Os10g0170000

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Revision as of 08:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0170000| Description = Nucleotide-sensitive chloride conductance regulator family protein| Version = NM_001070766.1 GI:115481275 GeneID:4348...")
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Gene Name

Os10g0170000

Description

Nucleotide-sensitive chloride conductance regulator family protein

Version

NM_001070766.1 GI:115481275 GeneID:4348184

Length

7834 bp

Definition

Oryza sativa Japonica Group Os10g0170000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:4481080..4488913

Sequence Coding Region

4481127..4481287,4481391..4481514,4486905..4487022,4487561..4487620,4487690..4487749
,4487831..4487913,4488365..4488436

Expression

GEO Profiles:Os10g0170000

Genome Context

<gbrowseImage1> name=NC_008403:4481080..4488913 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:4481080..4488913 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgctaggcctctacgccttcgccgacatcgccgccgacggcgccccccacctcaactccgccgccggggaggagctcgtccgcgtcgagcgcgccgctgccgtcgccctcggctcccgcgcgccggagccccccgggaccctgttcatcaccaccaggagggtgatttgggtcagtgaggtggagaagggcaaggcctacgcggtggatttcctcgccgtctcgctccacgccgtctctcgcgatccggaggcgtactcctccccctgcatctacacgcagattgagacagaagatggttctgatgaggagtccgatgaatcagactccgaagtaaatgtggaaacagagctatcgaaagtcactgagatgcgtatcataccatctgatccttgtcagttggatggactctttgaagcattctcacattgtgctgaattgaaccccgatcctaatgctgagagtgatgaagagaatggctgggctcatagagatgaaggtgatgaagatatgactggtggaagtgatgctgaatgtgagttttcagatgtcaacccgataggtcaaactgatgaacatgatattactcatgctgtagttgagcttcagatcaatgaccaacgttttgaggatgcagaggaagcagaacatgagacgcatggaaatggacactaa</cdnaseq>

Protein Sequence

<aaseq>MVLGLYAFADIAADGAPHLNSAAGEELVRVERAAAVALGSRAPE PPGTLFITTRRVIWVSEVEKGKAYAVDFLAVSLHAVSRDPEAYSSPCIYTQIETEDGS DEESDESDSEVNVETELSKVTEMRIIPSDPCQLDGLFEAFSHCAELNPDPNAESDEEN GWAHRDEGDEDMTGGSDAECEFSDVNPIGQTDEHDITHAVVELQINDQRFEDAEEAEH ETHGNGH</aaseq>

