Os10g0207100

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Revision as of 08:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0207100| Description = Protein kinase-like domain containing protein| Version = NM_001189139.1 GI:297727408 GeneID:9266040| Length = 5908 b...")
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Gene Name

Os10g0207100

Description

Protein kinase-like domain containing protein

Version

NM_001189139.1 GI:297727408 GeneID:9266040

Length

5908 bp

Definition

Oryza sativa Japonica Group Os10g0207100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:7322872..7328779

Sequence Coding Region

7322872..7322876,7323922..7324037,7325422..7326843,7326927..7328306,7328400..7328779

Expression

GEO Profiles:Os10g0207100

Genome Context

<gbrowseImage1> name=NC_008403:7322872..7328779 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:7322872..7328779 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaggttggaaagtgatctggttttcttggatatcatcgttgatttgctgagcagctctttggacgttcggttcttcccctctgaagatcttcgcgtttctctgcagccagacacagaatgcatatccgctgttgtgttgatctctttgtccactatgattgctgcttcttcgggtctgagtatgagcaacagcagcaacactgacctcactgcactgatggctttcaaagcgcagctctccgaccctctcggcatccttggaagaaactggactgttggcaccccgttttgccattgggttggggtctcctgccgccgccaccggcagcgtgttactgctgtggagctgccagatgttcccctgcaaggagagctcagccctcacatcggtaacctctctttcctatctgtactcaacctcagcaacaccggcctcatgggttcagtcccggatgatataggaaggctgcatcgcctcaagatccttgatcttggtcacaatgacatgttaggaggtgtcccagccaccatagggaacctgacgaggcttgatgttcttgatctcgagtttaacagcctatctggtccaatcccagtagagttgcgtctctcgcacaaccttcgcagcataaatatccagatgaattacctcaccggcttgataccaaatggcctattcaacaatacaccttcattaaaacatctaatcatcggcaacaacagcctgtctggaccgataccaagttgcattggctccttgccattgctcgagcgccttgtccttcagtgcaataatctcaccgggccagtgccaccttcaatctttaacatgtctagactacatgttattgctcttgcctcaaatggcttaactggccctatcccaggcaacaaaagtttcatcctcccgattctgcaatttttctccctcgactacaattatttcactggtcagattccactagggcttgcagcgtgtcggcaccttaaagttttttccctgcttgataatttgattgagggtcctttgccctcatggctgggcaagttaaccaaactcaatgtcatctccttgggtgagaatctccttgttgttggtccaattcgagatgcactaagcaacctcaccatgctgaatttcctagacctcgcaatgtgcaacctaacaggagccatcccagcggatcttggacagataggccatctttcagtcttgcgtctttcaacaaatcaactaacaggacctattcctgcttctcttggtaacctgtctgcattatctgtcctgctattggatgacaaccacttggatggtttactaccaacaacaattggcaacatgaactcattaacagaacttattatttctgaaaacggcctacagggggatctcaatttcctttctgctgtttcaaactgtagaaagctttctgttctatgtatcaactccaatcgtttcacgggaattctcccagactacctggggaacctatcaagtacgctggaatcattccttgcatccagaatcaagttaagtgaatcaatcatggagatggagaatctccatatgcttgatctcagtggaaataacttggcgggctccatcccatcaaacacggcaatgctaaagaatgtcgtaatgttgttccttcaaaataacgaattctctggctccataatagaagacattggcaacctcaccaaattagagcacttaagattatctaataatcaattatcatcaacggtaccaccgagtttatttcaccttgatagcctcattgagttagatctgtctcgaaacttgttcagtggtgcattgccagttgatataggtcatctgaagcaaatttacaagatggacctctctagcaaccactttcttgggagcctgccagattcaattgggcaaattcagatgataacctacttgaacctatccattaattcattcaatgattcgattccaaattcttttggtaacctgactagcttgcaaactttggatctatcgcataacaatatttctggtaccatcccgaagtacctgtcaagttttaccatgctcgctagcttgaacctatctttcaataatttacatggtcaaataccaggaggaggtgtcttctcaaacatcactttgcaatctttagtggggaactcagggttatgtggtgttgtccgtctaggatttgcaccgtgcaaaacaacctatcccaaaagaaatggtcacatgctaaaatttttactccctactataatcatagtagttggggctgtagcttgttgcctatatgtaatgattagaaagaaagttaagcatcaaaagatttccactggtatggttgacacggtcagccatcaattactctcctaccatgaactagttcgagctactgataatttcagtaatgataacatgctggggtctggaagctttggaaaagtttttaagggccagctgagcagtggtttggtggttgctataaaagttatacatcagcatctggaacatgccgtgagaagtttcaatactgagtgtcgtgtgcttcgaatggctcgacatcgcaacttaataaagatagtgaacacttgttccaatctggactttagagcactagttcttccctacatgcccaatggaagcttagaggcactcctgcactctgaaggaagaatgcaattaggttttctccaaaggttggatattatgctagacgtatcaatggcaattgaatacctgcaccatgagcactgtgaggtgatcctacattgtgacttgaagcctagcaatgtactatttgacgatgacatgacggctcatgtatcagactttggcattgcaaggttgctgttaggtgatgacagctccatgatctcggcaagcatgccaggtacagttgggtacattgcaccagagtatggagctcttggaaaagcatcacggaagagcgatgttttcagctatggaatcatgctgcttgaagtgttcactggaaagagaccaacagatgcaatgtttgtgggagaactgaacaacaggctgtgggttagccaggcatttcctgcagagctcgtccatgttgtggacagccagcttttgcacgatggctcatcttctactactaacctgcatctgcatggcttccttgtgcacgttttcgagctgggtttgcactgctcagctgactacccagagcaaaggatggcgatgcgtgatgtggttgtgacactgaagacgatcaggaaggactatgtcaactggatggtattaatggggagcactgcccagcagtga</cdnaseq>

