaattgatggacgttatatatctgtatattttgtcagtagatcatccttcgtacatgtgcaccccgacccgtgccatgctggtttcaacagtttttcttttgttattctttctagtggttggcttctctctgttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0572900, RefSeq:Os09g0572900