Os10g0100500

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Revision as of 08:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0100500| Description = Protein kinase-like domain containing protein| Version = NM_001070544.1 GI:115480831 GeneID:4347936| Length = 5851 b...")
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Gene Name

Os10g0100500

Description

Protein kinase-like domain containing protein

Version

NM_001070544.1 GI:115480831 GeneID:4347936

Length

5851 bp

Definition

Oryza sativa Japonica Group Os10g0100500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:46151..52001

Sequence Coding Region

46158..46428,46588..46706,46819..46928,48977..49415,49511..49633
,49805..50350,50729..51398,51512..51669

Expression

GEO Profiles:Os10g0100500

Genome Context

<gbrowseImage1> name=NC_008403:46151..52001 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:46151..52001 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagatacttagcccgtcgccgccgcccagccccggccccgcctccgcctccgcctccgcctccggctccgccatggattccttcatccacagaggtgccggctggcatttcccccgccgcgacaacgtcgacgcgcgggtccatgtcgccgtcgggaggtcgccggagaagacgttgggcctgctgcgatgggccttccgccgcttcgcctgcgcccaagtcgtcctcgtgcacgtccaccaaccttctccgctcatccctaccctcttaggcaagattcctgccgctcaagccaccgaagagctcgtgctgtcgcatcgcaaatccgagaaggacgaaatgaacaagatcctcctcacctacctcactttctgtcacagggcacaggttcaggcaagtcttcttgtcacggagaatgaacaaatccatgatggtattatcactttggtcaaagatcatgggattacaaagcttgtcatgggttctacacctgatacttgcttcaagttgaaagcgagctatggcaaagcatcttttatggcaaggaatgccccatcattttgtgaaatctggtttgtttggagaggaagacacatttggaccagagaagcagctgcagccattggcaacaatatctcagtttacaatgaagatgatgttatgatcaggaaaagaatcaggttcagctctactagtaacaatgctgaatccatacttgatgaaggatacatttcatacgaggcacaaacacctgctgatcgttatgaaatcaccatttcagataatggtcaaccgaatgattatgaatctcttgttgatgccaaccatttctgcaatattattgtaccaaatttgcaaaatgcacagtctgcatttaactcaacattccagcctggttcttctgtagacatggaatcattagtgttatatcctcaggaaatcttggataaaaatttcaagcaggtcattctagaagcagagagatcaaggaaggatgcttttgttgagcttctcaagcgcaaagatacagagtcaagagtagccggtgttattgccagggcaaaagcttctgagttcgctcaaaaacaagaaatgaaaatgcgggaggaacttgaagctttgttgacagccacaaaaaagcagcatgaagatcttgcagaaaataaagaaaaggctacagaagggttggactcttcgatgagaaaactagccatcctagatgcacgtgctaaaagcatagcttttcggatgaatgaagctgtggcagagctgaaattgattcaatcttccataggaacactcaatcaggaaattcccaaaagagagaagctagaacttgtacatactgaccaggttgaaaggtgtgcatataaccacattatgttaccaaattgcagttcaactgtttgtgctgatgacttgtacaactttagagaattgactttgtcagatattaaagctgcaacatgcaagttctcagacagcttaaaagtactgccacgaggtcttggatgtgtttataaaggagagattatgaacagaagtgtaatgatttataagttgcactcgtgtatcattcagagttcgatgcagttccagcaagaggtccacctcattagcaaggtgaggcaccctcacctggtgactttgattggggcatgcccggatgcattgtgtcttgtctatgaatacgtgccaaacgggagccttcacgaccgcctttggagcaagtgcggcattcctcagttgccatggaaaatccgtgcacgtattgttgctgaaatctcaagtgctctattcttcttgcattcctgtaaacctcagatgattgtccacggtgacttgaagcttgaaaacatccttttagatgccaacctgcactgcaagatagctgattgtggtatttctcaattattcatggaagatgccaaggacgcagacccggaataccggagaagcaaaccattgacacccaaatctgacatatactcctttgggattgtgatactccagttactaactgggaagcaggctgcaggccttcccagcgaagtaaggcgtgcaatgtccagtggaaagctatggtcattgttagatccaacagctggagagtggcctctggaggtggctcgaaggttagcagagttggggctcaagtgcagtgaggcagcaagtccagagctgctgactccagaaactgtgcgagatctggaacagctccacctgatgagggataatagacaagtgccctccttcttcctgtgcccgatcctcaaggaagtgatgcatgatccccaggtgggggcggacgggttgacgtacgaagggcgcgccatttccgagttgatggacaatggccctccaatcacccccaaccacgcccttcgttttgccatccatgactggctctctcagagatcaactcctttctga</cdnaseq>

