Os10g0340600

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Revision as of 08:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0340600| Description = Glycoside hydrolase, family 35 protein| Version = NM_001189164.1 GI:297727458 GeneID:9266387| Length = 5314 bp| Def...")
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Gene Name

Os10g0340600

Description

Glycoside hydrolase, family 35 protein

Version

NM_001189164.1 GI:297727458 GeneID:9266387

Length

5314 bp

Definition

Oryza sativa Japonica Group Os10g0340600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:10269034..10274347

Sequence Coding Region

10273124..10273279,10273900..10273995,10274138..10274317

Expression

GEO Profiles:Os10g0340600

Genome Context

<gbrowseImage1> name=NC_008403:10269034..10274347 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:10269034..10274347 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaaaggcaatgtgcagcttgggcgcctgcctggcggtgatgctggtcgtcctcgcggcggcggtcgccggcgtcggctgcagcatcgtctcctacgacggccggagcctcatcctcgacggcgagcgccgcatcgtcatctctggctccattcactaccccaggagcacccccgagatgtggcccgatttgatcaagaaggccaaggaaggcggcctcaatgctatcgagacatatgtgttctggaatggccatgagccgcgccgtcgtgagttcaactttgaggggaactacgatgtcgttaggttcttcaaggagatccaaaacgccggaatgtacgctattcttcgtatcggcccatacatctgtggtgaatggaactacgggtacatgcctatgctctatttggacacgatcgtgtgcttgtga</cdnaseq>

Protein Sequence

<aaseq>MAKAMCSLGACLAVMLVVLAAAVAGVGCSIVSYDGRSLILDGER RIVISGSIHYPRSTPEMWPDLIKKAKEGGLNAIETYVFWNGHEPRRREFNFEGNYDVV RFFKEIQNAGMYAILRIGPYICGEWNYGYMPMLYLDTIVCL</aaseq>