Protein Sequence

<aaseq>MERLESDLVFLDIIVDLLSSSLDVRFFPSEDLRVSLQPDTECIS AVVLISLSTMIAASSGLSMSNSSNTDLTALMAFKAQLSDPLGILGRNWTVGTPFCHWV GVSCRRHRQRVTAVELPDVPLQGELSPHIGNLSFLSVLNLSNTGLMGSVPDDIGRLHR LKILDLGHNDMLGGVPATIGNLTRLDVLDLEFNSLSGPIPVELRLSHNLRSINIQMNY LTGLIPNGLFNNTPSLKHLIIGNNSLSGPIPSCIGSLPLLERLVLQCNNLTGPVPPSI FNMSRLHVIALASNGLTGPIPGNKSFILPILQFFSLDYNYFTGQIPLGLAACRHLKVF SLLDNLIEGPLPSWLGKLTKLNVISLGENLLVVGPIRDALSNLTMLNFLDLAMCNLTG AIPADLGQIGHLSVLRLSTNQLTGPIPASLGNLSALSVLLLDDNHLDGLLPTTIGNMN SLTELIISENGLQGDLNFLSAVSNCRKLSVLCINSNRFTGILPDYLGNLSSTLESFLA SRIKLSESIMEMENLHMLDLSGNNLAGSIPSNTAMLKNVVMLFLQNNEFSGSIIEDIG NLTKLEHLRLSNNQLSSTVPPSLFHLDSLIELDLSRNLFSGALPVDIGHLKQIYKMDL SSNHFLGSLPDSIGQIQMITYLNLSINSFNDSIPNSFGNLTSLQTLDLSHNNISGTIP KYLSSFTMLASLNLSFNNLHGQIPGGGVFSNITLQSLVGNSGLCGVVRLGFAPCKTTY PKRNGHMLKFLLPTIIIVVGAVACCLYVMIRKKVKHQKISTGMVDTVSHQLLSYHELV RATDNFSNDNMLGSGSFGKVFKGQLSSGLVVAIKVIHQHLEHAVRSFNTECRVLRMAR HRNLIKIVNTCSNLDFRALVLPYMPNGSLEALLHSEGRMQLGFLQRLDIMLDVSMAIE YLHHEHCEVILHCDLKPSNVLFDDDMTAHVSDFGIARLLLGDDSSMISASMPGTVGYI APEYGALGKASRKSDVFSYGIMLLEVFTGKRPTDAMFVGELNNRLWVSQAFPAELVHV VDSQLLHDGSSSTTNLHLHGFLVHVFELGLHCSADYPEQRMAMRDVVVTLKTIRKDYV NWMVLMGSTAQQ</aaseq>