Protein Sequence

<aaseq>MEILSPSPPPSPGPASASASASGSAMDSFIHRGAGWHFPRRDNV DARVHVAVGRSPEKTLGLLRWAFRRFACAQVVLVHVHQPSPLIPTLLGKIPAAQATEE LVLSHRKSEKDEMNKILLTYLTFCHRAQVQASLLVTENEQIHDGIITLVKDHGITKLV MGSTPDTCFKLKASYGKASFMARNAPSFCEIWFVWRGRHIWTREAAAAIGNNISVYNE DDVMIRKRIRFSSTSNNAESILDEGYISYEAQTPADRYEITISDNGQPNDYESLVDAN HFCNIIVPNLQNAQSAFNSTFQPGSSVDMESLVLYPQEILDKNFKQVILEAERSRKDA FVELLKRKDTESRVAGVIARAKASEFAQKQEMKMREELEALLTATKKQHEDLAENKEK ATEGLDSSMRKLAILDARAKSIAFRMNEAVAELKLIQSSIGTLNQEIPKREKLELVHT DQVERCAYNHIMLPNCSSTVCADDLYNFRELTLSDIKAATCKFSDSLKVLPRGLGCVY KGEIMNRSVMIYKLHSCIIQSSMQFQQEVHLISKVRHPHLVTLIGACPDALCLVYEYV PNGSLHDRLWSKCGIPQLPWKIRARIVAEISSALFFLHSCKPQMIVHGDLKLENILLD ANLHCKIADCGISQLFMEDAKDADPEYRRSKPLTPKSDIYSFGIVILQLLTGKQAAGL PSEVRRAMSSGKLWSLLDPTAGEWPLEVARRLAELGLKCSEAASPELLTPETVRDLEQ LHLMRDNRQVPSFFLCPILKEVMHDPQVGADGLTYEGRAISELMDNGPPITPNHALRF AIHDWLSQRSTPF</aaseq>

