Os10g0122500

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Revision as of 08:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0122500| Description = Transferase family protein| Version = NM_001070602.2 GI:297610045 GeneID:4348004| Length = 12423 bp| Definition = O...")
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Gene Name

Os10g0122500

Description

Transferase family protein

Version

NM_001070602.2 GI:297610045 GeneID:4348004

Length

12423 bp

Definition

Oryza sativa Japonica Group Os10g0122500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:1411897..1424319

Sequence Coding Region

1411897..1412043,1419828..1419875,1420553..1420681,1423012..1424319

Expression

GEO Profiles:Os10g0122500

Genome Context

<gbrowseImage1> name=NC_008403:1411897..1424319 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:1411897..1424319 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccataaaacccgcccgtcatagtctggcccaggcacggcccggtcgacattacgtgccgagctgtgccggcccatgtgctgcacctccgcccaggcacggcccaccagcagtcgggccgtgccgtgccggcccgaaggcacgggcaatcaggggtggcttctcgaagcaccaggagggtattggaaagaggttcaagacaaaagctcaaaaacaaggtgaggagattgagaacctaaagaaggcaataatagatactcagaaggcagcagcagatactcaaaacctcattcgagagatgatagcatttgaacagactcagctcgcagagagttgcaggctaaagcatagagaatcgagaatgtgcatcgtggtgaccaagtcgccgccggagatcgtccggccatcggagccggtgacgacgacggcggcgaccggcaagatcattttctcgcctttcgacaagcctcttgccaccgtaccggtggtagtgttgcaggtgttcgagcatccgatccatgagcccgtggagaccatcaggaggggcctctcccatgcactggtccactactaccctctcgccggccgcctcgccggtgacgattacgacgacgtgcacatcgactgcaccggcgaaggcgtgaccatcgtcgccgcgtctgccaactgcaccgtcaagcagctcatgcgcgacatcgacggccgattacctgacccctcaacggcggttcaacgggagctcatcgtggacgacaacccggcctacggcttcggccgcgctgaccctctcattctgatgcaggtcaccaccttcacctgcggtggcttcgtcatcggggtgacatggaaccatggcgcggctgacggtttcgggatcgcgcagttcctgcaagccgtcggtgagctcgcccgcgggctgccgaccacgtccgtcataccagtcaggtcggacaagtcgttacaggccatgtcttcttccaccgtcatggccgccaagcaattcatgttcggcgtcaagccgacgacgctcgccctgcacagcatcaccatccctgcgagggtgatcaacggcgtccgaggtccgactccgacgtgcaccgtgttcgaggcggtggcggccgtgatgtggcgctgccgcacccgcgtggtgatgtccgaccccgacgcccccaccgtgctcgccatcacggtgaactctcgcaagtacgtgggcgtcaaggacgggtactacggcaactgcgccaccatgcagatggccgtggcgaggagcggcgtggtggcggacggcgatatgatggaggtggtgaggacgataaggcgcgctaaggaggagataccggagcggttgaagaagggagacgccatcgccgagctcagcaaggggcagctgagtgggtacgagagcgtgctgctggtgacgtgctggcgaaacatcggcttcgaggcggtggatttcggcggcgggaggacggcgagggtgatgacgacgtacgagcagagtggggtgcggccgctgtgcgtggtttgtctgccatggcaaggggaggaagatgaaggagccagggtgctgtccggctgtgtaacgcctcaccatgccgatgcttttctccgtgaaatagctacgctctga</cdnaseq>

