Os10g0177400

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Revision as of 08:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0177400| Description = TB2/DP1 and HVA22 related protein family protein| Version = NM_001070780.1 GI:115481303 GeneID:4348198| Length = 244...")
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Gene Name

Os10g0177400

Description

TB2/DP1 and HVA22 related protein family protein

Version

NM_001070780.1 GI:115481303 GeneID:4348198

Length

2449 bp

Definition

Oryza sativa Japonica Group Os10g0177400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:5025081..5027529

Sequence Coding Region

5025653..5026102,5026182..5026245,5026329..5026385,5026473..5026571,5027196..5027227

Expression

GEO Profiles:Os10g0177400

Genome Context

<gbrowseImage1> name=NC_008403:5025081..5027529 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:5025081..5027529 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgggcgatttcctctccagggtcctactgttggcctttggttatgcttatcctgcttatgaatgctataaaaccgtagagctgaacaagcccgagattgagaagcttattttctggtgtcaatattggatattagtcgcgctactgacggttttggaacgatttggtgattttgcaatatcatggctaccactgtactcagaagcaaagctgatgttctttatatacttatggtgcccaaggacaaagggaacctcctatgtctatgagactttctttaggccatacatttcacagtatgagaatgatatcgactgcagtattcttgatttgagagtaagagctggggacatgcttgtggtttactggcagaaggttgcaattattggccagactacattctttaacattttgaagtatgcttctgcacagtcaccagctcattcatcaaggtcgcgctcaacacaggtttgcaagcagaatgttttatcttctagtttgttgaatgataatggaacagcattcatcaatcaatgccttttgaacactcctacgtttggttcacaattcatatttatgcacaatctcttttgcctgctaatacctgagttgcaggtgtcctgctatcatagtttcgtagataagtgtcatgccgtagtactccaaactttctgtgcaactactccaactttgtgttaa</cdnaseq>

Protein Sequence

<aaseq>MMGDFLSRVLLLAFGYAYPAYECYKTVELNKPEIEKLIFWCQYW ILVALLTVLERFGDFAISWLPLYSEAKLMFFIYLWCPRTKGTSYVYETFFRPYISQYE NDIDCSILDLRVRAGDMLVVYWQKVAIIGQTTFFNILKYASAQSPAHSSRSRSTQVCK QNVLSSSLLNDNGTAFINQCLLNTPTFGSQFIFMHNLFCLLIPELQVSCYHSFVDKCH AVVLQTFCATTPTLC</aaseq>

Gene Sequence

<dnaseqindica>1428..1877#1285..1348#1145..1201#959..1057#303..334#actagtgaagtgttgcccgttgggtttggtggagtttgaagagctctgtcgccgtcttcactcctcgcagtcagacgggagtggactactggagggagagagagggtgagcgaggggatcttcactcctccagttcctccccatttcttgcatcccttccggatctatcagccccgtcaccaaccttcttccatccacgcttccatctgtacatctccttgctccgccctacacagttcttggttgtttcggagtagcagcatctcactggatctgttcttgtgcagaaagatcggagcaggatgatgggcgatttcctctccagggtcctactgtaagtccccccaatctgacgaaatctcccggtgtttcttcacgatttttgtgggtttgaccgtggggatggattcaagaaccgatttcttttttttttcatcttttgtgtttatatttttcgccttttttggaatgcgtgtgcgtcgatttgtctggcatcttcttcctttggaatagcatcgacaccactcaaacactgtgaaaatctgtacatctgtggtcgtccgttctttggaggaggatagtcattgttgttttgagtgtttaaggtcaatggttattccgctgaagattaatggtacactaaaactgtgtagtgaatctgtgatagtattaaaagatactcttacgatgttactgaaaggaatctgttgtttgcccatggttttaagtttcctgcgatttgcgcttgcgattgctcctgtcttgattcagttcagttgttcaaacacggccctaaaatctgtgcctatctttttttatgcaccaaaagaaaaagtggaatctatatcgttgcatcttcataacattcggattatgaggacattggtttctttggttggaactgcataatgtagaaaaaacgatgtactctggttctgatgggatgattatgatgcaggttggcctttggttatgcttatcctgcttatgaatgctataaaaccgtagagctgaacaagcccgagattgagaagcttattttctggtgtcaatattggtaaggagctatttttattcttgtggattcatggtttgcccacatccatacactgcaagtgccacttgaattgttgtttgtgtccaggatattagtcgcgctactgacggttttggaacgatttggtgattttgcaatatcatggttagttttttctgagatctttgttcctcagtcgttgattacaaactgttttgaatgcttaattgattctggttttattgaaggctaccactgtactcagaagcaaagctgatgttctttatatacttatggtgcccaaggacaaaggtactttactttaataatgatgtttttcttgtactgaatatatgattgccttcaagaataatgcgtgtgcttatgatagggaacctcctatgtctatgagactttctttaggccatacatttcacagtatgagaatgatatcgactgcagtattcttgatttgagagtaagagctggggacatgcttgtggtttactggcagaaggttgcaattattggccagactacattctttaacattttgaagtatgcttctgcacagtcaccagctcattcatcaaggtcgcgctcaacacaggtttgcaagcagaatgttttatcttctagtttgttgaatgataatggaacagcattcatcaatcaatgccttttgaacactcctacgtttggttcacaattcatatttatgcacaatctcttttgcctgctaatacctgagttgcaggtgtcctgctatcatagtttcgtagataagtgtcatgccgtagtactccaaactttctgtgcaactactccaactttgtgttaagttccatgagaaatagaagtttacattgttattgtggttgtatgtttgagatgattgtaatactcgaaaatagaatgaaccaaagatgttccataataacttgcttcaatcctaaactcttagcaagataatgtcacgaaagacgatatttaacagcaccttcaactatgtttgcgataaaggcattaaattaacaaaagtcaaaactaatcaaattaaagcaagataatgtcacgaaagacaatatttagcagttccttcaactatgtttgggataaaggcattaaattaacaaaagtcaaaactaatcaaattaaagcgagacaatatttaaattgctctgtatatttgtacaaacattatgtaatagaaaaaaacatccacgtgtggtatctaatagcaagacgtttaaggtgccgtatgaggttatagtgacccgttacaaggtgcatagggttgtagaaagaatgaccagccttcagttccacaaggttggcagccatccattgcatcactaaaagaacatagtgggggtcacaacagccaccaagacaaagcagcaagcctggtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0177400, RefSeq:Os10g0177400