Os10g0322250

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Revision as of 08:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0322250| Description = HAT dimerisation domain containing protein| Version = NM_001189146.1 GI:297727422 GeneID:9271085| Length = 4299 bp| ...")
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Gene Name

Os10g0322250

Description

HAT dimerisation domain containing protein

Version

NM_001189146.1 GI:297727422 GeneID:9271085

Length

4299 bp

Definition

Oryza sativa Japonica Group Os10g0322250, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:9029752..9034050

Sequence Coding Region

9029752..9030067,9030145..9030354,9030441..9030749,9030931..9031053,9031134..9031208
,9031303..9031393,9031481..9031572,9032796..9032856,9032978..9032996
,9033829..9034050

Expression

GEO Profiles:Os10g0322250

Genome Context

<gbrowseImage1> name=NC_008403:9029752..9034050 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:9029752..9034050 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgtctgatgagtggaaaaatagtgagtggagggaagaagaggaccatgcgttcacatatgattgtttgacaaacagaaggtggtggagggacatggaattggtgttgacagctgtcaaaccaatctatattgtacttcgctttgctgatcaacaaagaaatgcaacgatttctggatttcttccaaagatgatttcagtcttaggtgacatacgtgctaatttatgtcaaaagcaaaatcttcgtgatagggtactacaagtagtcaacaagaggcttcgttatcttctcaacgaaactcttattactgcagctgctgcacttgatccgagagtgctatatacgtcgaacatgggaaggcaacgcaattcaagatttgctgtaacactagccctcaagaagattgcaagatcgtcgttggaggcctctaatgcaattgaacaatttaacttcatcgcaaagagagggttgtttggaggagatgaggctcggcggtcagcacttaatggtcgaatgagtgcagctgagtggtgggattcatatggaggagagcacaaagaactacaaaatcttgcacgccgccttgtttcacaatgcctgtcctccagtggctgtgagcggaactggagcacgtttgctttggtgcataccaaagtgagaaatcggctgggatacgagaagatccataagctggtctacgtgcactacaacttgaagttgcgcattcagcatttccaaaatgacatgcaacttcttgatggtatgcattctgcccaggaaagagaaggagatctgtttagcatcatgatcgatattgctatgtatgatgaaggaaaagcacgtttggaagatgttgaagaagatagcgcagaagattatgtgtcagattctccacgaggtagcccgacttatgctgaatcgggggatagtagttcaagtgatggtgaagctaatgatgatgtcgatgctgttgttgatgttggtagtgaggaggatcatggtgaacctactgctaggggagcacctgttggtgagcaaccagccccactccacccaaaatcaacaaggaaaaggaaagtttctgtcaaggttcttttagacaaaacttctaaaaaaaaaagtgatctaagcctccaaggactatggatagatgtactggaccagaatttgagcatatgcccttcctctattttgcccattggttcttatgcttatataaatctatattgtcagctctccacatgtttctggatcactaacaagaacccaggaagatgtccaatagcatctcagaaaactgacaagatctcacgaactaacacgagaaaatatggtctttatgcactgacttcgggtgttcagcgagcagggcgttgcagtcttgctgagctaccaggtctacttcagtatgaggaagcagtcaaccaacaacgtcggcagcaagcacatgctggaaatgagactgttaatcttattaaatcaaaaaaaatagttcatgttatgccatttatttag</cdnaseq>