Gene Sequence

<dnaseqindica>1..5#1051..1166#2551..3972#4056..5435#5529..5908#atggagttctctaaatatactttaagatcagtgctatacgtactaaaagtttcttataaaactcttacaaacaaatatcttaaccattaatttatttactcagttggtagttatgaaaaatcaagatacaagtacatcatgccatataagttctaaagagtcagtaagattctttttggtatgtgtcattttccatctttaaatagtgtatcatccatcatgttagaccagattctattttagtgatactaggaacatgacgtacaattaactttgccaactatgtgaaaaaaaatgaagcatcattccagttgttacctaatgtaattctgatttctgtattagcagctgtctaattatgtttttttcttcacttaatttataaactttaattagaattacatcctaatgatagcatctccttttgtgtacagttgcacttcaagggtttagcagaattactcaaaacatttcctgtaactaatgaatttgacaaaaaaaattgtaagagatgttgatggtcttgtgatttaaatccttaagtatgtctttaataacctggaataatctacaccaatttttgtagtgttatttattccattagtaaaagttggtgtgcattcatgaattaaatatcaaacgatgtttgacaattattcttaccatttgacagatgccactgggcagataattaaattattgtttaaattttcatgaacttgatatatttacgcaggttgatgttccatcgaaaacatagggtcctcaaacgttactactaacacgaaggtgtaaaaatgccagtgccctcttatatgtcaaattgaacataaatcactgcgagcaacaattattctccctgcatccaggtaatctacatgtttttttttacgtgaaagcggcaagagtattgccgaatatattagaaggagaagtgcgggttgcatagttgttacaagtggactattacagtatgaatgtaagcaactcacagaggtaaaagctgaaaatatcagcatatcgcagcttataacaaccgaatcgttcaaggaggttggaaagtgatctggttttcttggatatcatcgttgatttgctgagcagctctttggacgttcggttcttcccctctgaagatcttcgcgtttctctgcagccagacacaggtaatctatatgtcaatctgcaattacatacaaatataacacaacactgaaagcaaaactcaaacagtatcaatcaatgaccatctaggttgacggagtcaaaggcatctgtttcggttgttgctgataggtttcatgtcatttttttcagataatgaataggtttcataccagtattagtatagcttttcgaatctaagtaccaatttgtggtttccaacaatcaggttcaaatctagatacaaatttgtaccgtacagcatttaggttaattggttaatcatgtttagaggggcaacgtgaaaaacacaagcatacttggtttgtggaaaaggttgattctgcactagtatttacatcactttccagtccaacttttacacttttgagtgggctagatgggagaggaaacttaatcacggagtgttaatgtgtgtgttagttggcagtaaaaagatactgttatcagcctgggcttaaattgacctgttttgatatttcagaatatttgataaatgcgaacttaatttttgaagtccttagtataatttaaaattctgactaaccaaacttaaaaccttataatcatacaatatattagaaaccaaatttatttaggtacacttaaattccgcaaatcatatactggaccttggatgtgttctgttatgttgcttgcatccatgccatgcaaacattagtgttgccatgttagctcttgacattgctcactcatgaccaacatactaagcatgcaaatagttttgttgtgaaactacctctaaacgatgcaatgctagaaccaaggtatgtattacgaaaaaaaaaaagaaccaaggtatgtatttacctcttcagagataagtgcctaagtggagcgtgtcagaaaaattcttttcagtaagcgcttgcatgtctgcctgccacaaaatggggcatgaatctcccaagatatctttcaccactttcctacttgcatttgcatggcatgtcatacactccggaataatctgttgaatagactttttgtgatggctttgatttcttttgaaacaacttgatgtctttattttccaatctaccagcgcctacaagcttctggtcctaacattacgtttacgattagtgctttgtgcacttgcttttcttttcattttgaatgggaacagtaggaaaggatcctactatagtttcctgcacaatctcactcgggtaatcgggttgaccaattgtcaaggtcttgggtgtagaacgcaccatttgcttgcatgcacgatggaatgggtagataaaacattaaggcctatatatgcagccccgagaagtaacactgtcttgttgccaatgcatcatacacactgagatatggcgcttggatttccagaatgcatatccgctgttgtgttgatctctttgtccactatgattgctgcttcttcgggtctgagtatgagcaacagcagcaacactgacctcactgcactgatggctttcaaagcgcagctctccgaccctctcggcatccttggaagaaactggactgttggcaccccgttttgccattgggttggggtctcctgccgccgccaccggcagcgtgttactgctgtggagctgccagatgttcccctgcaaggagagctcagccctcacatcggtaacctctctttcctatctgtactcaacctcagcaacaccggcctcatgggttcagtcccggatgatataggaaggctgcatcgcctcaagatccttgatcttggtcacaatgacatgttaggaggtgtcccagccaccatagggaacctgacgaggcttgatgttcttgatctcgagtttaacagcctatctggtccaatcccagtagagttgcgtctctcgcacaaccttcgcagcataaatatccagatgaattacctcaccggcttgataccaaatggcctattcaacaatacaccttcattaaaacatctaatcatcggcaacaacagcctgtctggaccgataccaagttgcattggctccttgccattgctcgagcgccttgtccttcagtgcaataatctcaccgggccagtgccaccttcaatctttaacatgtctagactacatgttattgctcttgcctcaaatggcttaactggccctatcccaggcaacaaaagtttcatcctcccgattctgcaatttttctccctcgactacaattatttcactggtcagattccactagggcttgcagcgtgtcggcaccttaaagttttttccctgcttgataatttgattgagggtcctttgccctcatggctgggcaagttaaccaaactcaatgtcatctccttgggtgagaatctccttgttgttggtccaattcgagatgcactaagcaacctcaccatgctgaatttcctagacctcgcaatgtgcaacctaacaggagccatcccagcggatcttggacagataggccatctttcagtcttgcgtctttcaacaaatcaactaacaggacctattcctgcttctcttggtaacctgtctgcattatctgtcctgctattggatgacaaccacttggatggtttactaccaacaacaattggcaacatgaactcattaacagaacttattatttctgaaaacggcctacagggggatctcaatttcctttctgctgtttcaaactgtagaaagctttctgttctatgtatcaactccaatcgtttcacgggaattctcccagactacctggggaacctatcaagtacgctggaatcattccttgcatccagaatcaagttaagtggtaaacttcggcaaccatttctaatttaactggcctcaagctgctagatctttcggaaaaccaactgtttagtgcactaccagaatcaatcatggagatggagaatctccatatgcttgatctcagtggaaataacttggcgggctccatcccatcaaacacggcaatgctaaagaatgtcgtaatgttgttccttcaaaataacgaattctctggctccataatagaagacattggcaacctcaccaaattagagcacttaagattatctaataatcaattatcatcaacggtaccaccgagtttatttcaccttgatagcctcattgagttagatctgtctcgaaacttgttcagtggtgcattgccagttgatataggtcatctgaagcaaatttacaagatggacctctctagcaaccactttcttgggagcctgccagattcaattgggcaaattcagatgataacctacttgaacctatccattaattcattcaatgattcgattccaaattcttttggtaacctgactagcttgcaaactttggatctatcgcataacaatatttctggtaccatcccgaagtacctgtcaagttttaccatgctcgctagcttgaacctatctttcaataatttacatggtcaaataccaggaggaggtgtcttctcaaacatcactttgcaatctttagtggggaactcagggttatgtggtgttgtccgtctaggatttgcaccgtgcaaaacaacctatcccaaaagaaatggtcacatgctaaaatttttactccctactataatcatagtagttggggctgtagcttgttgcctatatgtaatgattagaaagaaagttaagcatcaaaagatttccactggtatggttgacacggtcagccatcaattactctcctaccatgaactagttcgagctactgataatttcagtaatgataacatgctggggtctggaagctttggaaaagtttttaagggccagctgagcagtggtttggtggttgctataaaagttatacatcagcatctggaacatgccgtgagaagtttcaatactgagtgtcgtgtgcttcgaatggctcgacatcgcaacttaataaagatagtgaacacttgttccaatctggactttagagcactagttcttccctacatgcccaatggaagcttagaggcactcctgcactctgaaggaagaatgcaattaggttttctccaaaggttggatattatgctagacgtatcaatggcaattgaatacctgcaccatgagcactgtgaggtgatcctacattgtgacttgaagcctagcaatgtactatttgacgatgacatgacggctcatgtatcagactttggcattgcaaggttgctgttaggtgatgacagctccatgatctcggcaagcatgccaggtacagttgggtacattgcaccaggtactataccatactcgtagcttttttactctttcaagtttatcttttttactgccattgagtggtttattactaactttttttattgagtagagtatggagctcttggaaaagcatcacggaagagcgatgttttcagctatggaatcatgctgcttgaagtgttcactggaaagagaccaacagatgcaatgtttgtgggagaactgaacaacaggctgtgggttagccaggcatttcctgcagagctcgtccatgttgtggacagccagcttttgcacgatggctcatcttctactactaacctgcatctgcatggcttccttgtgcacgttttcgagctgggtttgcactgctcagctgactacccagagcaaaggatggcgatgcgtgatgtggttgtgacactgaagacgatcaggaaggactatgtcaactggatggtattaatggggagcactgcccagcagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0207100, RefSeq:Os10g0207100