Gene Sequence

<dnaseqindica>48..208#312..435#5826..5943#6482..6541#6611..6670#6752..6834#7286..7357#ggctaccccgtcgccaccgccgttcgtttcccaaattcacacaagccatggtgctaggcctctacgccttcgccgacatcgccgccgacggcgccccccacctcaactccgccgccggggaggagctcgtccgcgtcgagcgcgccgctgccgtcgccctcggctcccgcgcgccggagccccccgggaccctgttcatcaccaccaggtagtaaccgcgcttctcttcgttctccacttcccccaagtagttgcctctccattgcctctgacgcggcggagcgtgcgcgtgtgcttgtgtgttgagctaggagggtgatttgggtcagtgaggtggagaagggcaaggcctacgcggtggatttcctcgccgtctcgctccacgccgtctctcgcgatccggaggcgtactcctccccctgcatctacacgcaggtaatttctttcaactgtagtttgagatagcttggggggcgaacatttgtttgattttagagtattcacagggattggctgatcagctgtagggttttattagtgacatatttgagaaatttgtgcagcttgggtaatatataggatacattccctgtaattactactaatttagtgtttgaattagacttataatatggattggccatcatggtcatgttgttattcaattttatttcttaagttcgggtatctgtaattctgcattgttagcttttggttggggcttatggttcatgtgatgttagatatttttttattttgtttttttaatcaccagctattggtttcaacaaaacaaaaaaagaaaggaactaagtagctctaggaaagaaaaagcttgtgcgcttggagtttcaagtgcttcgggtccaactgagctacttctctttggagtttggaatatggcttggtcatgttttacacaatgtattgtctatagcacttatgaataatctttcatgataagttttatatattcattttattgcttatgtcgtgtatagtttctttggattacattcatttctggtgtatcatggcttgtttgtattcgactgctaagttagtaatgcaactatgtcacggtctcgaactcgtaggagagattcggtcgagtagagaagggaagagattgagagagttggcttgaggaagaagaagaagaagaataacagaacagaattgaacaggagagagatggaattgaatttgagtatgtttgattacatgattcgatccccttcctctcaatcctgctggctaatatagcatcgcactacacagcctctctcactcactgacagtggcccagccaatcactactaggtccacacacttacagggaaacgggagttggctgcttctcccttctgggccgattcacaggctgggccgctggcttctgctttgaactccctgctacagatgttgccgctgtgacatcccctcctccttcagttgaagcttgtccccaagcttcagagtcaggaaaacgatgacgaagttcttgagcattttcccaagtgaccacatgcggatcatctacagaccaccgaaccagcaactgctccaccatcttggatcctttccgaatgaagcgacgatccagcacttgcgatggaacaactgacgtaccagcagtggactgaattctgggcaattgagaatacaccacctcacttggcaccaatgctttcttaagctgtgagacatggaccaccgggtgtataagactggtagctggtaaagccaatttgtaagccacttcaccaactcgagagagcacctgaaaaggaccataaaaacgaaaagccaacttgcgattagcacgagtgaccactgactgctgcacaaccggctgtaatttgagataaacccagtcgctgacaacaaatgttctttcagagcgatgttgatcagcctgaaatttcatacgagcttgagcacgcaacaaatgatcccgaatcaaactctgaatctgctccctttcatgtaaccagtcagctaactcagtcgactgacaagctgcatttgctgacaaaccaaaataccgtggcttatgtccatataatacttcaaatggagtggtccccaaggctgaatggaaggaagtattataccaatactccgctagagccagccatcgactccactgagaaggacaagcatgcacaaagcagcgaaggaaagtctcaagacattgattcacacgctccgtttgtccatcagtctgaggatgataagaagaactcaaccggagttgtgtaccagccaacttgaatagagtagcccacagggtgcttgtgaaaatcctatcacgatcagagatgagtgactaaggtaatccatgcaatttatgaataaactgcatataagcttcggccacatccatagctgtgaaagggtgagcaagaggaacaaaatggctatacttggaaaacttgtcgactaccaccaggatacaattaaaggtagctgactttggtaagccttcaataaaatccaaagaaacaacttgccaagcatggtcaggtacaggcagtggttgcaacattcccggatacttgacatgttctgatttggcttgttgacaaacagagcaagcagtaacaaactgcataactgtagtgcgcaattgaggccaagcaaacagttgtttcaccctttggtaagtgacatgaatgcctgaatgacccccaactggtgcagtatgcaagttagccaaaatcttttgttgaactaaggtattgttacctatccacatccttttgagcaggtgtataacggtagggacgcacattgactggagtagctcctggcatgggtggaattgtatgatcaaaaaccctggacggtggtaatccagaaggttcttcaaacacctgtccaaattctgctagcacttgttgaatttccacaggaatttgctccttgtttgaagattctgacagagtgcacaactgaatcaggtgagagatggcctgtctatccttcaactccaaaaactgttgagaagagagttgagaacactgttcagtttctgacaaaattccctgtaatgtaatggattcctttctccaggaaactgtcaagagcttgttaacccaatcgacctgcataggactatgagccatcaaccagtccatgcctaaaatcatgtcataacttcccagatttaacacctttaagtcagtataaaacacccatccttgggtcatccattcacaccttggtactgaagtaagacaagtaagtatggaaccgtttgctactttcacttgtactggtggttcaagagttacaactccttgcaaggtttgagcaatcttagagctaataaaacttgctgtactacctgaatccaccaatataagcacttctttaccctgaacatatcccaacattctcatacagcccactgtttcaaagccatttatagcctgaactgaaattgacatcaatccaggactgtccagaccatcactttcgtcagaaataccctgatcagagagcaaatcggattgcaaaactgtgagcaattcttgaactgcatgcagttgtatagtgtttgcacacttatggattggagaccacttctctgcacatatgtaacataacccctgagctctacgctgagccttcagtgtagaaattttatcattactggtaccagtcttggtattgtcaagaaacttacgatcctctgatcgattcaaaacaccagagccacttccaaggtttggaggtaagggtaatggtaatgctcctttgaatgcgacatttggccgaatctgcaaatttccaccatcacttttcttcagatttggaactgacactgtcattgtctcagaaatcacttcttcttgcaacattgctactgccaaagcattctccaaatctttaggacgttgcagcagcactgcattcctgatttcttgacgcagtccctcagtaaaacgatgtgttagatatcgcatattcaaaacaggatcatatgtcagcaattgattcattaattcatcaaatctctcataatattcccaaactgttcctgtctgcttaatactatccatctgtctaatgagagtttcatgttggtccctatcaaatttgtgtgacacagcaatacaaaaattctcccacacaggaaatctaacatgagccttagaagaccgtaaccaggaagctgccctatccaaaaaataaattgtggctattctaacccacaaccctggaaaagtattattcacatcaaaataatgttcacatctcattttccaatcctctgggtctgttccatcaaacttagggaaatctaacttgggaaccctgtgattatactgacgcccaaactgatccccatcaaattccccaccccccaactcaaattgatcaaaatttttcagagatgtggaaggagattcatacgcacccttgaccggagtcgggcctagggttgcgttcatccccagtacccttccccggtgttcatgagcttgcagtcggccactggccaatttgtttccgccttccgccgcggcagcttgagatgaagttggcggcgtaggcagcagtggcgccttcctttcctcgtccgtcaacggaactcgaggggaagacgtcgccggagaagcctgcttcattttgccgacgagatccagttgctgacgaaggtcgccgacttcctcacgcaactcctgaactgctgcttctacttgaggtctccaactgctcacttcgcgatctagcttgacgaccgctgcttgagtttcgccttgagcacgattcagcctcaccaaggactcctagatctccatcaacaccttgccgaaatcaatgttctgcttctccatcgcttcgacttgaagttgcaaacgggaagtatatcgtggcttctccaggatcgaaattgctctgataccaaattgtcacggtctcgaactcgtaggagagattcggtcgagtagagaagggaagagattgagagagttggcttgaggaagaagaagaagaagaacagaacagaattgaacaggagagagatggaattgaatttgagtatgtttgattacatgattcgatccccttcctctcaatcctgccggcttatatagcatcgcactacacagcctctctcactcactgacagtggcccagccaatcactactgggtccacacactcgcagggaaacgggagttgggctgcttctcccttctgggccgattcacaggctgggccgctggcttctgctttgaactccctgctacagatgttgccgccgtgacaaactacaggctatgacccatttgactaaggtggagtttattttccttttctttgagaggattggcagaaattttctcctttggttcaccgggtactaacggatggacactgctattgtttattctctttggttttatccttttgatcttatagcattagtagatttcagtttgtacgcagcaaacaccagtgaaggtgatttttgctactagcatagtagcaaatagttgaaagataaatgtatggatgtaatttatcacgtgcagcctttttgtaatcttcatagagctggtacataattttcaactcaagagtgatcctagtctggatatatcatttgtcctgtatgctgggtgggtgcggagttcttcgtggtttttgtttagagctcttgtagctgctaaattttgaattctgaaatgtgatgttgatgtatttagtgaatttggcatatcacaattgattctttgtctattttcggtgttatcttttattatctgattctaatgtttgctattccctttgttggaattttcaaagattgagacagaagatggttctgatgaggagtccgatgaatcagactccgaagtaaatgtggaaacagagctatcgaaagtcactgagatgcgtatcataccatctgatccttgtcagtgtatcctttttacagtaaattgtctgatgtaggagcatttattggttttccttgtataaatctacctctgatgcttgcatactaaattttgatatgagtgcaggtttacatgaaataactatcatttctaatgctctatgttcatttttcattagctctttatttttaatttattctcatgactgtagcaactaatagtcatgattagatttgtttattcttgaagagtaggtcttcactctagagggtactactttaagaatgtaatgtgtgcattctgttccttcacaagtaaaaatttgcttgtcttatgttattcagttacaaatggttctctgttgggattaatagctaatcaagaataaactaccttgcataattagtatcatactgcagatcatcatggcagatatattttttatttccagcagtttgaaatgctatttatttgaagaattgactaatactatttcttgaagcatttgtatcttctattatatattcacattatatcttggatccttgacagaagtttcagtggatggactctttgaagcattctcacattgtgctgaattgaaccccgatcctaatgctggtaagttttaatagttaataaacaataaaagaatgttctttgtttgatgtatgcctttttaattaccagagagtgatgaagagaatggctgggctcatagagatgaaggtgatgaagatatgactggtggtaagaattcgccctgttcatttctcttttgtgttcatccaaacgttatgcataatcttttatgtattatcttgcattcaggaagtgatgctgaatgtgagttttcagatgtcaacccgataggtcaaactgatgaacatgatattactcatgctgtagttgaggtatgctgttggtttgttctaccattatgttttatgctttatatgattctgtgaaacgattgcaagtgaaataaaactcttgtgttataagcttggttgtaaaggttttttcttttcttcgggctcctgtgaatataatctgtatttactacaacatatggtataggaattggtaatggcatcctctcacgtcattttatttagaaactacgaccatatgtatatttcttactgtttttgtcacataatatgttaaggtatagttaattcatatacagatataccgtgtgattcagggtggcagttgattatcctttcaaaattattataaacatcaaacagttactttctgaacagtttgatctgtatactaagataaaactcttttgttccttcccctgccaatctcatgagctaactcgaacaaaaacctcataatgtccttatgcagcttcagatcaatgaccaacgttttgaggatgcagaggaagcagaacatgagacgcatggaaatggacactaatgcaggtgccttgttattttcttctctgaagaaaaaaaaaactggtttgttgtacatcgccaatgatgcacattgttgactaaagacttattttttgtttgtttcttttccttcccttttgagatgtcacagattaactcctttgggccaccttgtaaacttgcatcaatggcaacgtatgggagaaaaaaggtcttgctactggtcaagaaaaatgtaagctgaaagcatgctggaggtctttgtatgcgttgtcttctgtaaaatacatgtatgatcatgcaacttcatattcagagatattttgacaatgtgctcatggaaaacatccatactttgtaagtgttcaagcttaattgtcagatttttttttatttacatccttgatcgaccaaagatgtatgctgatagctgagcaacaaacatttccttttctgtagcatttgctactgatgaatggtcctgtgctcaatgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0170000, RefSeq:Os10g0170000