Os10g0341700

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Revision as of 08:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0341700| Description = Cellulose synthase-like H1| Version = NM_001070919.1 GI:115481581 GeneID:4348359| Length = 5524 bp| Definition = Or...")
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Gene Name

Os10g0341700

Description

Cellulose synthase-like H1

Version

NM_001070919.1 GI:115481581 GeneID:4348359

Length

5524 bp

Definition

Oryza sativa Japonica Group Os10g0341700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:10346575..10352098

Sequence Coding Region

10346621..10346880,10346985..10347312,10349019..10349144,10349304..10349423,10349706..10349918
,10350009..10350120,10350389..10350573,10350666..10351016,10351182..10351739

Expression

GEO Profiles:Os10g0341700

Genome Context

<gbrowseImage1> name=NC_008403:10346575..10352098 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:10346575..10352098 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcggcggctagaggcaacaagaagctgcaggagagggtgcccatccggcgcaccgcgtggaggctcgccgacctcgccatcctcttcctcctcctcgccctcctcctccaccgcgtcctccacgacagcggcgcgccatggcggcgcgccgcgctcgcctgcgaggcgtggttcaccttcatgtggctgctcaacgtgaacgccaagtggagccccgtccgtttcgacacgttcccggagaacctcgccgaaaggatcgacgagctcccggcggtggacatgttcgtgacgacggcggacccggtgctggagccgccgctggtgaccgtgaacacggtgctgtcgctgctcgccctcgactacccggccgccggcgagaagctggcgtgctacgtctccgacgacgggtgctcgccgctgacgtgctacgcgctgcgggaggccgcccggttcgccaggacgtgggtgcccttctgccggcggcacggcgtcgccgtcagggcgcccttccggtacttctcctccacgccggagttcggcccggcggatggcaagttcttggaggactggacattcatgaagagcgagtatgagaagttggtccaccggatcgaggacgccgatgagccttcccttctgcggcacggcggtggtgagttcgcagagtttctggatgttgagagggggaaccaccctactatcataaaggttctgtgggataacaacaggagcaggacaggagatggcttccctcgtctgatatacgtctcaagggagaagagccccaacctacaccatcactacaaggctggcgccatgaatgccctgacaagggtgtcagcactgatgaccaacgccccattcatgctaaacctagactgcgacatgtttgtaaacaacccccgggtcgtcctccatgccatgtgccttctgttaggttttgacgatgagatcagctgcgcgtttgttcagacgccgcagaaattctacggtgccttgaaggatgatcctttcgggaaccagctggaagttagtttgatgaaagttggacgtgggattgcagggcttcagggcatattttattgtggaacaggctgctttcaccgcagaaaagtcatttacggcatgaggacagggcgagaaggcaccacaggttattcatctaacaaggagctccatagtaaattcggaagttcaaataattttaaggaatcagccagggatgtcatttatgggaacttgtcaacagagccaatagtagatatatcaagttgcgttgatgttgccaaagaagtagctgcctgcaactacgagattggcacatgttggggtcaggaggttggttgggtctatggatcactgacagaagacgtgttgaccggacaacggatccatgcagcgggttggagatccacgctgatggaaatcgaaccaccagcattcatgggttgtgcaccaaatggagggcccgcctgcctaacccagttgaagagatgggcatcaggttttttagaaatactcatcagtcggaataacccaatcctcacaaccacatttaagagtctccaattccgacaatgccttgcatacctgcacagctatgtgtggcctgtgagggcacctttcgaattgtgctatgcattgttggggccttattgcttactatcaaaccaatccttcttgccaaagacatcagaagacggtttctacatcgcattagctctattcattgcctataacacatacatgttcatggagttcatagagtgtgggcagtctgcacgtgcatgttggaacaaccacaggatgcaacggatcacctcagcttctgcttggctactggcatttcttaccgtcatcctcaagaccttaggcttctccgagactgtgttcgaggtcacccgcaaagacaagagcacatcagatggtgattccaacaccgatgagcctgagccagggaggttcaccttcgacgaatcgacggtgttcattcccgtgacagcacttgcaatgttaagtgtcattgcaatcgctgtaggagcatggagggtggttttggtgacaacggaaggcttgcccggtggccctggtatcagtgaattcatctcctgtgggtggctggtgctgtgcttcatgccattgctgagaggtctagtgggaagtggtcgatatggcattccttggagtatcaagatgaaggcctgcttgcttgttgctatattcttgctcttctgcaaaagaaattaa</cdnaseq>