Protein Sequence

<aaseq>MAIKPARHSLAQARPGRHYVPSCAGPCAAPPPRHGPPAVGPCRA GPKARAIRGGFSKHQEGIGKRFKTKAQKQGEEIENLKKAIIDTQKAAADTQNLIREMI AFEQTQLAESCRLKHRESRMCIVVTKSPPEIVRPSEPVTTTAATGKIIFSPFDKPLAT VPVVVLQVFEHPIHEPVETIRRGLSHALVHYYPLAGRLAGDDYDDVHIDCTGEGVTIV AASANCTVKQLMRDIDGRLPDPSTAVQRELIVDDNPAYGFGRADPLILMQVTTFTCGG FVIGVTWNHGAADGFGIAQFLQAVGELARGLPTTSVIPVRSDKSLQAMSSSTVMAAKQ FMFGVKPTTLALHSITIPARVINGVRGPTPTCTVFEAVAAVMWRCRTRVVMSDPDAPT VLAITVNSRKYVGVKDGYYGNCATMQMAVARSGVVADGDMMEVVRTIRRAKEEIPERL KKGDAIAELSKGQLSGYESVLLVTCWRNIGFEAVDFGGGRTARVMTTYEQSGVRPLCV VCLPWQGEEDEGARVLSGCVTPHHADAFLREIATL</aaseq>

