Os10g0136500

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Revision as of 08:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0136500| Description = Similar to SRK5 protein (Fragment)| Version = NM_001070661.1 GI:115481065 GeneID:4348065| Length = 5128 bp| Definit...")
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Gene Name

Os10g0136500

Description

Similar to SRK5 protein (Fragment)

Version

NM_001070661.1 GI:115481065 GeneID:4348065

Length

5128 bp

Definition

Oryza sativa Japonica Group Os10g0136500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:2236501..2241628

Sequence Coding Region

2236530..2237301,2239196..2239297,2239535..2239716,2240210..2240420,2240526..2240766
,2240861..2241011,2241116..2241424

Expression

GEO Profiles:Os10g0136500

Genome Context

<gbrowseImage1> name=NC_008403:2236501..2241628 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:2236501..2241628 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacatcgtcgtcggcgtcctgctcatactgggcctcatgccgatgccgttcgaggtcatcatggccgccgccgacgatggtggcggcgtgttctgcgacaacctcaagttcgtgtccgcaaccctccccaacaaaacctcctcctccccgcaccactacgccaccgccgccgccggccaagcccccgacgtggtctacgtcctcgcgctctgccgcggcgacctcaacgacacagcttgcggcgaatccgtcgcctacacgttcgcgagactgatcaacgagtcgtgcgtcgccaactacacggccggggcttactacggcgactgcaccggcgtctactccttccagaactttctcgatccttccgacgccacagaagacgaggagcccttcgagaggtggaacgtcaacaacatcaccggcgacggcgagaacgtgcggttcatcgccggcctcatccaacagcttctgtcggaaacggtggagagggcggccggcgccgcggggcggtttgcgacgggcgtcgtggacaccggcaggacgttcccgctggtgtactcgctggcgcaatgcacgccggacctgtccgccggcgactgcctggcgtgcctccgccgcctcaccggcatgatcaactccaccatggccgtgcgcatgggtgcgcagatacatgtcacacggtgctacttcaggtatgaggcgtacgtgttctacgacagcaagcctatgctgcatctcaccggcgcgccggctccggccatccccaaaaggcataagagcaagctctgggtaattcccattgtcataattcctgtggtggcatttttctgcttcattgtttactgcggctggcggagggggcacagaaaaggtataatgggattacaagcaaggagaactgataacttgcagggagaggaagaattagtttgggacctagaaggaaaaaatccagagttttcagtatttgagtttgatcaggtactggaggctacaagtaatttttctgaagtaaacaagcttggagaaggtggctttggcgccgtgtacaagggccattttcctgatggaatagagatagcagtcaagagacttgcttcacattcaggacaaggtttcatagagttcaaaaatgaagtccagctcatagccaaactacagcacaggaatttggttaggctcttggggtgttgctctcatgaagaggagaaaattttggtctatgaattcttgccaaacaaaagcttggacttatttatctttgatgaaaataaaagagctttgctggattggtacaaacgtctagaaataattgaaggaatagcacatggacttctttacctacataagcactcccgattgagtgtcatacatcgagatcttaaaccgagtaacattctcttggatagcgaaatgaaccctaaaatttcagactttgggttagcaagaatatttagctcaaataacacagaaggaaacacaacaagaagagtggttggtacatacggctacatggctccggagtatgcttctgtgggcctcttctctatcaaatccgacgtattcagctttggtgttctatttcttgagattatcagtggaaaaaagaattctggttcccatcatagtggagactttatcaatctccttggatttgcatggtcactatggggagagggaagatggcttgaactcatcgatgaatcattagtttccaaatatcctcctgcagaaaatgaaatcatgaggtgcattaacatagcattgctgtgtgtacaagagaatgcagctgatcgaccaaccatgtcagatgttgttgcaatgctaagcagcaagacgatggtcctggctgaacctaagcacccgggatatttcaatgtgagagtggcaaatgaagagcaatctgttcttactgagccatgtagtgttaatgatatgaccatatctgccataagtgctagatag</cdnaseq>

