Os10g0155400

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Revision as of 08:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0155400| Description = Amidase family protein| Version = NM_001070726.2 GI:297610122 GeneID:4348137| Length = 3030 bp| Definition = Oryza ...")
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Gene Name

Os10g0155400

Description

Amidase family protein

Version

NM_001070726.2 GI:297610122 GeneID:4348137

Length

3030 bp

Definition

Oryza sativa Japonica Group Os10g0155400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:3451167..3454196

Sequence Coding Region

3451167..3451715,3451844..3452058,3452602..3452832,3453549..3453747,3453831..3454196

Expression

GEO Profiles:Os10g0155400

Genome Context

<gbrowseImage1> name=NC_008403:3451167..3454196 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:3451167..3454196 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgccctccgccgcgcccgcgcgctgcctcctcctcctcctcctcctcgccgtcgccgtcgccggcgccgcgttcgatctcgaggaggccacagtcgactccatccgccgcgccttcgccgacggggagctcacctcgcgcggcctcgtcgagctctacctaagccgcgccgcggcgctcgacccgtccctccacgccgtcgtcgagctcgacccggacggcgcgctcgccgcggccgaccgcgccgacgacgcccgccgcctcttcgcgtccgcgggaggaggcgcgctcccgccgccgctgctgaacggcatccccgtcctcgtgaaggacaacatcgccgcggccggcggcggcggcgcgctgaacgcgacgtgcggctcgctcgccctggtcgggtcgcgccccgcgggcgacgccggggtggtcgagcggctccggcgcgccggcgcggtggttcttggcacggccagcctcagcgagtggtgcaacttccgcgcccccggcatccccgccggctggagcccccgcgccggccagggcaagaatccctatgtgccatcggcgacgccgtgcgcgtcgagcagtggctcggcgattgcagcggcggcgaacatggtggcggtgacgattgggacggagacggacgggtcaatcatgtgcccgtccagctacaattcggtcgtcgggattaagccgacggtggggctaaccagccgcgccggcgtcatcatcatttcgcctaggatggacaccgttgggacagtttcagatgctgtgcatgttttggaagcaattgttggatatgacccgcgagacgcagaggcaactcgtatggcgttgcaatatatcccagaagatggttataggcaattcttgaatatagatgggttaagaggcaagaggttgggaatccttaggaaagatttctttcggtttccctcgggctctgtccaacaaaaggtcttcgatgagcatttcaacactataagtaagatgggtgccatattggtggacaatctcgagataccaaacatgaacatcatcaacgatgcagtacaaagcggtgaacgtgctcttatgctagccgaattcaagttgtccctcaactcatacttgtctgaactggccagttcacctgtaagatcattatcggacataattgatttcaacaacaagcatccggtagaggaaaggatggctgaatttggtcagagttaccttctgcaatctgaagcaacagatggcactggtccaactgagaagaaggccattgcgaaactgaacgaactttgcgaaagtggcctcgagaaaataatgcgagttaatcaactggatgcaattgtttcaccaggtgcatctgctcatagcctgcttgcaatcggcggctatcctgcaatcacagttccagctgggtatgcatcgaatggtgttccttttgccatctgctttggaggtttgaaaggatcggagccaaggcttattgagatagcctattcgtttgaacaggcgacaaaagtgaggagacctccaactttgcagcattctatcatttga</cdnaseq>

Protein Sequence

<aaseq>MLPSAAPARCLLLLLLLAVAVAGAAFDLEEATVDSIRRAFADGE LTSRGLVELYLSRAAALDPSLHAVVELDPDGALAAADRADDARRLFASAGGGALPPPL LNGIPVLVKDNIAAAGGGGALNATCGSLALVGSRPAGDAGVVERLRRAGAVVLGTASL SEWCNFRAPGIPAGWSPRAGQGKNPYVPSATPCASSSGSAIAAAANMVAVTIGTETDG SIMCPSSYNSVVGIKPTVGLTSRAGVIIISPRMDTVGTVSDAVHVLEAIVGYDPRDAE ATRMALQYIPEDGYRQFLNIDGLRGKRLGILRKDFFRFPSGSVQQKVFDEHFNTISKM GAILVDNLEIPNMNIINDAVQSGERALMLAEFKLSLNSYLSELASSPVRSLSDIIDFN NKHPVEERMAEFGQSYLLQSEATDGTGPTEKKAIAKLNELCESGLEKIMRVNQLDAIV SPGASAHSLLAIGGYPAITVPAGYASNGVPFAICFGGLKGSEPRLIEIAYSFEQATKV RRPPTLQHSII</aaseq>