Protein Sequence

<aaseq>MEAAARGNKKLQERVPIRRTAWRLADLAILFLLLALLLHRVLHD SGAPWRRAALACEAWFTFMWLLNVNAKWSPVRFDTFPENLAERIDELPAVDMFVTTAD PVLEPPLVTVNTVLSLLALDYPAAGEKLACYVSDDGCSPLTCYALREAARFARTWVPF CRRHGVAVRAPFRYFSSTPEFGPADGKFLEDWTFMKSEYEKLVHRIEDADEPSLLRHG GGEFAEFLDVERGNHPTIIKVLWDNNRSRTGDGFPRLIYVSREKSPNLHHHYKAGAMN ALTRVSALMTNAPFMLNLDCDMFVNNPRVVLHAMCLLLGFDDEISCAFVQTPQKFYGA LKDDPFGNQLEVSLMKVGRGIAGLQGIFYCGTGCFHRRKVIYGMRTGREGTTGYSSNK ELHSKFGSSNNFKESARDVIYGNLSTEPIVDISSCVDVAKEVAACNYEIGTCWGQEVG WVYGSLTEDVLTGQRIHAAGWRSTLMEIEPPAFMGCAPNGGPACLTQLKRWASGFLEI LISRNNPILTTTFKSLQFRQCLAYLHSYVWPVRAPFELCYALLGPYCLLSNQSFLPKT SEDGFYIALALFIAYNTYMFMEFIECGQSARACWNNHRMQRITSASAWLLAFLTVILK TLGFSETVFEVTRKDKSTSDGDSNTDEPEPGRFTFDESTVFIPVTALAMLSVIAIAVG AWRVVLVTTEGLPGGPGISEFISCGWLVLCFMPLLRGLVGSGRYGIPWSIKMKACLLV AIFLLFCKRN</aaseq>

