Os10g0124100

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Revision as of 08:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0124100| Description = Conserved hypothetical protein| Version = NM_001070606.1 GI:115480955 GeneID:4348008| Length = 3385 bp| Definition ...")
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Gene Name

Os10g0124100

Description

Conserved hypothetical protein

Version

NM_001070606.1 GI:115480955 GeneID:4348008

Length

3385 bp

Definition

Oryza sativa Japonica Group Os10g0124100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:1511809..1515193

Sequence Coding Region

1511963..1512052,1513440..1513785,1513884..1515010

Expression

GEO Profiles:Os10g0124100

Genome Context

<gbrowseImage1> name=NC_008403:1511809..1515193 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:1511809..1515193 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaggtgcttcccgtacacgcgtaaccccgtggcggagtcgatgtcttcggcggcggcggcggcggttgagccggggatcgataagctccagaaagaaagggaaatgatgcaaaagaaggaaaagaaggaaaggaagaaagagaaaaggagacaaaagaaagctgcccagctgggtgagaaatatgagacagatgatcatcactctaagcatggccataagaagagaaagcactcaggctgtgaaatagttggcgaggagacaagaaaagtttgtaatgttaccatggagcatttggagaagagcagtctttctgaagagcatgaggctccttcctacagtcaggctttgcgttgtaccccagagagctcactggacagcactaagaggctgaggactgaagtgtcaagtagccctagtcaaaccagaaatggtgttaacattcgtgtaaagtttacacctacaaatcaaagaagagacccagaagcaacaacaggaatgtcaatgaaaccaagagttactgaacaatcaccagtcaaagaaaccggaatggatctgtccatggccaataggaagagagagttccagcctcatgtcaacacagtgtcagtggtgaaacaagttgtctcccaacagaagaacatgtctataaggaatggcaattgtttggatgagtcaagaaaagtcagtcagcagcatgatgcaaagtccatgcaaagagtcaatatggtgcagagagttagaactaagtcaacaccgattgctgcgatgcaaagagttgatccgccttcatctgagaaggcagtgatgcaaagagctaatcctgcgcccacaaaggttatgcaaggggttgaagctgcacctgtgaagtcaatgcagagagctaatcccacgtccacaaaggtgatgcaagaggttgaagctacacctgtgaaagcaatgcaaatagctggccatatcactctttcgaaagtgttcaacagagagagtactcaagttcagttgaggaaagaaacaggaggtcccctacttgggggccagcttaacacagggcgacctactctgctaaacaagcccaaggtgtgtgctgatccacctatcttgttaagcaagccggagatgttgtgtgttgagccacctggcttgttgaacaaaccgaaggcgcatgtcgaaccacctgttgtcaagcagcagcaacagattgtgcccgaagcacaagaagagccttgttctgttggaagtgtcttggcagcagcatccccagtaacagaggcacaacagtccagctctgaccggaaaagccgcaaggctgagaagaaagggaggaagcttgcagatttgtttgtgaactggaaaccatcacccacacagatggaagatacagatgttggtgaccaggactggctcttcagctgccgggcgacccctaaaaataactgcaggaccttcgatggatcagcaaggtgtcagcctaccgagcagctcttctcgctgcagcccagagcagtccatttgcctgaccttcttatgtatcagctgccgtttgttgtgcctttttag</cdnaseq>

Protein Sequence

<aaseq>MARCFPYTRNPVAESMSSAAAAAVEPGIDKLQKEREMMQKKEKK ERKKEKRRQKKAAQLGEKYETDDHHSKHGHKKRKHSGCEIVGEETRKVCNVTMEHLEK SSLSEEHEAPSYSQALRCTPESSLDSTKRLRTEVSSSPSQTRNGVNIRVKFTPTNQRR DPEATTGMSMKPRVTEQSPVKETGMDLSMANRKREFQPHVNTVSVVKQVVSQQKNMSI RNGNCLDESRKVSQQHDAKSMQRVNMVQRVRTKSTPIAAMQRVDPPSSEKAVMQRANP APTKVMQGVEAAPVKSMQRANPTSTKVMQEVEATPVKAMQIAGHITLSKVFNRESTQV QLRKETGGPLLGGQLNTGRPTLLNKPKVCADPPILLSKPEMLCVEPPGLLNKPKAHVE PPVVKQQQQIVPEAQEEPCSVGSVLAAASPVTEAQQSSSDRKSRKAEKKGRKLADLFV NWKPSPTQMEDTDVGDQDWLFSCRATPKNNCRTFDGSARCQPTEQLFSLQPRAVHLPD LLMYQLPFVVPF</aaseq>

