Os10g0113900

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Revision as of 08:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0113900| Description = Similar to NADPH-dependent codeinone reductase (EC 1.1.1.247)| Version = NM_001070580.1 GI:115480903 GeneID:4347980| ...")
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Gene Name

Os10g0113900

Description

Similar to NADPH-dependent codeinone reductase (EC 1.1.1.247)

Version

NM_001070580.1 GI:115480903 GeneID:4347980

Length

5337 bp

Definition

Oryza sativa Japonica Group Os10g0113900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:890583..895919

Sequence Coding Region

890631..890941,892146..892395,894956..895135,895418..895669

Expression

GEO Profiles:Os10g0113900

Genome Context

<gbrowseImage1> name=NC_008403:890583..895919 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:890583..895919 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgccggaggcggctctgagctccggcaagccgatgccgcgggtcggcatgggcacggcttcgttcccgctcggcgcgaccgacccgtcgacggtgaaggatgtcgtcctgcgcgccatcgaggccggctaccggcacttcgacacggcggccgtgtaccagacggaggccatcctcggcgacgccgtggcggaggcggtgcgcgccggcctcgtcgcgtcgcgggacgagctctacatcacgtccaagctatgggttgcccacgcgcaccccggccatgtcctgccatctcttaggcgtgcgctccggaagatgcagatggagtatctcgatctgtacctgattcactttccggtgagcatgaggttggctgaagatccggagtcaatgacatattccaaggatgaccttgtgatgatggacatggagggagtgtggaaggagatggaggagtgccaaaggctaggactcaccaaggctattggtgttagcaacttcagttgcaagaagctcgagacattgctctccttcgcaaccatctctcctgcagcaaatcaagttgaggtgcacccctactgtcggcaaaataaattgagggagttctgcaaggagaaaggaattcagctctgtgcctactctcctttaggtggaaagggtacaccatggagcaacaatgctgtcatggattgtcctcttctcaaacagattgccatggagaggggtaaaactattgcccaggtatgcttgaggtgggtgtatgagcaaggagattgtgtaatcgtcaagagcttcaacaagagcaggttaagagagaatctaggcatctttgattgggagctcaccaatgatgatcgtcacaagataagcaccctcccagagtggaggggaactcttgacatcttcgtccacaaaaccggtccatataaaacagttgatgagttttgggacggcgagattactggtgacaagactttttctaatggtccctga</cdnaseq>

Protein Sequence

<aaseq>MMPEAALSSGKPMPRVGMGTASFPLGATDPSTVKDVVLRAIEAG YRHFDTAAVYQTEAILGDAVAEAVRAGLVASRDELYITSKLWVAHAHPGHVLPSLRRA LRKMQMEYLDLYLIHFPVSMRLAEDPESMTYSKDDLVMMDMEGVWKEMEECQRLGLTK AIGVSNFSCKKLETLLSFATISPAANQVEVHPYCRQNKLREFCKEKGIQLCAYSPLGG KGTPWSNNAVMDCPLLKQIAMERGKTIAQVCLRWVYEQGDCVIVKSFNKSRLRENLGI FDWELTNDDRHKISTLPEWRGTLDIFVHKTGPYKTVDEFWDGEITGDKTFSNGP</aaseq>

