Os10g0320400

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Revision as of 08:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0320400| Description = Similar to ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14)| Version = NM_001070874.1 GI:115481491 Gen...")
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Gene Name

Os10g0320400

Description

Similar to ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14)

Version

NM_001070874.1 GI:115481491 GeneID:4348305

Length

5328 bp

Definition

Oryza sativa Japonica Group Os10g0320400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:8889260..8894587

Sequence Coding Region

8889319..8889422,8890271..8890314,8890418..8890570,8891162..8891275,8891355..8891482
,8893185..8893307,8893400..8893516,8893689..8893810,8894145..8894214

Expression

GEO Profiles:Os10g0320400

Genome Context

<gbrowseImage1> name=NC_008403:8889260..8894587 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:8889260..8894587 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatggcggcgctgcgacgggacgggaggcgcgtcctcctctcctccaccccatccccggcggccgccatggccgcgcgctcccccgccgccgcccaccaggagattgccccactaggcgcacgttctgtttcaacacaagttgtgagaacccgcatgaagagtgttaggaacatccagaagattacaaaagcaatgaagatggttgcagcatcaaagcttcgagctgttcaaataagaacagaaaattcacgtggtctatggcagccattcaccgctcttcttggggatgtccctagtgtcgatgtcaagaagaatgttattgtagccattacctctgacaagggtctttgtggtggtatcaactcaacgtcagttaaagtcagcaaagcactccacaagttgacttctggaccagagaaagaaagcaagtatgtcatattaggagaaaagggtaaagttcaactcattcgtgactccaaggataacatcgagatgacagtatctgagttgcagaagaaccctatcaactacacacagattgctgtgctggcagatgatatcttgaaaaatgttgagtatgatgctctaagggttgtttttaacaagttccactcggtcatatcattcaagcccacaatgacaaccatactttccccagaggttatggagaaagaatcggaatctggtaaggttggtgacctggattcatatgaaattgaaggaggtgaaactaaatcagaaattcttcagaatcttaccgagttccagttttcttgtgttatgtataatgctgctctagagaatgcatgcagtgagcttggagcacgtatgtctgccatggacagctccagcagaaacgctggtgaaatgcttgatcgactcaccctcacatacaacaggacacgtcaagcatctatcactacagagctcattgagattatctctggcgcttctgcccttgagggataa</cdnaseq>

Protein Sequence

<aaseq>MAMAALRRDGRRVLLSSTPSPAAAMAARSPAAAHQEIAPLGARS VSTQVVRTRMKSVRNIQKITKAMKMVAASKLRAVQIRTENSRGLWQPFTALLGDVPSV DVKKNVIVAITSDKGLCGGINSTSVKVSKALHKLTSGPEKESKYVILGEKGKVQLIRD SKDNIEMTVSELQKNPINYTQIAVLADDILKNVEYDALRVVFNKFHSVISFKPTMTTI LSPEVMEKESESGKVGDLDSYEIEGGETKSEILQNLTEFQFSCVMYNAALENACSELG ARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG</aaseq>