Protein Sequence

<aaseq>MVSDEWKNSEWREEEDHAFTYDCLTNRRWWRDMELVLTAVKPIY IVLRFADQQRNATISGFLPKMISVLGDIRANLCQKQNLRDRVLQVVNKRLRYLLNETL ITAAAALDPRVLYTSNMGRQRNSRFAVTLALKKIARSSLEASNAIEQFNFIAKRGLFG GDEARRSALNGRMSAAEWWDSYGGEHKELQNLARRLVSQCLSSSGCERNWSTFALVHT KVRNRLGYEKIHKLVYVHYNLKLRIQHFQNDMQLLDGMHSAQEREGDLFSIMIDIAMY DEGKARLEDVEEDSAEDYVSDSPRGSPTYAESGDSSSSDGEANDDVDAVVDVGSEEDH GEPTARGAPVGEQPAPLHPKSTRKRKVSVKVLLDKTSKKKSDLSLQGLWIDVLDQNLS ICPSSILPIGSYAYINLYCQLSTCFWITNKNPGRCPIASQKTDKISRTNTRKYGLYAL TSGVQRAGRCSLAELPGLLQYEEAVNQQRRQQAHAGNETVNLIKSKKIVHVMPFI</aaseq>

Gene Sequence

<dnaseqindica>1..316#394..603#690..998#1180..1302#1383..1457#1552..1642#1730..1821#3045..3105#3227..3245#4078..4299#atggtgtctgatgagtggaaaaatagtgagtggagggaagaagaggaccatgcgttcacatatgattgtttgacaaacagaaggtggtggagggacatggaattggtgttgacagctgtcaaaccaatctatattgtacttcgctttgctgatcaacaaagaaatgcaacgatttctggatttcttccaaagatgatttcagtcttaggtgacatacgtgctaatttatgtcaaaagcaaaatcttcgtgatagggtactacaagtagtcaacaagaggcttcgttatcttctcaacgaaactcttattactgcaggtaatagttgtaagtgaaaattgttctattcatgttgatttccatgcttaacatattgcatctgtttgctttcctagctgctgcacttgatccgagagtgctatatacgtcgaacatgggaaggcaacgcaattcaagatttgctgtaacactagccctcaagaagattgcaagatcgtcgttggaggcctctaatgcaattgaacaatttaacttcatcgcaaagagagggttgtttggaggagatgaggctcggcggtcagcacttaatggtcgaatgagtgcaggttttaccttgactctggattttcaattatcattgtacttcttttattgctcctctgtttcatacctattccgttgtatattgtagctgagtggtgggattcatatggaggagagcacaaagaactacaaaatcttgcacgccgccttgtttcacaatgcctgtcctccagtggctgtgagcggaactggagcacgtttgctttggtgcataccaaagtgagaaatcggctgggatacgagaagatccataagctggtctacgtgcactacaacttgaagttgcgcattcagcatttccaaaatgacatgcaacttcttgatggtatgcattctgcccaggaaagagaaggagatctgtttagcatcatgatcgatattgctatgtatgatgaaggtaacccaatcatggattggttgtgcaactctaggagtgaatctgtgcccattcttgatgaatttgatgacaatgaacctgaattgtcgagcccaagtagatttctcatagaggagtaatgaagaagtagctcaatttaagaggaagcttcattttgatacaagtgatgctaataagaaaggaaaagcacgtttggaagatgttgaagaagatagcgcagaagattatgtgtcagattctccacgaggtagcccgacttatgctgaatcgggggatagtagttcaagtgatggtgaagctaatggtaagtttgcagtttcaaccgctttcattttaagtgcttcaacatcctgaactttctttccatcttttatcatctcacagatgatgtcgatgctgttgttgatgttggtagtgaggaggatcatggtgaacctactgctaggggagcacctgttggtaatacatgtgtgcttgataaataatgaatcaattgtgtatgtaacatttaaatttaaatgggtaccaataagacttacatcttattttgcaggtgagcaaccagccccactccacccaaaatcaacaaggaaaaggaaagtttctgtcaaggttcttttagacaaaacttctaaaaaaaaaaggtatagctaaacctgacctcatctgtattatataaccatttaaatccaatatagtgactgaatttgagcatatgtcaacatttgtagtgatctaagcctccaaggactatggatagatgtactggaccagaatttgagcatatgcccttcctctattttgcccattggttcttatgcttgtatgtatggttgtatgctgcagtatgggctaatttagagatgttttggggctgtgaccctcttttggcatatgtactgcctgtaatatttcagactccagacttgtgtattttggtagaaactggtgatatttgggactatagactcatttgaatgttatgtcaggatgggccaatttagagatgttatgggctatgtgaccctctcttggcatatatgaccctcttttgacacaatctgtcatgttcaactcaatctaatggactatgcatgcgtgacattgtgttcttgtactgcctatatgatattttgcacttgtactggttatttacatactatatatgttattttctataccaaatgatctagatacaatctacttgatttcatgcacaaattcagccaaattttaataaattttgtccgaactttttttcgtatcgctgataaaattccgatatttccgataatcccgtttatcggtaccctccgatagattttacatattgataagtgaaaccctgactgttgtatcaattgacttgttaaggaagcttggaaaactaagctctgtagttatgcccaaatgacttgttaaggaagcttggaaaactaagctctgtagttatgcccaaatgcttgtagtgcctaatcagcttagatggtcgtgtactgtacttgaacttctataggctgtgagggagtacatctataggcaggcagtcagtcagagtgatagtaaagaatcaggtagaatattttttttcttacataggctgtgagggagtacatctataggcaggcagtcagtcagagtgatagtaaagaatcaggtagaatattttttttcttacagttcaccatcctaaactttaaagggcatgtgcagtgaaataagtttactagctttctgttccccggcttagcccttacatagttacattgttgattaagctaaaatttttggcagtaggctcaagctcagagctccaaacagtccaggtttttctcattgccatccccgatcataaatatgcatgtcacccttttgcagttcctcatctttctctcaacgaatcagttgcaaatcatgtattgacctttgataagtttgcagattcgtaacgccattctctcatgatccatctgaatctttcttgcagagtcctctaattctttaggcatgctgccttttctttttgtttggtattgtactatgcagatataaatctatattgtcagctctccacatgtttctggatcactaacaagaacccaggaaggtaagtagaatatgaaagtggtccaagtaattatgatagcaatcaagtcagatgctgattaaatcaattgttcggcaggaattatcaagtcaccttggtgctttgcattgtcaaatggcagatgtccaatagcatctcaggtaaatagctccgcttcttatattaataacttgagctgtatatcgaattatctactctcattggataaataatgcagcaaatatgcatatatgtctacatttttctattcggtgctgtattcagtagtggtttggtggcatatgatcttaaaaggcccccttcttcacacacacacacacacacacacacgaattgagcaacacatacgccaacgttacatgcatgtccttcagttattggatcaaccacaggaaggttaagaatattgaccatataagaggaatttcacttaagttctaatagaatatctgaatcacatcgtaattcataaggaatctcgattaagttctaattaactttggtacatcatgttgcctgactcactacataatatttggagtgctaatgccaattcatatagtgctctgctatcactatttcagtagtgcatatactgttaatcaaaataatttcattttgtaacttgtatatatatatatatatctacatgaggactttgcaaagcaacatctcaggggcctacaatgagttgttgctcggtaagaagttttagtatcaaaattcataatatgcgcgctacaggtccaaagtactgtccttgctagattcagttccaaaatgagacagttctcaccaggataacaggtgacagaaaactttgtcgtggttccatagcagttgcgtgtggaggggcagcagcttatgaagccacgtcttgtttcatcagaggtaatattgagctaaagatgataaatttagaaacttcagaagatggcatgaactgaacttactgacaaatgcttaattcagaaaactgacaagatctcacgaactaacacgagaaaatatggtctttatgcactgacttcgggtgttcagcgagcagggcgttgcagtcttgctgagctaccaggtctacttcagtatgaggaagcagtcaaccaacaacgtcggcagcaagcacatgctggaaatgagactgttaatcttattaaatcaaaaaaaatagttcatgttatgccatttatttag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0322250, RefSeq:Os10g0322250