Gene Sequence

<dnaseqindica>49..359#1564..1813#4374..4553#4836..5087#atcttcaatttctctcgatcggttcgatcccatgaccatgtgagggggatgatgccggaggcggctctgagctccggcaagccgatgccgcgggtcggcatgggcacggcttcgttcccgctcggcgcgaccgacccgtcgacggtgaaggatgtcgtcctgcgcgccatcgaggccggctaccggcacttcgacacggcggccgtgtaccagacggaggccatcctcggcgacgccgtggcggaggcggtgcgcgccggcctcgtcgcgtcgcgggacgagctctacatcacgtccaagctatgggttgcccacgcgcaccccggccatgtcctgccatctcttaggcgtgcgctccggtgagtataactgcaacttattttgttggactagctatatatgctcatgcgttgcaccgggatcattaattattcgtgtcattcttcatgtccagctgcgtagctactctaaccagtcgatataaattttctatatacctagctagaatattatatttgatccatgtagtataatctgagacccgtcaagaaattctaatagctagccgcctagaaatacgaaaagacaaatagtaaaaaataaaaatgaaataggctagaaactagcctactagcagcaggttgtgggagggaggcatggaaatgggtgagtggtttcacatgacagcggcggtggtggccaggatgctaactggtgcatgggcactagtatcttttttcgtttttcttttttccatctttttcgtttttctttttttcgcttcctctcccctcacgtgttttccttcttttttttcatgtttttttttcgaatttttaatcggtagcacacgtgttaccaaaaaattttttggtcaaaagttttcaaatcttaacttaaaaatttttcaatataaaaaaatttaaatcttgagttgaaagtttttaaatctgggttgaaagtttcaatttttaagttgaaagttttcaaatctgcgttaaaagtctcaaatttgagttgaaaatttttcaaatttgagactacaagttgaaagtttttaaaatttgacttaaaaaatttaaattagagttgaaagttttaagtttttaaatctggattgaaaaagttttcaaaagttaactttacgtatagttttctttttaatctattagtaaaagaagatcattaaatataaaaaaaattaattatggttattatctacaactaaccaaagtaaacatctccggtaaaaaaggaaagtcccgcaaaaaaggaaaaaggaaatactaaccgttatcattattggaggctggcgctaatcgcaccatcctaattggattaggccaattagctaccgataaatcagcacttgcgtgcatgccccggtgaccatctcggcatctgcgccaattagcaaaaccggcggtggtggtaggatggcggaaccatcaccatcattgttgtctttcttttttaactaaccaacattaaaaaaaatagagggtgcatatatgatcaagcatttggcttgtgtggttgatttgatttgtacgaatattgtaggaagatgcagatggagtatctcgatctgtacctgattcactttccggtgagcatgaggttggctgaagatccggagtcaatgacatattccaaggatgaccttgtgatgatggacatggagggagtgtggaaggagatggaggagtgccaaaggctaggactcaccaaggctattggtgttagcaacttcagttgcaagaagctcgagacattgctctccttcgcaaccatctctcctgcagcaaatcaagtaaaagttccaaacattcctatacattataataatcttgactcttttggaattgcatctatatatataccatcaactagagaaaaacccattagcattatttagtgggataacaatattaaaaaatgaaaaaaaaaagtgtccacatcggcgattccggtcaagcttcacgatcagctagagcccacgtaactgtcaaactcagccataatgtccaatcaagcctcgccctctcacctccgttgcatatatgtctcagtactaagaaacgtttctaggaagatatcattttttttctccggcagccaagaaaaaatacacctgcaaaaataattgacactgtctcaggtcataaatcacctacgaaaacctactttttacagacgggtatctaagaaatccatctagctatgaaggtaagtctatttttacattcagatacctgtgaaatcagtctttaaaaatcgatatttagcggatggttgtaagtaagaaaaccatcataaaatatgggaataccactaaaatatgaaaaaaaaattgcaactacatataaagtcggatgacgacaaacttaatatgaaaattgtatctctcaatgagatgtacaacttttgtgttgatagtctttttatttgagatcatttataatttcaaatatgaaaaaaaagtaactctttcaaatgaagttagatgatggcaaactctatatgagaattgtagaccttgacgaaatcaacaactttgcagttgaaagttcgtttatttcagattgttgaggtgtgttcaaatattcatttttcattctcagatatattttagaaattgtttgttttagttttcaaatgacttcggatggagaaatgttctaccaggaaattgtagatcccaatgagatctacaactttatagttgaaagtttttatatatgagatcgtttaggtgcctaatattcattacaagctttgatatctatttttacaaggaaaaagtccatataccccctaaactttagatgaaattccatctagcaccttgaactttaaaaccggatatccaacccttaaactttacaatactattcatgtaacccatatggtggttttacaaaatgattactacataatttgcatattcgatggatgattttgaatatgtgacatatgccttggacatatatgttaaatctccacttgaataaatgaataccaatataatactaatatgatgttactatatactataatttaagaccgatgattgaggtatgtaagtatgttatacgagtttttttaaatcgctcgtttaaactttaaaatatgcaaaaccactgtctgaaactaatttaggggtaacatgaattgtattgcaaagttcggggtggatgatgtccgactgtaaagtttagggtgttatatggatttttattcaacgtttagggggttatatgaactttttcctttttacgagggttagaaagtccaaacttaaaaacaattctagatatttattttaaacctgattgaggtaaaccaaagttatacgatattctattagtgttttctgtaatatgacaatattaatactttcatggaatacttttttgtgtctgatcattcattaatgtcaagatgcataacatatatatcaactcatataaagaccacggcagtgagcaaccatattaaaataaatattttaagtaaatatggacccaaccatatgaagaaaaatattacaaggatcatggagaaccgtggttcacctcaatcggacataaagtgatttttctataacattttgaagtttagtcatttttgtgggttttttatgtctataaaaattaaactggaattttattttcatgggtgggtccttgagagagccacaccgtgaaaattgatttctgcacgggttggaatttgcctacacaaatccatgatttctataggccctagcttggttgcaggcaagttggaaaaatgcccacgtaaatcacttatggatcatcttaacaaatactccctccatattttaatgtatgacgccgttgactttttgactaacgtttgatcattcgttttattcaaaaattttgtgcaaatatgaaaatatttatgtcatgcttaaagaacatttgatgatgaatcaagtcacaataaaataaataataattacataatttttttaataaaacgaatagttaaacgttggataaaaagtcaacggcttcatacattaaaatatggaggtagtatttttttaagtagttactcgtcatggccatgcacagatgagagagacaaggacataaaagattaagaggggttgtaagaagaaaaagggaaatggtattttagttttttttttgcgaggaaaaaggaaaaatggtattttagttatgagtatggagacaacattttcttagtactacttggtactgtttatattatagttgtacatatacatttttttctctattctctttgtccaaaacatttcaacatgtacattgattaatttattaatattgttcacgggattacatgaacacttgcaggttgaggtgcacccctactgtcggcaaaataaattgagggagttctgcaaggagaaaggaattcagctctgtgcctactctcctttaggtggaaagggtacaccatggagcaacaatgctgtcatggattgtcctcttctcaaacagattgccatggagaggggtaaaactattgcccaggtaaacagaacactgcaatatatgtcaattttttatatgtgctatgataaattaagcttccagctatgcaattatatttagagaccgtagcaggaaaaacaaaaggcaaaagtggtttgtttaatggccgataagatgatacatgaaacttatggtaataattgttctggtgaatactatatatacctatgttgcattgtttagtgaatcttatcgtgcatatcatgtttattaactagatatgaaactatttagaactgaaagtacaaactggaagtgtaggtatgcttgaggtgggtgtatgagcaaggagattgtgtaatcgtcaagagcttcaacaagagcaggttaagagagaatctaggcatctttgattgggagctcaccaatgatgatcgtcacaagataagcaccctcccagagtggaggggaactcttgacatcttcgtccacaaaaccggtccatataaaacagttgatgagttttgggacggcgagattactggtgacaagactttttctaatggtccctgatcaatgctagcccagccaatgaatggactgctcaagaagaattcaaatttcgtgtaccagagtccaacatacttttcctcatgatgcacacatgttatgtccttttgtgaatgaaagtatactagtcgtcaaaatctccaatcttgtccacatcatagagatcgttttaaatctaggaacgttattttcttattttccatcagataagactaataaccaacgcaagcctgatctgaccacgtgttgtacc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0113900, RefSeq:Os10g0113900