Protein Sequence

<aaseq>MDIVVGVLLILGLMPMPFEVIMAAADDGGGVFCDNLKFVSATLP NKTSSSPHHYATAAAGQAPDVVYVLALCRGDLNDTACGESVAYTFARLINESCVANYT AGAYYGDCTGVYSFQNFLDPSDATEDEEPFERWNVNNITGDGENVRFIAGLIQQLLSE TVERAAGAAGRFATGVVDTGRTFPLVYSLAQCTPDLSAGDCLACLRRLTGMINSTMAV RMGAQIHVTRCYFRYEAYVFYDSKPMLHLTGAPAPAIPKRHKSKLWVIPIVIIPVVAF FCFIVYCGWRRGHRKGIMGLQARRTDNLQGEEELVWDLEGKNPEFSVFEFDQVLEATS NFSEVNKLGEGGFGAVYKGHFPDGIEIAVKRLASHSGQGFIEFKNEVQLIAKLQHRNL VRLLGCCSHEEEKILVYEFLPNKSLDLFIFDENKRALLDWYKRLEIIEGIAHGLLYLH KHSRLSVIHRDLKPSNILLDSEMNPKISDFGLARIFSSNNTEGNTTRRVVGTYGYMAP EYASVGLFSIKSDVFSFGVLFLEIISGKKNSGSHHSGDFINLLGFAWSLWGEGRWLEL IDESLVSKYPPAENEIMRCINIALLCVQENAADRPTMSDVVAMLSSKTMVLAEPKHPG YFNVRVANEEQSVLTEPCSVNDMTISAISAR</aaseq>

