Os10g0323500

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Revision as of 08:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0323500| Description = Similar to Beta-glucosidase| Version = NM_001070882.1 GI:115481507 GeneID:4348315| Length = 5906 bp| Definition = O...")
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Gene Name

Os10g0323500

Description

Similar to Beta-glucosidase

Version

NM_001070882.1 GI:115481507 GeneID:4348315

Length

5906 bp

Definition

Oryza sativa Japonica Group Os10g0323500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:9117624..9123529

Sequence Coding Region

9117664..9117819,9119770..9119836,9120392..9120450,9120562..9120637,9120825..9120896
,9121033..9121120,9121196..9121451,9121641..9121756,9121954..9122177
,9122392..9122423,9122589..9122690,9122887..9122996,9123090..9123264

Expression

GEO Profiles:Os10g0323500

Genome Context

<gbrowseImage1> name=NC_008403:9117624..9123529 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:9117624..9123529 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaatggagggcgatgcatggtggaggtggtgatacttcttgtgttgatggctatgtcgcaaggatgcgatgcgcagaatactaccggaggactgacgagaaagagcttccctaatggcttcgtctttggaaccgcttcatcggcttatcagtatgaaggtgctgtcaaggaggacggaagggggccaaccatttgggacaaattcgcacatacatttggaaagatcattgacttcagcaatgctgatgttgcagtggatcagtaccaccgtttcgaggaagatattcagcttatggcagacatggggatggatgcatatagattctcaatttcatggtctaggattttcccaaatggcactggtgaggtcaaccaggcaggcattgatcactacaacaagctaatcaacgcattactagctaaaggaattgaaccatatgtaacgctctatcactgggaccttccacaagctttggaggacaagtacactgggtggcttgacaggcagatcatcaatgattatgcggtatatgctgagacgtgcttccaggcatttggggacagggtgaagcactggatcaccttcaacgagccccacaccgtcgcggtgcaggcctatgacagcgggatgcatgcaccgggccgctgctcggtgctcctgcacctctactgcaagaaagggaattcaggcaccgagccctacatagttgctcataacatgatcctctcacatgccacggtttcagacatatacaggaagaaatacaaggcaagtcagaatggggagctggggatatcttttgatgttatatggtacgaaccaatgtcaaattccacagctgacattgaagccgccaagagagcacaggaattccagctaggatggtttgcggatcccttcttcttcggagattatccggcaacgatgagatcgagagtgggaagcaggctaccgaagttcacggagaaagaggctgcacttgtgaacggatcactggacttcatggggatcaatcactataccacattctacacaaaggatgaccaatctactgtaatagaaaaattgctgaacaacaccttggcagatactgcaaccatcagtgtccccttcagaaatggacagccaattggggatagggccaactcgatatggttgtacatcgtgcctcgtagcatgaggatcttgatgaactatgtcaaggacagatacaacaaaccaactgtctacataacagagaatggaatggatgatggcaacagccccttcatctctctgaagaatgccctcaaggacgacaagaggaccaaataccacaatgactatcttacaaacttagcagactccataagggaggatggttgtgatgttcgcgggtattttgcatggtctcttcttgacaactgggagtgggccgctggatacacctcgagattcggattatactacgtagactacaagaaccggaagagatacccaaagaattcagtgcagtggttcaagaatctcttggcatcctcctcttga</cdnaseq>

Protein Sequence

<aaseq>MGNGGRCMVEVVILLVLMAMSQGCDAQNTTGGLTRKSFPNGFVF GTASSAYQYEGAVKEDGRGPTIWDKFAHTFGKIIDFSNADVAVDQYHRFEEDIQLMAD MGMDAYRFSISWSRIFPNGTGEVNQAGIDHYNKLINALLAKGIEPYVTLYHWDLPQAL EDKYTGWLDRQIINDYAVYAETCFQAFGDRVKHWITFNEPHTVAVQAYDSGMHAPGRC SVLLHLYCKKGNSGTEPYIVAHNMILSHATVSDIYRKKYKASQNGELGISFDVIWYEP MSNSTADIEAAKRAQEFQLGWFADPFFFGDYPATMRSRVGSRLPKFTEKEAALVNGSL DFMGINHYTTFYTKDDQSTVIEKLLNNTLADTATISVPFRNGQPIGDRANSIWLYIVP RSMRILMNYVKDRYNKPTVYITENGMDDGNSPFISLKNALKDDKRTKYHNDYLTNLAD SIREDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYYVDYKNRKRYPKNSVQWFKNLLAS SS</aaseq>