Gene Sequence

<dnaseqindica>1..549#678..892#1436..1666#2383..2581#2665..3030#atgctgccctccgccgcgcccgcgcgctgcctcctcctcctcctcctcctcgccgtcgccgtcgccggcgccgcgttcgatctcgaggaggccacagtcgactccatccgccgcgccttcgccgacggggagctcacctcgcgcggcctcgtcgagctctacctaagccgcgccgcggcgctcgacccgtccctccacgccgtcgtcgagctcgacccggacggcgcgctcgccgcggccgaccgcgccgacgacgcccgccgcctcttcgcgtccgcgggaggaggcgcgctcccgccgccgctgctgaacggcatccccgtcctcgtgaaggacaacatcgccgcggccggcggcggcggcgcgctgaacgcgacgtgcggctcgctcgccctggtcgggtcgcgccccgcgggcgacgccggggtggtcgagcggctccggcgcgccggcgcggtggttcttggcacggccagcctcagcgagtggtgcaacttccgcgcccccggcatccccgccggctggagcccccgcgccggccagggcaaggtcgcttcctcccatggtttcttgccgcagcaagcaattagcaatggcgaattggagctcacactgaacaatttgactgaatctgaaattctgaatgcaatgtgttgcaattggggttgctgctgcagaatccctatgtgccatcggcgacgccgtgcgcgtcgagcagtggctcggcgattgcagcggcggcgaacatggtggcggtgacgattgggacggagacggacgggtcaatcatgtgcccgtccagctacaattcggtcgtcgggattaagccgacggtggggctaaccagccgcgccggcgtcatcatcatttcgcctaggatggacaccgttgggtgagctcttgatagttgatactgactgaatattctgttctgttcagttctaacttctgaagcattgctgaaaaaagggtgatgttactgtctgaatctaacccaatattgtcacatattgcagtgagctgttgaattcatattttagtttgtttcttttctccatcagattaatgttggcgtgtcaatttgcagatggtacgcctcactgttcaagtaaaagatgacctttgttttgttaaatagacaacacttttgtgcttaaatactcagatagctactaaacacagtagtattttttttctggcaaagataaagctcagaagattttgggaagagaaaagtttcatgcaactaaatagagtgtattacagtggcaccttcttaactgagcaaactcacagaaatatatgacttcttgctcattattctaatcctcatttatattttctctagtcatttctatgatcttcctttcactcgtatggatttaatattgcacagtttattgatgtaatctagtcaatataggccaatttgtaggacagtttcagatgctgtgcatgttttggaagcaattgttggatatgacccgcgagacgcagaggcaactcgtatggcgttgcaatatatcccagaagatggttataggcaattcttgaatatagatgggttaagaggcaagaggttgggaatccttaggaaagatttctttcggtttccctcgggctctgtccaacaaaaggtcttcgatgagcatttcaacactataaggtagtttaccaacatatctttcattagtatcctttatcagtacatagtgttcattgttattttcgacctcaggaactactgtcctttattctagctagctggtaggtttgattcctccttaggttggaaatttgtgttcttctcttcttgttgagaatatatgttgtgctcctaggtattagcattatcttgaacaaatgttaataaaaggtgaaaatgtgtattttctatgtactgaagtgaatattttttaaataaactatcagatcttgggtaaagtaaaaggcatatgcacagaatccacataacgttccaactcttagtgcatgtggtttccagatggcaggattgtcaaaaaggctaactaaaaagccatccctcatatagtcaaatttaactatttatgtctgtactttctatactaccctttcctgggacatatacattaattttcagtaattatgtatcaggatctcgatatactgttgataataccatcttaaagcgttttttcttttagatgacaatgacaacgtcaacagtacaatcttatgcatattctagtctcaaaatgaatgagatcaaggtattattgacagaacgaaccatttaccatagtagatatctgtcctgttctctgcgactttgttgttcttttcctgaatatattagtttctttcctttctcctgattcctggatgctataaaactgaaagtaagatgggtgccatattggtggacaatctcgagataccaaacatgaacatcatcaacgatgcagtacaaagcggtgaacgtgctcttatgctagccgaattcaagttgtccctcaactcatacttgtctgaactggccagttcacctgtaagatcattatcggacataattgatttcaacaacaagcatccggtagaggtaaagatcgcatcaattcacgcgtatctcatttgcttgctaattttgtcgaaacacgaatggtaatctgttgcaatattcaggaaaggatggctgaatttggtcagagttaccttctgcaatctgaagcaacagatggcactggtccaactgagaagaaggccattgcgaaactgaacgaactttgcgaaagtggcctcgagaaaataatgcgagttaatcaactggatgcaattgtttcaccaggtgcatctgctcatagcctgcttgcaatcggcggctatcctgcaatcacagttccagctgggtatgcatcgaatggtgttccttttgccatctgctttggaggtttgaaaggatcggagccaaggcttattgagatagcctattcgtttgaacaggcgacaaaagtgaggagacctccaactttgcagcattctatcatttga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0155400, RefSeq:Os10g0155400