Gene Sequence

<dnaseqindica>60..163#1012..1055#1159..1311#1903..2016#2096..2223#3926..4048#4141..4257#4430..4551#4886..4955#tcttgcggccacacgagccaagcagcgagacccccggatcgaaacgcacaccggcggcgatggcgatggcggcgctgcgacgggacgggaggcgcgtcctcctctcctccaccccatccccggcggccgccatggccgcgcgctcccccgccgccgcccaccagtaagatcccctttcccttttcccgctccgcctcccccccctctctctctccgccagatccgcctccggttcgattcgtccgtctccgctggatctggctgcggatctggtgttcccgtgggcgagtttattgggcgaccagtggattcattaccctcggatttgaggcgcatctagggcgaattggagttggtgcttgcggctgcgaaatgtatgtgtgggtgtgttatgggttgtggtggtgattgcgtagacgaaggatttgtagtctccttttcttttcccacctttagtggacgagattggaatccgtatgaactttggctgcatccccttatggattatgaaatggatgtgaatgctggaaaagggttctgatgcactgctacaagggagaaaaaaaatccatatgtagttgtaactttaatctcacatgctgttgactggttcggcatgttgtttggtttgtgattgtccacacggattgcaaccgctcataaagtatgacttgtatagaaaccactcatgtttctggtgggttttactctcattgtcttgcattgaatgattagtacgaaatgtgcagtgtcatagatgtcatttcttgtttgttaaaattgtagcctcgtatagctggttacttttgttgcaaacaatatgacattatattgttaattgcacatttttatcgtgcatgtaagtatttacaccaaattccttggaattatctctctgcatgatccatgcttttgttatacatgactgctcgatttctctttaaattattcgcttcttgcttccactatgtattactttctaactgaatatactgcgtatttaaaaaccagggagattgccccactaggcgcacgttctgtttcaacacaagttggttaggatcttccttctctattctatttctttccgaacatatatattgaccctggcaattgaagcaaattattggcccctcaactaataatacttttttacagtgagaacccgcatgaagagtgttaggaacatccagaagattacaaaagcaatgaagatggttgcagcatcaaagcttcgagctgttcaaataagaacagaaaattcacgtggtctatggcagccattcaccgctcttcttggggatgtccctagtatgttatgtttcgttgtagtacatatttacagtacctttctgccgtagttattatagctaaagttgatgcctatcttattgaatgtcatgatatgctagaagcctatggctacattagcatgcctggctgccacaaatcaaatgtacaaccttattcatgatctaggaagttcatttgatgttggttcttaaaagtcaatggcattcaaggtaagagatatttgatggtgggtaattatccctggtaaagaaatatgtagatatatatactatgggtgaatcttctgagctattggttcagtggtgtaagcatggactctacatctatttactagacacgcttctcactaatttataaatgcaccacaggtctcatgccacttctaatgatgctgtgatcctcaattcatgaggaaacattgataggcttgcctgttgagtttactccatgcttggatctgtctaaattatttaattcttacggaacagcagttttaatttaactgaattagattgacatcatgtctttttggcaataagattattgagtttttggtttagttattaatgtctttgatgcaaccaccaggtgtcgatgtcaagaagaatgttattgtagccattacctctgacaagggtctttgtggtggtatcaactcaacgtcagttaaagtcagcaaagcactccacaagttgacttctggtaatactttgcatggttatttttgttatcatttaaacattagaagatactaaaacaaagtttttgcacctcaaatcaggaccagagaaagaaagcaagtatgtcatattaggagaaaagggtaaagttcaactcattcgtgactccaaggataacatcgagatgacagtatctgagttgcagaagaaccctatcaactacacacaggtatgttgttttcctgagcttttactatgctatgggtgcaccttttattatgaaatgctattcattatttgtgaatttgtttctgaattaagtctaaagtttggcaattgaaaactgttttgtagtttcttatattgtcagtgaattttgctctcgaattttgaattttgcaagagaagcattcctaatgtaaaaggaattctgtcatgtcacattggacttctgatttggaacacatttcaatttgtcaatgactaatctctgttattatagccaaaatatatatactgatttatcaatctaaaattttaccaaatcagactcacttcagcccactccgactgtaccttccattcctttttctccatactttctcctgttgctggcaagctggggctaagacttgttacagaaaatcactctttgagatactcgaatgagacatagacatgattgatcatcaaatgatgtgttcctcttgtgttttaatagtaacactagttagggactaggaataaggcaatgatgttggagctattgcaagcaatgaggcaggggaagggagcctggtgccatcttgggaggctccctgtttcaatatttccttaagccagccaccactacctgggttctctaaggctgtcacctgtcctgtcctgctgatgtgtccacctgtgccactgaatcacagctgctatgttgggggctgacacagctgccatattggatctgacttggttttgctggccctagttggtggggaaaaaggtctgataaggggatggagcatcaacctgtgctgaaaaagtgggaggagggtacggtagtcaagttgcatggctagtcatggaccaattgacaagtcagccacagagcacgacttgagggctacaatttgatttgggaaacttggaatacgagataagaggagagctgttcagttttctcctccatatatgattagaggtagccaccggagtctgagtaagattagagggagcaccaatagttgcacacctgctttcctcatctgctccctgttttttctgacctcacttctaatgtaccaactcaaaggcttgtctttgactaagtcatgattagtcctcaagttggtttaggtcttgagggatgactagactgactgtgcgactaacaaccatggctgaagaatagcacatcggcatggagaaatgtgaaatatagtgatggatctcattgctgtaggataaggaatggcactggtggtggcgcaaagttgtgcagttagcagaattagtttcagctgtgttaattacgttgcagcagaagttcacggatgtggtatatttcaatgaaacaagagaggattatggtactagatgatgtgtgagaagaaagtgttttttagatttaagcttctagttatgctgtaggttgaaatatctcattttcctttgcaaagaaagatgatctggatcatattcatcttttgttatgtgtgcacgcattgcaatatatcatagcagctggtatgatttgaacaaaatttgctaacaaaccctgaactgtaaaaagtcttatgttgtctgacttccttgaaatgtcttcagggaagtttttgttcagtcgattattatttggtggctaaagcagatttcaaaaacctaatgtgcctattggattgaatagatctccactgttttctttgatgatgtttcagattgctgtgctggcagatgatatcttgaaaaatgttgagtatgatgctctaagggttgtttttaacaagttccactcggtcatatcattcaagcccacaatgacaaccatactttccccagaggtaaatatcggtgctgaggacatgaatttgtgctcctataaagtaatatgaatgatgtgacgttaatactagtggtttgaattgttttataggttatggagaaagaatcggaatctggtaaggttggtgacctggattcatatgaaattgaaggaggtgaaactaaatcagaaattcttcagaatcttaccgagttccagttttcttgtgtaagtttgtcttcattaatcatatatacctctcaatagatgaattagctacaactattacagccacaaaatcaagtcgcatccataagggtaaacgttccctttgtagagagcgcaatcattcttttttcaaggtatcctagtggtatcttatgtttttgctttgtggcaggttatgtataatgctgctctagagaatgcatgcagtgagcttggagcacgtatgtctgccatggacagctccagcagaaacgctggtgaaatgcttgatcgactcaccctcacatacaacaggtatggtcgtcttaccttctccatctgtttatgtgtgtcgactgcataacggtcggaaatggtcggaaacggtatcattattttattattttctcgaaacgaacggaaacggtcgggaaatttccatatttatgaatttatctatttagtgtcaacttcaatgccacgccgacataaattaaaaaaactaaattttgaatacggtaaccatcggttaaaatattattattatattagttttgcggaaatggtatcggtacggtcgggaaatttccataccgttttcacccctattcacatgaaagaactgatacattcgatttcatccccgcaggacacgtcaagcatctatcactacagagctcattgagattatctctggcgcttctgcccttgagggataatgatgaaacttttgcccatctttttttgttttgctgttcgaaaaaagttcacttgtcatatggagcagcctttccctcgagtggatcctcatgctaagttgcaataattagcccagttacgtgacggtgctatgcatatatcagaaatgcttgttccagtcatccttgtttatctgaatggcgacgtattttaaacaatcttttacagctgtgttcattttgcataaatgattgatcactgttctgcgttgaatttatctagagctttctcttttcttttttttttttgtgtccgcaaccattcatcggtatatcccgctcattacacaaattcacttatctatctgtttggtcagactgaatcgatttgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0320400, RefSeq:Os10g0320400