Gene Sequence

<dnaseqindica>155..244#1632..1977#2076..3202#gaaccgaatcccctcctctcgaatctttcctcctctctcgcctcgccggcgaaaccctagcccagctgcggcggcggcggcgagaccgagagagagaggccggagagattttgtggggaggaggaggattggttgacggtagggcgggggggacatggcgaggtgcttcccgtacacgcgtaaccccgtggcggagtcgatgtcttcggcggcggcggcggcggttgagccggggatcgataaggttcgttcgctcgctcgcccgtcgagcaaagtccgattcggttttcccgaatttgtgctgtgctacggccgccgccgctgtcgaatcatcgactcttaattgcgattaggattaggattatgagcaggatctgaccaacgccgctagtaattaggcaggcacgggtgattggttgtttgtttgtttgtttgttggccatgcttgcttttgggttcttgtttgttggttgcttcaattgggattatagtggcatgttcttgagaacaaactaggattagggttatgtttggggattaggattaactgtctgtttggggagaatttggggaacaggattaactgtttgtttggggtgaaattctctgttcaagaaaaattggttcaggaaattggaaattgagcggagaagttgtgcttgattgattgcaaattagttaagtcttccgtgcctgttgctggtttatggttttccattatggaatgcaaatgcctctggtaggcaaaagttcagctatatttgggtgaaactgtcgttgattatcgttgattgcagaagatgattttgtttttcctccttaggtgaaaacatcttgtaatacaagataaatgtcctttttggtaaaatgtgacaacaagatgtagtcactcacaaatggcaataagagtgaaatttgttgctgtttgcttctaattacagacctcttctctgttacttccgtttatggaaatgtccattgtgtactttgcattgtcaaaaacctttctgccatctgtcttgactttttttttcaatgttttccggttccatttttttcctcgcccttaaatgttttatttacaatgtttaatgtcttgacttaattttttttatcaacatatgtttgatgttttctcttaaacaatgaaatcttttaaaatgttggtttcttgctctttattcatctgcggcttgctctaatgtttttgtgaaattgtgagatcatatttcagttccgttttgctttcctttgtcttggagtttattttagccagatcgtcttgtagtttgtttgaagtgtgcaaattttgttgccattttgctctatttgatagtacaatgggtgcttgtttgtactttgtgctggttggtaagtacatagcagggtatttgacacggtgactaacagaacgagtccattgcgaaacagttctagacttctagtgaactttgtaggttgaaggtaagcattgttggataattcaaaggggactggtttcttatctgttgagtccggattattgattatacgctagaaaaagtatcaatattggtgcattgttttcatgcctctttgcattcccgtcgtctgttctgaattggaactgacgattaatctggtggctgaagctccagaaagaaagggaaatgatgcaaaagaaggaaaagaaggaaaggaagaaagagaaaaggagacaaaagaaagctgcccagctgggtgagaaatatgagacagatgatcatcactctaagcatggccataagaagagaaagcactcaggctgtgaaatagttggcgaggagacaagaaaagtttgtaatgttaccatggagcatttggagaagagcagtctttctgaagagcatgaggctccttcctacagtcaggctttgcgttgtaccccagagagctcactggacagcactaagaggctgaggactgaagtgtcaagtagccctagtcaaaccagaaatggtaaggatttttctgttttttcttttttatttctgcaacctctttttatataagcaatatttctcaatatgtgatgctaatattatgtgcccttgcaggtgttaacattcgtgtaaagtttacacctacaaatcaaagaagagacccagaagcaacaacaggaatgtcaatgaaaccaagagttactgaacaatcaccagtcaaagaaaccggaatggatctgtccatggccaataggaagagagagttccagcctcatgtcaacacagtgtcagtggtgaaacaagttgtctcccaacagaagaacatgtctataaggaatggcaattgtttggatgagtcaagaaaagtcagtcagcagcatgatgcaaagtccatgcaaagagtcaatatggtgcagagagttagaactaagtcaacaccgattgctgcgatgcaaagagttgatccgccttcatctgagaaggcagtgatgcaaagagctaatcctgcgcccacaaaggttatgcaaggggttgaagctgcacctgtgaagtcaatgcagagagctaatcccacgtccacaaaggtgatgcaagaggttgaagctacacctgtgaaagcaatgcaaatagctggccatatcactctttcgaaagtgttcaacagagagagtactcaagttcagttgaggaaagaaacaggaggtcccctacttgggggccagcttaacacagggcgacctactctgctaaacaagcccaaggtgtgtgctgatccacctatcttgttaagcaagccggagatgttgtgtgttgagccacctggcttgttgaacaaaccgaaggcgcatgtcgaaccacctgttgtcaagcagcagcaacagattgtgcccgaagcacaagaagagccttgttctgttggaagtgtcttggcagcagcatccccagtaacagaggcacaacagtccagctctgaccggaaaagccgcaaggctgagaagaaagggaggaagcttgcagatttgtttgtgaactggaaaccatcacccacacagatggaagatacagatgttggtgaccaggactggctcttcagctgccgggcgacccctaaaaataactgcaggaccttcgatggatcagcaaggtgtcagcctaccgagcagctcttctcgctgcagcccagagcagtccatttgcctgaccttcttatgtatcagctgccgtttgttgtgcctttttaggttataagtttagatttagatgagtgacggttgtaagtagcttaatgggcagtggacaacaagaagctgtgaagctttgtgggaactgggagccgtgtttccttgcttcagttttccagcttatatgttctgttgtatgaaaatcattaaatcagtggagataataacaagcgaaaaaaaact</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0124100, RefSeq:Os10g0124100