Gene Sequence

<dnaseqindica>1069..1224#353..448#31..210#ataagctagcggctgctctgcatatacgccatggcaaaggcaatgtgcagcttgggcgcctgcctggcggtgatgctggtcgtcctcgcggcggcggtcgccggcgtcggctgcagcatcgtctcctacgacggccggagcctcatcctcgacggcgagcgccgcatcgtcatctctggctccattcactaccccaggagcacccccgaggtcatttcttggtcattgcatatattgtataatatatatctatctatccatcacgcaatgcgatctttgattgatcgttgttatgatttggagatgctaatttggaatttgaatctgcgatctttgttccatccttgtgcagatgtggcccgatttgatcaagaaggccaaggaaggcggcctcaatgctatcgagacatatgtgttctggaatggccatgagccgcgccgtcgtgaggttagttcgtttgcagaaagacgaagctttttatgcttcttttactcctgatgatggacaatagatgcaggacgctacatgttaatttctagtttacaattcgttgttgtttcaatgtagatttgtactgctcatcagtttcttaatttaatggtcaattgtgcacagattcgtattacgtttgcttagcttaattccaaaccatatgtttggcatgcattcacagtcccagatgtattttgcagccttataattagcatggtggtttgaactaatacgatttcctctttcttattacctcaactctcgatgatttatggttttttctaactagcatgtgtagattatacatagtcgctccatcaggccattatgacttttttttttggttattgtgagaaaacatctgtcgttttttatttaatatcacaattcaaagaagacgtactattcttagacctaagaaaggggattctaggaaagccttcagttaataacataaaagtgaatcaccaccttgcataatgcatatgcatatacgacatccgcatatgtataaccacgtaggtgttctgctactattatattattgcttaagccataattctctcgatctgcagttcaactttgaggggaactacgatgtcgttaggttcttcaaggagatccaaaacgccggaatgtacgctattcttcgtatcggcccatacatctgtggtgaatggaactacgggtacatgcctatgctctatttggacacgatcgtgtgcttgtgaaactgaaaactatttagctagcaaaaatcaaatattgctagtcattatttattctaatcatttttctgatatgtagaggtcttcccgtttggttgcgtgatatccctggaataaagtttaggctgcataacaagccttttgaggtaatggacaacaagaacaaatttaattcacagtgaataattcatagatctttacatcaagaagaattatgagcaattgtggtgtttccattaaacagaatggaatggaggccttcactacacttatagttaagaagatgaaggatgcaaacatgttcgcggggcaaggaggcccaatcatccttgctcaggtactgtactacaattcagaattttggggccaatatgacccgattttaccatttgaatccctaactgtgctctctaatgcaaataccaatgcatgtttggatctttacatatagattgagaatgagtatggttataccatgttgcaaccggaaaatatccagtctgcgcacgaatacatccactggtgtgcggacatggcaaataagcagaatgttggggtcccatggatcatgtgccagcaagacaatgatgtgccaccgaatgtggtaagcaagagattcaattcgattgcaattcaaaatattctatatttaagtttattattgcattgtttggttgaatgaaatgcatgtcatcatttttctgacaaatttaggtcaacacctgtaatggattctattgccatgagtggttttcaaacaggacaagcatccctaaaatgtggacagagaactggactggctggtaatataaaattttcttccatcattaatacatgtgtttttttaatttacagaataattttctgctgtggtatggattaatgtgtatgttaaatttgtaataatatatatgtcattaggtacagagattgggatcagcccgaatttcgtaggcctactgaagacattgcttttgcagttgcgatgttcttccagatgcgtggttcactacagaactactacatggtatgctgccctttagattcttgttgcttattccctgatgaataaaaattaaactttccatttccattttatcgcagtaccatggtggtaccaactttggccgcactgcaggaggcccatatattacaacaagctatgattatgatgctcccttggatgagtatggtgggtccatttcacacaagatatatctagcaatttattttatctatatacgatatgatgagcactgcactaattttgcgatcttgttctgatctttcaaatcgcctgccttttgatcactaggtaatcttaggcagcctaaatatggccacttgaaggagctccactctgtgctcatgtctatggagaagattcttctccatggagattacattgacaccaattacggtgataatgtcacggtgagatccatatcatgccattcttttgtatttgaaatgttatcaaacttcgtatcacgagtcttgaacctatgcgcctgcagggccagtaatgtaacacaacatattctctatattgtggaagttgaagttaaatttcatcaagtttaaaatatgttttaatgttaatgcatgaatggctttaacccaaagtaaaagcatttatcatatttatgataattccaagctagaataccttattcttgggaaattcacacaattagtctgatgccacgacactataatttgggcattgcaggtcaccaagtacaccttaaatgccacctctgcttgtttcatcaacaaccggtttgatgatagggatgtcaatgttactcttgatggaaccactcacttcttgcctgcttggtctgttagcatcttaccgaattgcaagactgttgcctttaatagcgcaaaggtattttttcctcttaccgttgaataaattaatttgatcattttagacctcatgacctacaatataactgaatttctattgtaaattatttgtcaattctgacctatttttttcctgctctaaccttggtaccattagatcaagacgcagacgactgtgatggtaaacaagacaagcatggtggagcagcaaacagagcacttcaaatggtcatggatgccagagaacttgaggcccttcatgaccgatgaaaagggcaactttagaaagaatgagcttttggagcagatcgtgacgacaaccgaccagagcgattatttgtggtatagaacaaggtactagcccaaaaaataattctatcaaaatttatgtattgaaaatttagtacattagtgtaatttatcaagtgtgctgctgaattctaaacgtcgatcaaattcagccttgaacacaagggggaggggagctacgtgctatacgtgaacacaactggccatgaactctacgcatttgtgaatggaaagcttgtcggtaagtaatgagttaaatttggttccatgtaaaaaatatgatttctagttgcaatcttcttcttgaatggtccaaactattcattgcaccaacgtttttttctaaaattaatgttgtgctcgtcaggtcaacaatattctcccaatgagaattttaccttccaactcaagtcaccggtaaagcttcatgatggcaagaactatatttctcttctgagcgggacagttggtctaagggttaatattctcttttcttactaagctcatcagacaattcgagcaataccctcatctctttctttgcaaccgtgtgtgatgaaaatatatttatttcattcttgtcaaacagaactatggtggctcatttgagctgcttcctgctggaattgttggaggcccagttaaacttattgacagcagtggttctgcgattgatctctccaacaactcctggtcttacaaggtgaagaacatttttatccattgctaattatttgtcgagctgtgctggtattgatggtcactttgatttttgattttctaggctggtttggctggtgagtacaggaagatctatcttgacaagccaggcaacaaatggcgcagccataacagcaccattcctatcaacaggcccttcacctggtacaaggtactattaataatcaatatgcacattatttactaatatggtgtgtactatgctattgggtatagctaatactctgtttttgatatatatatatttttgtagaccacgttccaagcccctgccggcgaagactctgtggtggtggacctccatgggctaaacaagggtgtggcatgggtgaatggaaacagcctcggacgctactggccatcgtacgttgcagcagacatgcccggctgccaccactgcgactaccgtggcgtgttcaaggcagaggttgaagcccaaaagtgcctcacgggttgcggagaaccctcgcaacagctctaccatgtgccacgctccttcctcaacaaaggggagcccaacacactcatcctcttcgaggaagccggcggcgacccgtcggaggtggcggtccgcaccgtggtggagggttccgtgtgtgcgtctgccgaggttggtgacactgtcacgctgtcgtgtggcgcgcatggcaggaccatttcgagtgttgatgtggctagcttcggtgtggcacgtggccggtgcggatcctacgacggcgggtgcgagtcgaaggtggcttatgacgcatttgcggccgcgtgcgttgggaaggagtcgtgcacggtgcttgtcaccgatgcgtttgccaatgctggttgtgtctctggtgtgctcactgtccaggccacttgctgagaaaaatcagtgaattgaccacgtcctggatagttgctcaataggttggtttgtttaggataataagctataggttaacattctttttggtatcagatcgtggaagacttttttccttcattttactttttatgttgattttatgagataccgcactgtcgattcaatcaattaaactttataaaatccgcaatgaaaggctttgtccatcttcacgttatagaaacaatttattaacctgattaagcagtattgtcaccaggaaaatcagattaagttgcacagtgatcaattgaaaattttattttgtct</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0340600, RefSeq:Os10g0340600