Gene Sequence

<dnaseqindica>1..147#7932..7979#8657..8785#11116..12423#atggccataaaacccgcccgtcatagtctggcccaggcacggcccggtcgacattacgtgccgagctgtgccggcccatgtgctgcacctccgcccaggcacggcccaccagcagtcgggccgtgccgtgccggcccgaaggcacgggtggtctatcgtgccctattttaaataagtctatttccctccctcctctttgggatgacatatatatatatatatacatatagagagagcgctaaataagtctattttacgtccctattctttggaacgtgacatataatgtgtctatttttactccctattccttgtgtgccgggcctggcttgccggcccaacgtatcggtggggaagcccagacacggcccggtggtcgggccgggccagcacgggcccgacccctatcgggccgtgccgtgtttgggccggaccaaaatatcgtgccgtgggatgggccttatggccatctatgcccttaggatctaaaatattgtagctgacaaggaactccatgagaggtacatcgacgagtttatacagcagcttgtttctcacgtcgcggatagcagctgcaacactgctgcccgagttccttccagttctagctgagactatattttgtctctgttactgtaattgatgttatcgtaatggctacgcgcatcacatgttgatgtaaagaaggcgtggggttactctaccctttacatcgctcgatcttccttgtccccatgtattgtttactccaataattattaatggttcaagtttcagccagattgaactgtttattttcttttgaaccctgcgcaaagtcgcccctgcaatggcagctcgtgggcgaaaacctagccaccgcagacccgctccacccaatcccccgtctttgcgctgctggccaaccacgcagcgagccgagatgatggtggtgaggccgggtggtggtaggggagagatctggtggagttccgacacaaatctcaaatcaaataatagtttagaatttgtaggattgtagagaatgttttctgtcaaatgtcaagtacacagtaaaaaaacaaaccttctttttctgtcttacaaaattatgcaaaattcattttctttatcactagtgaagaaacccttttctaggtgcctcataacctatttatattggtatttctcgacccgtattagataagggtgtacaaataatgacaaaattttgtatgtatccatgagttttcactgaattttatctcattctctacccctccgagcactattttggacggttttgggctaggctggataacatgacattccagtgtggcaaaaagaaattttaaaaaataatgggccaccaatcagtgctccatatctcctcccatattctcttctacttccttcccatccatttctatctctacccttgaaacaaagcagggtggcagcgatagcggaggaggggatcgagcttatcagtgaggagctctctctctctctctctttggtggaggcggctataagctcaggtccgatgtgttgggaggaggcacctgaaggctcaggctagttgcggtggtcgacagtcaaagcggtcgaagaagtctagggtggtggtggagactggtgtcacgcccagaaatttagcccaaattttcaaactattctgtgtattaaatccctgtccaggaccagccagggcatacaaaacgacaaattaatatgcagatccaaatgtaaataaagcgtaaatacttacagaaaaggcacttagtcctcacaccgaaaagaaagtaacagtagtggaaaaggcgatcctagcggggcttcagctccactccgcaggcaaaactcaattggggtctgagccttggtcctctaacttcttcattagttcagaagcactacatttttgaaaaggaggaacaatagcaagactgagtacaaccaccgtactcaacaagccacaccaacgatgcagacgtgcaagagaatataaggatggtttgtggctatttgcataaaggcagttgtaaaacattttattgagcaaaaaagtaaaactgttgattaattaaggtagcattaaatctccactgatcaacgctacaccacgttgaataggcccaaccaacccacctgaactacagtgcatttagtcgatttattaagtgtgagactaatcacagtgaatctggtcgatcgcccataactgcgggcacggctattcgaatagttttactctggccagtggtgcacaactgtacccagaagacacaatccaccggcatgtcaccgcgtcatcatgcacccatgatgaacacgtcaccatgtcgagtgattgtgacaagacccttcatataacccctctgaccaatcgcaccacacctcaggtttcacccccactcctcacaggcagcgggcaatcccccctcatgcctaggtgaatccggaagcgacaaaggccgtcgcaggacccatcccgctccatcacgcccacccttgcctggatgcgtcagccagagaaaaactatacttcaagtcaggcagttacccattccctcttgtggcaagcgctgtaagtcttctagtgcatcccgcgaaccggtccttaattgccataggtgcgaccagtaaaaccatgcactcatggcccaccattcagtcacattttagttggatgattacgaccaatgaaacatggtctggtgtcatgagcatgtagctcgttctgatactaaaaaggtgtaatactgcaattatcccatcgactgagctagtgggaattaagcatggctaagcatatagttctagctaggtcatcataagtaacacaagctaggcgatttattacccacggttgacaaaggacagatatcaagtaatatggcataagcgagcagataggtaatacccggatcccatgtaattaggaaaacatgcatatttatttgcaaacggtaaaacatttgtaaagtaggatcaaaatgctcaagaggagtggatgacttgcctttcttcttcaaacgatcttttgaactcttttcttcgcgaccgcggacttccgaaacgatggaaactacacgctggcacgcaaaacgaggaaaaactctaataaaaaccaaggaaacagtacataaaaagtaaacaaacatgtagatctcaattttagatgaattttgcaagttgaatggcccaattttgagccattaaatgaatttataaaattattaaccgaaattattgcgcaattaaactgatttatgatgtcacaagggggaaggggtggcgccgacaagcgggccccacctgtcggtggctgaagggaggcaggtgcatggtggaccgggtccacgcgtgcacttgtccgcgggcgcactacgtggcagccacatggcggccacggcggacggggagggcgaggtggcgccgacgtggcgccacgagggcaccttcgtggggcaacacgtggacgacccagatcggccagagcagccgatcgggcggccacgggcaagtgcggcacggcaaggggccaggtggccaggggcgagcagggcagcggcagccggccagaaggcggcggcgctcagccatatggtcgccggtggtgggcggcggcgacacacacgggaggcggcgtggaagggagagggggctcaccaagaggacggggatggtgaggcaaagacgggaaggcgactgacgacgaggattggcggcggcgtttctcgggttggggtcggggacggcgcttcggcgactcccgaccgcggcagaggtgcggccgagggccagcgggacctggggagctaagaggaggggttagaggagggataggcgtcgcggcacggcgaggaacaccggtgagcacggcgtttgcggcgggactcaccggtgagcgaggggagacggttacggtggctcccggcggcggaagacggcgttcaggcgtcggccagggaagaacgtgacacggcgaagccggcgtgtcgcgacggtggccgaggcagcacggacggtggcggctcaggttggcagtggagagggcggcttggtggccgattggaggaacgaggcggtggccggtgcttggcttggagcgctgaagccgacagtggcggtggcgcggcatggtggtggttagggcggcggtggtggccggctgaagtcggcaatgtggtggtggagctcaggttggtggtgggagcagcttttcgggggtggaaaaggaaaacggagtggaggccggggtggagctcagcggggcgaagccgagggtggtggcggcgcggcccggcggtggctagggcggcggcagcgcacgaccgagggtcgccggcgaacggtggcgatgggtagcggcgcgggtgggtggttttggggcacgggagggctcgggaaaatggggaaaaagggagagcaaggtgcggggagtcttttataggctcggaaaggcgggatcgagcacgggggaggcggcaaccggcgatggagtggggcgccggcgacgcggggtggtggcgacggttcggcgccggttcttgcgggggaagtaggggaggaggtgggggacatggagggggtcgtgcctatgccaggcgggagcgcgcggggtggaggaggtgggcgggggaagcggcttcgtggggtggctcgggcggccatggcggttgccggcccaggctggaggaaggggatgacaggtgggaccggcgagagggagaggggaggccggttgagggagaggaaatagactttggggggaaagggggctgagcgggctgagggaggggaggacttgggccgagcccgaaaggaaggaagtggaatttatttgcttttgtttttatttaaatttattgaatgttctttgtgtgtttataaatacttcttgagctccgaaaatttacaaaaaaatccggtgagtaaattaaggcataaagaatattacaaaatattcccggccaatgatttttaaaggaaatttttaatcccctcaataattcagttgattaaattgatttaacttttatttaatttctagaaaatatattatttaatgatttttaatcccgaacgaaaatcggggcgttacaactggtccctcagggcgccggtggtggagcgtggtcgataggagaatcccaggttagcagcggcctcatatccaaaggaaaggcgaaggcaatcaggccatgtctgtgccggcatgggaggaggtcaagccacgtgccaacatgggatgaagcggagcactggttgctatagggcctgtttggagaagcttaatattctgagaagcaggtgctgagaagttagctggtgagaatctggagaagctgtgaaacccagcttctggcttctagttcattttccagattctacaactacagtttctcagaatctggataaaaagttggattgtttgggggagcttctggaccttctgggccatagtccagaagctctcccgctgccttctcctgtttgtgaagcatgtaggggccaccgttgcggttgctagctaggagctcctaaggcacagtctgagcattgcctccaccttctcgtcttcccatccccacgacttcgccctaaggtgtcatcaccaccttcgtgcgagctcttccaccaacgcctccctgtgagctctacctccgtattcgctgcagctgtggcgagggcgctgttgggcatggccagggtgcgcttgcgcgatggcgaaggagaaggcctgctggcggcggtagcatcaacagctagccaagctcatggagctccctccctcccctcccaattccaattggccctcgccgcctccgctcaccgagagagggcagcgaagggggagaggaaaaagagcagtgatgacaactgggccctaatttgcaaaatgattacacgacatatagatcacccatccaacactagacgatttgatttcctccaaccaaacaacatagtgttgacggttgttagcgatcagtttcgcccatcaatattattaaaataaaggaaaactagttatgcttacaatgcatattcatgtcaaaataaaatatattccattagcactaggttttctaaccttttggagagaatgatcataaatgaaggataagtgacagcaaaacatacgatcaatcaatcagacactatcaagaaacagacttatggacaaatgggttgagaacaccattttcacaagatccaacaagcccaaaattcacaagtttgcggagaggagcaaacggggaggccacctgccaagaactgggctggttgggccagcctagggttcggccgaaccagccgcagcgccgatggatgcagggtttcgctggatggttgggattgatccccaatgacagttggagggtattactgacctttctaaccgtcataaccgtcattaccagcctatataaacccctcactccctccatttcttcacacacctcaagcaagaagaatcaagctttctctctagtttagtagtgctctcaagctagtggagtaggaataaaataggagtcttagtccgagaagtcttcggaggaattcgggtatgactctagtagctttactttcttttgtaatacttatacttttattagaatattcttctttatactactctcgtagaatatatgagtaccaactttatcatacattcaaactatattgattatgatgctagcttatctggtaaatgcaatggtgtgggtataatgatcgtgcataccattgttctatgtcatgacgatgatattagagtagtatttcgtaatttaagcgtggtgtttagattactggatatcgttatttggggttatatactgcgaatacgttgaggtgggccgctgatggtgacagctcaatacgggtattcctccgcgcgtgtatatagtcctaagttactttcctggggagggtactcctccgtatttagccccggttagatggtcagggcggattatcataagaaactcgacaatcaggggtgacttctcgaagcaccaagagggcattggaaagagagtgttagctaagtaatcatataactttacttggatgtatgtatattagaagtataggaatagattctttctattctcttcgcacttagcttagataatttattatgagagtatataattctcttgttgtgtgtcattctaccctattcataatcttaacacctgtttccctctaaaaaaaaaaatcttaacacctgcttagactttgattattacaagtaatatataaattattagtatagttctctctattataatcttcccatgggattaaataaatacgatacccttgtgttaacgaccaaaattcataaatcatagattggatccgatgtcagaaccgaaacggatttggagaagatctgtagcctcagaaacagaacccgcatcggctacgagttgtatcggctaccgccttcatcggctgttaccagatcagacaaggaggagccgatgtagccgatcctggcaagacaatcatgggatcattaccgacggcagttcaagtgccgtgcaagtattgccaagcatggattgtggccagagaaagcaattgaatctattaattaggatattctagtagtttcattatagatattttcggtaagagtccgcctgagggacttgttcgtatttttgagttgtaatagagatagagtcgtgttcggcaaggacatatcatgtattttgggtataaatatgacccgggaccctgtaaataaacaatatcagttcaataacattttcggcgcatcgccaccattttctattttcattgtttcgacgagttcttgctttcgagttgggctgcatcggtttcgatctccgacgaaaaggtaaagcttgttatggcagcttgcgttcttgggattagtgcttacatctttatgacaccaggcaatcaggggtggcttctcgaagcaccaggagggtattggaaagagggtattagctaagtaatcatataacttggatgtatgtataatatgtatgtatattagaagtataggaatagattcgttctattctcttcccacttagcttagataatttatcatgagagtatataattctcttgttgcgtgtcattctaccctattcataatcttaacccctgcttagactttgattattacaagtaatatataaattattagtatagttctctctattataatcttcccacgggattaaataaatacgatacccttggaatattctcggataaaatgctacaatggtatatccgtgcgcatgtggatgaagtctataaccataatataccaagagtgtttctacaccatttctgggaattatatttctagtaatgtcgttaagaaatacaacacatagtagcttagatcttcaagacttgcacacagactattatcaagtactgattaagaaaaccaactttagagctgacctcatgcaaattgcgagaataccactacaagaaatttggccttctatgacaaatttcatatgacaaaacacattttagtcacagtattgatgcgtttatgacaatttttctttggatgacaagcgtttgtgactaagttataatttagtcataaacaaatgtcaccatgtgcctttcccattctttgtgacaatagttcaagacaaaagctcaaaaacaaggtgaggagattgagaacctaaagaaggcaataatagatactcagaaggcagcagcagatactcaaaacctcattcgagagatgatagcatttgaacagactcaggtcactcatcagaccactcctccttgacttggctgcgcttaggtacacatcttcatcttgtaatatgcttcttctgacataatgcagtttctatttcttgttcttagacctctcattttttttgatactatcagtagtattgtatgatatagttagatactggaatcaaatgaacttaggtactgtttggaatcaaaatctctactacaatgactttctatagttccaggactcatgaggctgaataaataaaaccattggcaaatataatttccgaaaggttgctgctcctagggactactagattcttgagcttgtgtttatttcttacaagtgttacctcctaaaacactgttctttgcaggctgttggactcattttggtgatctgtgaatggagtttggtgtgactgtgactggagtttgacaccacgtgttttgcttttggcatgactggactggagtgtggttgtttctgttagtgatctcgtgatgacaaaaactttgtgtatgctattgttgccatgactgaaactctaagtggagtggttgctgcagttggtgaacgggcgatgattggaagttgccatttgctgttgccttgactagaatgattttgatggatttatgtttggtattatttattagtgacttggtgatctgttggacttgtaggactttgatggacgtattttgttgtgattcatttgtatggatggtgaatgtttggaactatgtgtgtacaattatatggctgtatgaaccattaattttggaggacatgatctatttggatgtctaattatttttgttataaaattgtaagttgtttattacttatgatgattccttaaatgagcttgggctacaatatcagcagtaaaatgggcggctgaaatagtactgggcttacatgaaaaaaataaaaaggctgttgagaaatgggccaaaattggttggctggcccataggctagttaggcttatttgatttataattttaaaaccagctcatgttataaatgggccaaatttgtttttgtgacaattatttttgtcatactccacatgccatgtcacacgccacgtcatatgccacatcagatgactagacacttgtcagcatcccatctaatgtattatgacaaatatagtgacaaataccattgtcatagaccagtgacaagcatgcaattgtcactatgattaatgacaattgggtttattagtcatagaaggaggataatgacagggattcaatgactatagttattttgtcactagtgtgtcatagaaagggtacaatgacaattaattagtcatagaaggcctaagctcttgtagagttgtgatggctagctattgtttttagggttaattggatccatgccactacaaatatgccaaattagaaaaaatcactactattcgcgatatcggctgggtgccactaaaatttagggaaattggatccatgccactccatcgcgttttccatccactccccatcatgtctctctctccctctcacacctatagtatatacatggtgtcggttttattttgttttttatcttttgaaggagaaaagcactataagtgccggttttagctattccggcaacaataatgccgacttgtatgcgtcttttttaatagtgttttgaaaaatgaatctatatgatttttttaagcaacttgttttttaaaaaacgtaccgtttaacattttgaaaagcgtgcgcgcggataaagaggagagtggattccctctaggtgtcgaactctaggggagtgtggatcgtcatggagatcgtcgggcctgataacctgatgtagttgatgatgttgtagctttgccaattgccagtagtttgatctttgggtgctgcagcgctgtgtaggataacaattaacagtacatagtgagtagtatgtttatcagcgcaatctcttctagacttgcacacaaactattatatatcaagtatcattaaaaaaaacactttagagctgaccttatgcaaattgcgcgagtggcttgtgtttttatcagtccactttacagctgattattaaccttcatacacattgcaggattgactcgtattaatcttatttgagttggtggtgtttggtggttagaacctccctagaatcgatgcgtgtgcctcggaagctgggttttagacttctgtatatattttatatttctggagtatatataatacacgtcccggcaataatttttactcgataaaaaaaatcccaatttgcaccatcatctacttataaatgaaaatccatggatttctacgtgctacatcgatcagctcgcagagagttgcaggctaaagcatagagaatcgagaatgtgcatcgtggtgaccaagtcgccgccggagatcgtccggccatcggagccggtgacgacgacggcggcgaccggcaagatcattttctcgcctttcgacaagcctcttgccaccgtaccggtggtagtgttgcaggtgttcgagcatccgatccatgagcccgtggagaccatcaggaggggcctctcccatgcactggtccactactaccctctcgccggccgcctcgccggtgacgattacgacgacgtgcacatcgactgcaccggcgaaggcgtgaccatcgtcgccgcgtctgccaactgcaccgtcaagcagctcatgcgcgacatcgacggccgattacctgacccctcaacggcggttcaacgggagctcatcgtggacgacaacccggcctacggcttcggccgcgctgaccctctcattctgatgcaggtcaccaccttcacctgcggtggcttcgtcatcggggtgacatggaaccatggcgcggctgacggtttcgggatcgcgcagttcctgcaagccgtcggtgagctcgcccgcgggctgccgaccacgtccgtcataccagtcaggtcggacaagtcgttacaggccatgtcttcttccaccgtcatggccgccaagcaattcatgttcggcgtcaagccgacgacgctcgccctgcacagcatcaccatccctgcgagggtgatcaacggcgtccgaggtccgactccgacgtgcaccgtgttcgaggcggtggcggccgtgatgtggcgctgccgcacccgcgtggtgatgtccgaccccgacgcccccaccgtgctcgccatcacggtgaactctcgcaagtacgtgggcgtcaaggacgggtactacggcaactgcgccaccatgcagatggccgtggcgaggagcggcgtggtggcggacggcgatatgatggaggtggtgaggacgataaggcgcgctaaggaggagataccggagcggttgaagaagggagacgccatcgccgagctcagcaaggggcagctgagtgggtacgagagcgtgctgctggtgacgtgctggcgaaacatcggcttcgaggcggtggatttcggcggcgggaggacggcgagggtgatgacgacgtacgagcagagtggggtgcggccgctgtgcgtggtttgtctgccatggcaaggggaggaagatgaaggagccagggtgctgtccggctgtgtaacgcctcaccatgccgatgcttttctccgtgaaatagctacgctctga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0122500, RefSeq:Os10g0122500