Gene Sequence

<dnaseqindica>8..278#438..556#669..778#2827..3265#3361..3483#3655..4200#4579..5248#5362..5519#tccatccatggagatacttagcccgtcgccgccgcccagccccggccccgcctccgcctccgcctccgcctccggctccgccatggattccttcatccacagaggtgccggctggcatttcccccgccgcgacaacgtcgacgcgcgggtccatgtcgccgtcgggaggtcgccggagaagacgttgggcctgctgcgatgggccttccgccgcttcgcctgcgcccaagtcgtcctcgtgcacgtccaccaaccttctccgctcatccctaccctctgtacgattctagtgtttcaattccttctttctttctttctttcttggagtatttatttatttatgagttaatttctcgattcttccttctccgccgctcacggctcacccatcacatcttcttcttcttcttcttcttcttcttcttcttcttcttcagtaggcaagattcctgccgctcaagccaccgaagagctcgtgctgtcgcatcgcaaatccgagaaggacgaaatgaacaagatcctcctcacctacctcactttctgtcacagggcacaggtaagtgctactcaccttcttctccaaccttttttttatctaggagaaacatcacagattcaatttttatgggtgtgcgacgctaattaatcgggcttttgctctgccacaggttcaggcaagtcttcttgtcacggagaatgaacaaatccatgatggtattatcactttggtcaaagatcatgggattacaaagcttgtcatgggttctacacctgatacgtatgtactacttcaattttcatcaattgcgtgctaacaaaacacccttcttgatagtgccatctctataaaacaattcaaactctctgttctacacaaggaattctactgttagttcaaatatatcgctgctaaaattcgtgtatcctgttcttacaaacctgcttcaaaccagccgttttcagtccccacatgctgtcatgttatgcattctttattaatggtcacgggcatatggctaacagcaggtcctactaccatgatttgaagtttcatctttggcccctagctgatggtccaatcagtggcggcgccaagagttttgtgaagccaaggcgggtctaactgaaactattacactcaaaacatgttcattttccatatatcaccattaaaattttctaccatttttttttatagaaatgtgacccaaaatacttgtaaatatgtttatggatgaaaggatactacgacgagaacgtccaagcttaattcgatgattcactaatacgctgaaatataaatttactaggtaaaagcttttatcaatatcaatggaacatggaagaaaataacaaatactattcatattcagagaaacgtacccactaatacacctatattgtgtctacatggacatgttcaatacaagtaaatgtccgtgtgatttgataacgacagtgagtctagtacttgtgggggcaggcaggccataggcagctgaggcccaaggcccaatcgcctcctgcagcatggcttgccgtatttaattaataacatgcaaatctttcccaggaattaatctgtttcagccaaggattagcgctagataatatgggttcatcgctgtgaagcctgggcatccgcccctgctgcccgggaggtgaatccgcctctgggtccaattacgttgttactaatacccgttctaacttgctgttcttgtggttgtcatgtgtattcttcatcaaaatttcaatactgaacaaagcagctatcagtattggaaaactaggtagtctagtccccaagtatctacttcaagctagaaaagttcagcccaagaacataacagaaattggaaataatactaataactcaaattaatctaatactctctttatcaacttatggagcatgaaggaaaacaagaaacaaaaaaacttgatctcaggtgctcgatagactagatattttttgtgtgtattctacacccttcattgctcgtaaccattcttagtaacaatttccagcactggcatcttccaacagcacctcgatggttttgaaactttgatctcccaacttgatgttaacattgtctgccccaacttgatgtagcaccaaaatcttgcaaccaacatcaactggacaatgcaccacatgctcctcacctaggattgcaatttcggatcgaaattttggtaattccggacccccccccacgcggcaagtgattatatcggccgttttttttttgtttttctcaaatttctgtgaatttggtcaaaatttaatcaaattcagttaaattatgctaaaatttaaaaaaaaatcggtccaaaaagtgccaaaaatcctgattttcaggaatttcggtagaaccaaaatgagcgaaatttcggatgaaatcaaaattgaaaaccctgtcctcaaccaccttatgtcaagtattcccgtgctcactcacctagatccatcattatttgtttaaccatgcctcatgaatccacataatttcagtaaaaagtgagcaaacttgaatacaattaaacccattgtcaattacatgtcacatcaacttgttgatatgagtatcatctaacgtaatcttacaattttgttcggaatgtatggttataatgatcccaagaaatagatcatctaactgtaatgatatgtatgcagatggttccgtagtgtttgtgggatcctatgatatgtactaggatattgacatcccatagtgaccactatattccctttcttttgttttatttcggggtgggtgtccctgaaaatttgaactctctctacctgtaatgcagttgcttcaagttgaaagcgagctatggcaaagcatcttttatggcaaggaatgccccatcattttgtgaaatctggtttgtttggagaggaagacacatttggaccagagaagcagctgcagccattggcaacaatatctcagtttacaatgaagatgatgttatgatcaggaaaagaatcaggttcagctctactagtaacaatgctgaatccatacttgatgaaggatacatttcatacgaggcacaaacacctgctgatcgttatgaaatcaccatttcagataatggtcaaccgaatgattatgaatctcttgttgatgccaaccatttctgcaatattattgtaccaaatttgcaaaatgcacagtctgcatttaactcaacattccagcctggttcttctgtagacatggaatcattagtgttatatcctcaggtgctctcctgctacattgacatgttcattgataattttgtaattaaaggatgatcctttttttcaatttaaatactgatggtattatctgtcaggaaatcttggataaaaatttcaagcaggtcattctagaagcagagagatcaaggaaggatgcttttgttgagcttctcaagcgcaaagatacagagtcaagagtagccggtgttattgccagggtatgcaaaccacttatcctatcttgtattttaaactgcacggttcctctgcagtataacattattgggaaaccaaacggaagttttagattctttaacattgattttgaataatgtggtgaaaattacatatgcattcctttgttgatctggcttgtgcttcttgagcaggcaaaagcttctgagttcgctcaaaaacaagaaatgaaaatgcgggaggaacttgaagctttgttgacagccacaaaaaagcagcatgaagatcttgcagaaaataaagaaaaggctacagaagggttggactcttcgatgagaaaactagccatcctagatgcacgtgctaaaagcatagcttttcggatgaatgaagctgtggcagagctgaaattgattcaatcttccataggaacactcaatcaggaaattcccaaaagagagaagctagaacttgtacatactgaccaggttgaaaggtgtgcatataaccacattatgttaccaaattgcagttcaactgtttgtgctgatgacttgtacaactttagagaattgactttgtcagatattaaagctgcaacatgcaagttctcagacagcttaaaagtactgccacgaggtcttggatgtgtttataaaggagagattatgaacagaagtgtaatgatttataagttgcactcgtgtatcattcagagttcgatgcagttccagcaagaggtactctctgttaccctgtttatcatgctggttgatatattagtgatacatagctcaatgaaactgctaaaagttattttgcagctccacatatcacttgaaactctatggggcttgttgaattatgtaggatttgttttttttcttctatttatctagatagattacttgttgtgtcatttgtcataataaaaaccaaaaattatctctttgcactatgaccaagcaggagatgatgtgggccaatcattccaagtatatgcttgcttgtcttgtttatcacataacttatcgtgctaagtgtttataaaaacctaggagcatatagcaatagcagttatttagcagaaggtagttatttcacattgtttttggcaggtccacctcattagcaaggtgaggcaccctcacctggtgactttgattggggcatgcccggatgcattgtgtcttgtctatgaatacgtgccaaacgggagccttcacgaccgcctttggagcaagtgcggcattcctcagttgccatggaaaatccgtgcacgtattgttgctgaaatctcaagtgctctattcttcttgcattcctgtaaacctcagatgattgtccacggtgacttgaagcttgaaaacatccttttagatgccaacctgcactgcaagatagctgattgtggtatttctcaattattcatggaagatgccaaggacgcagacccggaataccggagaagcaaaccattgacacccaaatctgacatatactcctttgggattgtgatactccagttactaactgggaagcaggctgcaggccttcccagcgaagtaaggcgtgcaatgtccagtggaaagctatggtcattgttagatccaacagctggagagtggcctctggaggtggctcgaaggttagcagagttggggctcaagtgcagtgaggcagcaagtccagagctgctgactccagaaactgtgcgagatctggaacagctccacctgatgagggataatagacaagtgccctccttcttcctgtgcccgatcctcaaggcaagaacgaaacctaagaacatcgatagggcagaagcccataagtaacccaaaatatctactaataataatgcggtagtaatgtgttttttttttcattctaatttgtgcaggaagtgatgcatgatccccaggtgggggcggacgggttgacgtacgaagggcgcgccatttccgagttgatggacaatggccctccaatcacccccaaccacgcccttcgttttgccatccatgactggctctctcagagatcaactcctttctgattttccccaaggatctggattttgtatgtacacattgtttatttcatagtcagtctgtttgttagtagcacatgcatgatgtaacgaaataataatagagtaaatatttcaagtttcatgtatcgagcaaatgtcactgtacatatagagtgagttaggagctatgttcagggcagtcggagtatcttgctagttgcccgtttggtctaagtagcagttgtcatggggttgacaaactaccccctccgtttctttacttatgtaagatgctttgatttttttatcagttaaagttcaatcaaatttatagaaaacatagttacatttttaac</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0100500, RefSeq:Os10g0100500