Os10g0105900

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Revision as of 08:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0105900| Description = The start codon is not identified.| Version = NM_001189074.1 GI:297727278 GeneID:9269058| Length = 2586 bp| Definit...")
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Gene Name

Os10g0105900

Description

The start codon is not identified.

Version

NM_001189074.1 GI:297727278 GeneID:9269058

Length

2586 bp

Definition

Oryza sativa Japonica Group Os10g0105900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:414438..417023

Sequence Coding Region

414654..415649,416654..417022

Expression

GEO Profiles:Os10g0105900

Genome Context

<gbrowseImage1> name=NC_008403:414438..417023 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:414438..417023 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aagaccgtgtccgacatggacgaccaccctggccatctcgtctacatccccttgctcgagttcttccgctgccgctgctgccacaacagcagcagcagggcggtgcctccggcgagggccgtcaaggcggccctagctgaggctctcgtgtggtactatccggttgccggccggctgcgggagatcgccggaggtaagctggtggtggactgcacggcggaaggggtggcattcgtcgaggccgacgccgacgtgcggctagaggagctcggcgagccgttgctgccgccgttcccgtgcgtggaggtgctgttgtgcgatgccggcgacattggcgttgtcgttggcaagccaatcgtcttcctgcaggtgacagagttcaagtgcggaggatttgtgatggggttctacataagccactgcatcgccgacgggttcggcatgatccaattcatcaaagccatcgtcgacatcgcgcgaggcgagcaagctccaatggtgctccccgtctgggagagacacatcctcacatcccgatcaccaccacctaccattggagctaccaataccaataccgtcaagttcagctcagtcctcaaggactccacctccattgacgatgacatcatgctctccacgccccaagaatccatggtcggcaactacttcctctttcgtcccaaccacatctccgccctgcgaagccatgtccacgaacacggggcgacgacggcgacgaggtttgagctgatcaccgcggtgatctggcggtgccgcacggtggcgctcggctacaagaccgaccaccgcgtccacttgctgttcgccgccaactcgcgccgccaccgcggggacggcacgctccgcatcccggaggggtactacggcaacgccctcacctaccacgtcgccgccgccaccgccggcgagctgtgcggcaccacgctggctcgcacggtggcgctgatacgcgaggcgaagctggacggcacgacggaggagcgcgtgaggtccaccgtcgccttcctggcgtcgctgcgcctgcgccgcagcggcggccggttcccggcgctggcgttcgacaaggcgtacgcggtgtccgacttcacgaggctcggcgaggacgggctggatttcgggtgggcggagcgcgtgggcggcggcgtggccacgccgtcgttcgtgagcttccacagcaggtggaagctggtgagctctgacggcgatggcgaggaagaagaagctgttgctgcgttgatgctgctgccgaagccggccatggataggttcgacaaggagttggcattatggttggacttggacaagccatcagttggaggcctctgcctctccagcaaattttga</cdnaseq>

Protein Sequence

<aaseq>KTVSDMDDHPGHLVYIPLLEFFRCRCCHNSSSRAVPPARAVKAA LAEALVWYYPVAGRLREIAGGKLVVDCTAEGVAFVEADADVRLEELGEPLLPPFPCVE VLLCDAGDIGVVVGKPIVFLQVTEFKCGGFVMGFYISHCIADGFGMIQFIKAIVDIAR GEQAPMVLPVWERHILTSRSPPPTIGATNTNTVKFSSVLKDSTSIDDDIMLSTPQESM VGNYFLFRPNHISALRSHVHEHGATTATRFELITAVIWRCRTVALGYKTDHRVHLLFA ANSRRHRGDGTLRIPEGYYGNALTYHVAAATAGELCGTTLARTVALIREAKLDGTTEE RVRSTVAFLASLRLRRSGGRFPALAFDKAYAVSDFTRLGEDGLDFGWAERVGGGVATP SFVSFHSRWKLVSSDGDGEEEEAVAALMLLPKPAMDRFDKELALWLDLDKPSVGGLCL SSKF</aaseq>