Gene Sequence

<dnaseqindica>41..196#2147..2213#2769..2827#2939..3014#3202..3273#3410..3497#3573..3828#4018..4133#4331..4554#4769..4800#4966..5067#5264..5373#5467..5641#tatttctccctctctccctctctttgtaacacaaaccaagatggggaatggagggcgatgcatggtggaggtggtgatacttcttgtgttgatggctatgtcgcaaggatgcgatgcgcagaatactaccggaggactgacgagaaagagcttccctaatggcttcgtctttggaaccgcttcatcggcttatcaggtttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcgactttgacacgtcatgatggtcttgggagaggtcattctctcatatactccctccatccaaaagttggcaaatgaaaaaaatcctggtacacggcaaatgaaaaacaatgtccagacaacggagttttttttaactaaaatatctctaaaaattaattagatcatactataataatattgttatgctggagaatcttgcattggctctgcccttggttcctggatgatcagttagcgcacagtttttttactagaacatatgatattttgtttctttttggagaccactagaatagaaggggtgatctatctgattaatttgtccatatatcatggtacatgagaaagagatttgaatatattttccatggcacctctgcaattgaactgttgcttcacatgcttttgagacgatatctagttggagagaacttggaaaagagtctgagctaaacaagaataaggcaaaagaacaagtggtagtgccttgctcccgtgatattaggatatgtgctttgtctttgtcatcaccgactctctcttcaatgcccttcttttgcttggaagtcatatggcagtttttaattagcagcagataaaaacggatatcaatattatgttaagcaccggccatgtataatcatctcaatgccaaaaaatccccccaaaaaaatctcaatgccaaaaaaaaagtcttctccttcatcgctttctttgcatatttataaggatggtgaaagcaatggacagattaataagccaggatgtacatgccctaattaattacaccaataatagaaaaatcataaattgatcataattgtgaatacacaggcatatataaactatttgctattaatattttttggataatgatcattgctatatatggctaacggttttgcaaaccagtatatacctaattaagtttggtaaaaacaaaaaagaaaaacatgcaaacaggataatcttaaagtgttgtaatggtccctgatacaatactaggagatattttggacatttaccttatttggaaaatctacaaatacaaaaaaaattgctgcaaacttcttacaaaatactggtggcaaattattattattgcaccttcaaattctataaactttcaactaaataaatcaaatggttgaggactaaatttccaactaatccaagctatatttaactaaatttcccatttcttcttcttcccatcttcttccccaaagtccaagcttccaccacagcagcactacgactatatttccctttattccagatgacacaaaatacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaatctagataaatatatatgtctagattcattaacattaatataaatgtggaaaatgctagaatgacctacattgtgaaacagatggagtaattatcttcgagtgtgtgttaggggtgtatttgtggtatgcattgtgagttttccgtctaatctccaaaagaaaaatgcagccaatgaagcgtgttctatgtttcctttttgcatgaactgtaaagtaactgttcaggtttgtgccctcctattttacatccttatattcttcatctttacctaagctatgttagaaaaatctctcctaaaaaagttgtgcgtgtatcctgtttcaagtgtatatctattacaccaatcgattggcaccgctcgctagaatgcttattttggctacacaaaagtactgatcataaataagtaaaacagttgaattcagtaatatccacgtttcaatttgactattaagatgattaatatttgtttcatattcacgcaaaaaaaatatttgtttcatatttatctatttttcctgcagtatgaaggtgctgtcaaggaggacggaagggggccaaccatttgggacaaattcgcacatacatttggtatcttttttcccaatcactgtaatcagtatttaatcatctctagtttcctcagggccaagtcaagcaggataaagattcagtaattatatttttaggtttgtaattctggtcgagaaacatacgtaatatatgtagtggtatacgactcaagatgcctatggattcttgatatatatctggctatccttgccttaccttgtttcttctactatcttagtactactgttactatcaatagttatgcctgcttcacgtatggaacaagcatctctcgactctcatgttgtataatttataggtcagatattcaaaacctgtatgcaattatgctaccacagattagatatttttctttgtcattacacttaatctcagtgttcctgattcgtacattctgggcatgtgtgaaaccatatagtaaatagctttgactattgacttggtcgaacatatggaataacaaagaaatcattaagagttgacctttgatcatgaaaattaatcacccatggttcaatattataagcaaatatttgccttacttattttcaggaaagatcattgacttcagcaatgctgatgttgcagtggatcagtaccaccgtttcgaggtagacaattggacactacactctaacacagaaagtgaaagtatatctatctattttttttgatcgagttcaaattttgagattactgtgcttgtcatatcaatatttcaggaagatattcagcttatggcagacatggggatggatgcatatagattctcaatttcatggtctaggattttcccaagtatgtaatataataattcattggttaatatgggtatttccacttgtatctcttcattattttgcatctttatgttaacttaatggtcacacataacctttgaagtttttcttcattatgaaatgttttatctgtggataaacagacctgcactactaacaataatcatatctgcactcttattcagatggcactggtgaggtcaaccaggcaggcattgatcactacaacaagctaatcaacgcattactagctaaaggtggacactaaaattgactccccaaaacctacaaattgaaatgtttgagctaactacttattaaaacataggtttaattcactactgaatctaaagttttcttaaattttactgacaagttgaacatctcccctaggaattgaaccatatgtaacgctctatcactgggaccttccacaagctttggaggacaagtacactgggtggcttgacaggcagatcatgtaagcattgcaaacttctcatgcagttacaatggctattcgatctgtaacagaagtaccatgatcttgttgcagcaatgattatgcggtatatgctgagacgtgcttccaggcatttggggacagggtgaagcactggatcaccttcaacgagccccacaccgtcgcggtgcaggcctatgacagcgggatgcatgcaccgggccgctgctcggtgctcctgcacctctactgcaagaaagggaattcaggcaccgagccctacatagttgctcataacatgatcctctcacatgccacggtttcagacatatacaggaagaaatacaaggtaggtgaacaattcttctgcatatagttcaggcttctgtaactgtaagcatgatgtatgtgctgctttgatattgcaatgctttctcaagtcaatcctgcatgaagatttgtccatagatcattttcagtgttcagtacgtaattcggtaacacaatgatgcaaaggtaaagctttcatgtttttcaggcaagtcagaatggggagctggggatatcttttgatgttatatggtacgaaccaatgtcaaattccacagctgacattgaagccgccaagagagcacaggaattccagctaggatggtaaggttcacaactcacaagcttcatattttcttgcaaattccacagctgtgagacattcagtaccactactgtgacaaaatggacagaaccattgcactctgttctgtaactactgtagtttttcctttgtactcaaccctgtactgaattttgatagaaccaccattgatgaaatgctcaatttggtatggaaggtttgcggatcccttcttcttcggagattatccggcaacgatgagatcgagagtgggaagcaggctaccgaagttcacggagaaagaggctgcacttgtgaacggatcactggacttcatggggatcaatcactataccacattctacacaaaggatgaccaatctactgtaatagaaaaattgctgaacaacaccttggcagatactgcaaccatcagtgtccgtaagttccacttttcattcacactgttttctgaataataagagaactaaatgataaaaagcacaaagcacacaactgggctaactacttctcagattgcttgtgctatgagaaaactagtcgcccattgtgttctttttgcaagtttggatgattaaatttgaaaaattagctagctcatgactaattcatttctcatgcctgcatttttcagccttcagaaatggacagccaattggggatagggtaattaattctgcaacattacatccttctcatgtgaaaataaaattgacattaatatttttttcttttgttgttaatttactgcaagatttgaaaaccttgatttgtaaaactgaacttggtttctgaactgactgagcatatgactgttgattcgccatgcaggccaactcgatatggttgtacatcgtgcctcgtagcatgaggatcttgatgaactatgtcaaggacagatacaacaaaccaactgtctacataacagagaatggcaagtgtacttacgttatttgtgatttgttcctgtatgcttaaaacaaatactacagtaataaaaaatgtcaaacataaaaattgcttcaagtttaacataacaaagtataatctttcgaataaaattttcattgaagtttcctcgcaagaacaaaaactcaagtaatataatagattcccttcttttgcctcaggaatggatgatggcaacagccccttcatctctctgaagaatgccctcaaggacgacaagaggaccaaataccacaatgactatcttacaaacttagcagactccataaggtgcttaaacaatgacacaattgaactttcggttatgagtcgaggactaattttccctgttatggttgacactctaataactttattatgcagggaggatggttgtgatgttcgcgggtattttgcatggtctcttcttgacaactgggagtgggccgctggatacacctcgagattcggattatactacgtagactacaagaaccggaagagatacccaaagaattcagtgcagtggttcaagaatctcttggcatcctcctcttgatcaaattgagtcgcctatatatcaagatgccttgatcattgctaccctactactacctagttgtgatttatacacgcaggattgcataccgagcagtgaccattcatgtattcattgattgtataaagagatatcatgcatggacttgttgtacataattcataatattcttgcaccaaaaactgaataaacacagattgtaataataaaatagatacattttgatgctacaagaaaaaggcgcacatttggtctgattttcccc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0323500, RefSeq:Os10g0323500