Gene Sequence

<dnaseqindica>30..801#2696..2797#3035..3216#3710..3920#4026..4266#4361..4511#4616..4924#ctgcgaggcagttagctagcttagacgccatggacatcgtcgtcggcgtcctgctcatactgggcctcatgccgatgccgttcgaggtcatcatggccgccgccgacgatggtggcggcgtgttctgcgacaacctcaagttcgtgtccgcaaccctccccaacaaaacctcctcctccccgcaccactacgccaccgccgccgccggccaagcccccgacgtggtctacgtcctcgcgctctgccgcggcgacctcaacgacacagcttgcggcgaatccgtcgcctacacgttcgcgagactgatcaacgagtcgtgcgtcgccaactacacggccggggcttactacggcgactgcaccggcgtctactccttccagaactttctcgatccttccgacgccacagaagacgaggagcccttcgagaggtggaacgtcaacaacatcaccggcgacggcgagaacgtgcggttcatcgccggcctcatccaacagcttctgtcggaaacggtggagagggcggccggcgccgcggggcggtttgcgacgggcgtcgtggacaccggcaggacgttcccgctggtgtactcgctggcgcaatgcacgccggacctgtccgccggcgactgcctggcgtgcctccgccgcctcaccggcatgatcaactccaccatggccgtgcgcatgggtgcgcagatacatgtcacacggtgctacttcaggtatgaggcgtacgtgttctacgacagcaagcctatgctgcatctcaccggcgcgccggctccggccatccccaaaagtaagactattcttggattctcaattagacctcgttcggttattccctacaactgtggaattaatcctctgggtgggcttgttcggttattctccacgactatagatggccaaaataggcgccacggccgggcccgggccgagatcacttgcccatgtccacttgctgcaccatcggtctaggcacggctcaataaaacttgggccttaccaagccagcccaaaggcatgaaagccatcatgctaaaagtttatttgaagtccctaatctctttcggcagtctcttaatggctgggataagtctatttgcatccctcgtttctttgggccatatcctatatatagatggccatatggcttgaggcccatggcccggcctaagacacgccattttggcccgcccaagcacggcacagcccgactcggggtcatgccggtgccggcctggcccgatagccgggccgtgcctcggccgcaccctcggcacggtgggccggcccggcacccaaccaaataaaaaaagtcgtgggatgcaaaatatacttgatgaaccatatcagacaggacccaaagagaagaggaatacataatagacttattttccagccatatagacctagcccacagagttgagggaccaaaaacagatttattatgtgaaaatcacaataagtcgtgccttcaagccggcccggcacaacccgagtcgtgttgggccatgcctgggccatgtgtgcggcccgtgggctggcacggcatggcccggagtgtaggtcgggccgtgccggcccaattaacctcggtccaggcatggccaggcctgggccgtgccgcccgtttggccatctatagtcctatatggctagaataagtctatttaactccctgatcatttgaccgggccatgctgggtcggcccatcgtgccgagggtgaggcccaagcacggcccaaaaatcgggcaatgccatactttaatttggtcaggccaaaaccccgtgccatgggccaagccgtcgggcctctggccttttggccaactatatccacgacggaggcaatggaggggattgagagggaatatataatccctatgtaaatctctctcaactctcttgtgggtgggattaaccactaaataagtccttaatcacgtccaatttctttctcataaagatcaaccgaacaagctttagagattacaaattccgtaaaattaatttaatcatatatatactcttcagatcccacatgtcagtcaccttagatgacgtcacatgacactagtatagcagagtaaatctttattgttcgattaaaaggaaggacatatggtcaaacctcacaccaaatgttttgaatttgtttgagtttagttaaaataaattaacttcagcaaaatcagattcaacctttttctttctgaaatttggaattcaccaaaattattatgtattcagattttcaacctcctgacccacatgtcagttactttagatgaccccacatgtcattgggaacatgagagtaaattcttaaattttgatctaaaggaacagtatatgatcaaatcgcctgctatgatttaaattcctttcttgttagttttgaagtgaaaaatgttcattgccttgaacaatttcgaatttgtttgactttaggtaaagttatttcaaattcagcaaaatctgttcaaattattttttttgaatttcctgaaatttgtaattcaccaaattatttcatattcacgttgtgaacctgtcccaatgcactatagttatgaatgatttgcaaaataatatccaatgtgtactattaatatattttccatgtatacaaattagcttctatctacttttgtttagacaaaagattgttatgtcatgttttagggcataagagcaagctctgggtaattcccattgtcataattcctgtggtggcatttttctgcttcattgtttactgcggctggcggagggggcacagaaaaggtaggttactaatttataaaatatttcatattgtttaaattacttaccgatgtcatggtcagttttttactgaggtacagatactaggagattctacattactaattaattaaaatcagagaaaatgacactagctagttaacattaggtggtctcagaccataaaaggtacctagtatagtgttgtgttcattagatataactgaacattgaagattgatattcttgattattcaggtataatgggattacaagcaaggagaactgataacttgcagggagaggaagaattagtttgggacctagaaggaaaaaatccagagttttcagtatttgagtttgatcaggtactggaggctacaagtaatttttctgaagtaaacaagcttggagaaggtggctttggcgccgtgtacaaggtaaaaatccaaaacacatagttccttcgttaacttttaaacatatatttgatcgtttgtctaattaaaagaactagtacaaatatgtaaaaatataggccatgtttaaggtactagtaatgataaaacaaattacaagaaataaataataattacataatatattttgtataagatgaatggacgaacatgttcataaaagtcaacagcgtcaaaggagtatgtgattataagtaatgggaaacctttctagtttaacctcagtagacaatatacaataaacatgcaactattatttaaaacgggttcaattttggcttgatgataattatcaggaattgaactttcggtctaaagttttatgagacctaaaccacaccaccctcatctccaaatatgcatccaaattagctactggtttcctggggacttttcatggatcaactagattttgcaccacaaaaaccactgaaggacttctatttttttgcagggccattttcctgatggaatagagatagcagtcaagagacttgcttcacattcaggacaaggtttcatagagttcaaaaatgaagtccagctcatagccaaactacagcacaggaatttggttaggctcttggggtgttgctctcatgaagaggagaaaattttggtctatgaattcttgccaaacaaaagcttggacttatttatctttggtatataatttgtattatatttctcagtataggttacatattttgataaaaaaaataattgttatgttctttttcctatcatactgatactttactgatgtgcagatgaaaataaaagagctttgctggattggtacaaacgtctagaaataattgaaggaatagcacatggacttctttacctacataagcactcccgattgagtgtcatacatcgagatcttaaaccgagtaacattctcttggatagcgaaatgaaccctaaaatttcagactttgggttagcaagaatatttagctcaaataacacagaaggaaacacaacaagaagagtggttggtacatagtaagtttcatgtaaattagtccacttatgaaatttatgttataactcaactgcacatacaatatataatttttacttgcatgtatcattttagcggctacatggctccggagtatgcttctgtgggcctcttctctatcaaatccgacgtattcagctttggtgttctatttcttgagattatcagtggaaaaaagaattctggttcccatcatagtggagactttatcaatctccttggatttgtgagtttacaaacacatatacaatattttaaaattgtcttttctgtctaagtggtgtttttcctacattaacctacctatattgttctcgaaatttcatacaggcatggtcactatggggagagggaagatggcttgaactcatcgatgaatcattagtttccaaatatcctcctgcagaaaatgaaatcatgaggtgcattaacatagcattgctgtgtgtacaagagaatgcagctgatcgaccaaccatgtcagatgttgttgcaatgctaagcagcaagacgatggtcctggctgaacctaagcacccgggatatttcaatgtgagagtggcaaatgaagagcaatctgttcttactgagccatgtagtgttaatgatatgaccatatctgccataagtgctagatagtttattcttcatgtgtcatgtggctttcgttgatccaatgtacgtagtatttgaagatatcataacagaattataatgctgtggtatttcaggtgtcggagtatgtactccccaaagagtgatcctagatttttgtatacaaacaaatggcttttgtatttatttggtgggtagcaaatcaataccataactatcgttggtgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0136500, RefSeq:Os10g0136500