Gene Sequence

<dnaseqindica>1375..2370#2..370#gaagaccgtgtccgacatggacgaccaccctggccatctcgtctacatccccttgctcgagttcttccgctgccgctgctgccacaacagcagcagcagggcggtgcctccggcgagggccgtcaaggcggccctagctgaggctctcgtgtggtactatccggttgccggccggctgcgggagatcgccggaggtaagctggtggtggactgcacggcggaaggggtggcattcgtcgaggccgacgccgacgtgcggctagaggagctcggcgagccgttgctgccgccgttcccgtgcgtggaggtgctgttgtgcgatgccggcgacattggcgttgtcgttggcaagccaatcgtcttcctgcaggtataataatgaaaatataaggcagacaaccaacggtatatatatatatgagcaattctaccatccaacatttggtacctcaaggtaccatattttggagttaaatttaaaaatatattgttcatttgatttttttttctcacgaatatttgagatgtaaaattttttatagaaatataccgtcggtctcgcacaaccgttacacgaaagtgatgtaggaatgacgtcgcaagcagtatcgtacggggaaacgcgagaccgagcgactcgcgaattggaatagcgagaccgagcggattgaaagtgaagtctcgcggtctcgctcgttgcatgagcgagattagcggtttatcctaattattatttgttaattgttaattaagtaattaatcgctaatcaaattgagcagttggacattgtcgctgttcgattttgcgagaccgttcggtctcgctcatccattccgtgagaccgtgcggtctcacgctttttctacgggataccacccgcaacgttattttcatgtcactttcgcgtaatggttgagcgaaaccgaccgtatatttctataaaaaattttgcatcccgaatattactgagaaaaaaatgattagtatatttttaaatttaattcccatattttgtacagaaaattttggtatctcgagataccaaattttacactacaaagtctcttgaggcatcaaaattagtgatacctcaggatggtaaaattgctcataatatacccatgcatgtgtcgccacctaatcaaagcgtacactgggggatcgtagatcgggaccgttttaacacaaaagtttcaccgacagaggatgacggcagaaaaaaaatctatgccaccatcgctaccaacgtttaaagtagtataattagtggttttaaattttacaattaaaaatgggagaaccaaaattttagaaatttgaaacaagctagattgctataggaatatgaactaaattgctatgtatacatgtaggtgacagagttcaagtgcggaggatttgtgatggggttctacataagccactgcatcgccgacgggttcggcatgatccaattcatcaaagccatcgtcgacatcgcgcgaggcgagcaagctccaatggtgctccccgtctgggagagacacatcctcacatcccgatcaccaccacctaccattggagctaccaataccaataccgtcaagttcagctcagtcctcaaggactccacctccattgacgatgacatcatgctctccacgccccaagaatccatggtcggcaactacttcctctttcgtcccaaccacatctccgccctgcgaagccatgtccacgaacacggggcgacgacggcgacgaggtttgagctgatcaccgcggtgatctggcggtgccgcacggtggcgctcggctacaagaccgaccaccgcgtccacttgctgttcgccgccaactcgcgccgccaccgcggggacggcacgctccgcatcccggaggggtactacggcaacgccctcacctaccacgtcgccgccgccaccgccggcgagctgtgcggcaccacgctggctcgcacggtggcgctgatacgcgaggcgaagctggacggcacgacggaggagcgcgtgaggtccaccgtcgccttcctggcgtcgctgcgcctgcgccgcagcggcggccggttcccggcgctggcgttcgacaaggcgtacgcggtgtccgacttcacgaggctcggcgaggacgggctggatttcgggtgggcggagcgcgtgggcggcggcgtggccacgccgtcgttcgtgagcttccacagcaggtggaagctggtgagctctgacggcgatggcgaggaagaagaagctgttgctgcgttgatgctgctgccgaagccggccatggataggttcgacaaggagttggcattatggttggacttggacaagccatcagttggaggcctctgcctctccagcaaattttgatataaaagcgccgcaattaaaaaaaaagaagcaagtgttgattcttctccatgcacttcaccttgcttgagttcaatcaaaagcttcattttgtattgaaaaaaataaaatattcgttttgagatataccggcacagtttactgtgtgtgtagtatatgtaaaatcatgatgatgattaatttgtaacgaattataccctggctgattttaacttt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0105900, RefSeq:Os10g0105900