Gene Sequence

<dnaseqindica>47..306#411..738#2445..2570#2730..2849#3132..3344#3435..3546#3815..3999#4092..4442#4608..5165#agagagcgataaaactgtgggggcaagtgctctggcgccggcaataatggaggcggcggctagaggcaacaagaagctgcaggagagggtgcccatccggcgcaccgcgtggaggctcgccgacctcgccatcctcttcctcctcctcgccctcctcctccaccgcgtcctccacgacagcggcgcgccatggcggcgcgccgcgctcgcctgcgaggcgtggttcaccttcatgtggctgctcaacgtgaacgccaagtggagccccgtccgtttcgacacgttcccggagaacctcgccgaaaggtaaggtgcccaagaattaatcaggaatgattcaagccaacatccagaaaaaagaagatgattctgacgagctggttggttttgcatctctttcttgttgttaggatcgacgagctcccggcggtggacatgttcgtgacgacggcggacccggtgctggagccgccgctggtgaccgtgaacacggtgctgtcgctgctcgccctcgactacccggccgccggcgagaagctggcgtgctacgtctccgacgacgggtgctcgccgctgacgtgctacgcgctgcgggaggccgcccggttcgccaggacgtgggtgcccttctgccggcggcacggcgtcgccgtcagggcgcccttccggtacttctcctccacgccggagttcggcccggcggatggcaagttcttggaggactggacattcatgaaggttagctatggcaaccgcaacacctctcagtttctttctctctcttttttttttccattttggaagtactaacgaatttaaaaatataaggaaacatgataaccacaacacgtctcagtttctttctctttttttaatccattttggaagtactaacaaatttaaaaatataaggaaaacatgataaccacagcacgtctcagtttctttccttttttttttccaatttggaagtactaacaaatttaaaaatataaggaaacatgatttgactcgtgctctaaattaaaatcgattagatgaaatccgggataccgatatttaagtcagtcttataaaagaagcgtcgaatgggtaggataccgtcaagtgattaatcctaatatggattattagtcagaattatacggaatttcaacgttcataaaacaaataaatatatttgcttggccgtccaccttgggtgatatttaagcacattagtacccttaagtactttaaaatatttaatttaaagtttctaaaacaacatgtacagatttattttacaaagtgtaaaaatgtatttatttattatatattataataaaaataattaaatatatatttttgagatcgttcgtaacttcaataattatgtaaccgggagggagtacgtaaaccggtcatattgccagagttaaatcgtcgattgatctagaattgaatgccattgccatatatgctcagtgtaacgagctttagttcggctgctgctggagtcaattagtagatcggacgattagtcgcgaatcagcctgattaattgggccagcccggccattttggcgtccacgtcgccacaactcgtcacgaatggcagagtcgtatcggtttgtcttccgtgtaccactgtaccagtacagttggccttataatcgattggaacggccgtcattttccacactttttcgtaagcagaaatgcagcgtttcgatatgtcttctttagctattctgtgagcttccttgtttagccaaaccagtgttaaccacccttgcctctgaggaggagtttagtatcttttagctgctgctccttaaatacacatatctcgttgctagtagggattaatttattaatgttccactgcaaaatttccaaaatttccgaaattccaggtctactggtccctgatagaatattatgttggcaaaagaaatagttttttaattacacatatcttatttaagtttaatcaaaatttgttcaaatttcaacttatttcggtctgaaattttgacaatttcctgaaatttgtttctatcggttccccggtagaaatatatgcaaaccggtatgtagaaccgtggttacaggatgcacgcttttatcttggagtccaaaacagcacaagcgaaaggaagggcctattcagattgatggcattttcaactataccgttatttggtaaaatgtataattatgtggctacgtttagtttgtaaccaaatattggcaatgtgtatagaattttggcaatactattaagccaatcctaccaaaattttggcaacgttgccaatttatcaaaattttagcattgccaaattttgataaggtttattttggcatcaatctgaatggacccgaagttatcattgagtagtcatggttcctgatcttaattcgttcatggccatcttgtttatgtgcaaacatttcagagcgagtatgagaagttggtccaccggatcgaggacgccgatgagccttcccttctgcggcacggcggtggtgagttcgcagagtttctggatgttgagagggggaaccaccctactatcataaaggtatcgatccccacctgactatataaaaactttcaaatatggattctggtccctccaactccaaagtgtgtcccttgcacagagtttctcaactcatttctcaccatgaccctgaacttctgtgcttaacttggtttggttctctgctggatgatttaggttctgtgggataacaacaggagcaggacaggagatggcttccctcgtctgatatacgtctcaagggagaagagccccaacctacaccatcactacaaggctggcgccatgaatgccctggtcagtgctacatagctctttttgttactagagaaattttacggttattgagagagtatatgtagataccgaaattttgcaacacaaattttaatacatcgaggtactaagttttacaccagaaaatatggtacctctcggtacactatttgttactaaacaacatggaaagttcagacaatgtttgttactcaccaacacggcaagttcagacactgtttgtgttactcatgattggggaagttcagatatttgattgttcttaccatgattttttgtcagacaagggtgtcagcactgatgaccaacgccccattcatgctaaacctagactgcgacatgtttgtaaacaacccccgggtcgtcctccatgccatgtgccttctgttaggttttgacgatgagatcagctgcgcgtttgttcagacgccgcagaaattctacggtgccttgaaggatgatcctttcgggaaccagctggaagttagtttgatggtacacaactagctcttgcttgtacgataatttatttaatttagttgatgatccaactaaactaggttgatgatcttgtgtgattttcagaaagttggacgtgggattgcagggcttcagggcatattttattgtggaacaggctgctttcaccgcagaaaagtcatttacggcatgaggacagggcgagaaggcaccacaggtgaaattgggcaaacactgatgtgattgtcatacattagggctccatttggtattgcggtagatcataataatcacgtttgctgcaaatgttttttgacgtttggcagttggccaaccgcttttctttttaattatctacgttagaaatgataataattataattatctaatcataatttggtatgtaaacacaaacaacaacaattattagtattagttttcatgtcagcctaaactagtaagagaattcaaatttaattcttcaggttattcatctaacaaggagctccatagtaaattcggaagttcaaataattttaaggaatcagccagggatgtcatttatgggaacttgtcaacagagccaatagtagatatatcaagttgcgttgatgttgccaaagaagtagctgcctgcaactacgagattggcacatgttggggtcaggaggtacagccattgccacatgtctataggatgttactatgcagtttaatttactattctatatgtttcataaatgtcattccatatattcacaggttggttgggtctatggatcactgacagaagacgtgttgaccggacaacggatccatgcagcgggttggagatccacgctgatggaaatcgaaccaccagcattcatgggttgtgcaccaaatggagggcccgcctgcctaacccagttgaagagatgggcatcaggttttttagaaatactcatcagtcggaataacccaatcctcacaaccacatttaagagtctccaattccgacaatgccttgcatacctgcacagctatgtgtggcctgtgagggcacctttcgaattgtgctatgcattgttggggccttattgcttactatcaaaccaatccttcttgccaaaggtactactgcatcactaaccaatgcatcggttataatcttctgtactctccttgccttcttaacacagtgttgcacctcatttgcatattcaaagataaaaaaatctttccaattgaatggctagagagtgaggtatatatgaactattaactctactattgcagacatcagaagacggtttctacatcgcattagctctattcattgcctataacacatacatgttcatggagttcatagagtgtgggcagtctgcacgtgcatgttggaacaaccacaggatgcaacggatcacctcagcttctgcttggctactggcatttcttaccgtcatcctcaagaccttaggcttctccgagactgtgttcgaggtcacccgcaaagacaagagcacatcagatggtgattccaacaccgatgagcctgagccagggaggttcaccttcgacgaatcgacggtgttcattcccgtgacagcacttgcaatgttaagtgtcattgcaatcgctgtaggagcatggagggtggttttggtgacaacggaaggcttgcccggtggccctggtatcagtgaattcatctcctgtgggtggctggtgctgtgcttcatgccattgctgagaggtctagtgggaagtggtcgatatggcattccttggagtatcaagatgaaggcctgcttgcttgttgctatattcttgctcttctgcaaaagaaattaattgcagctggtgtgcagcaacaattagtccatactattatttgagcatgcaaacactaggtttcatcttcatattattatgtccgcaaacgttgactaagctctagaaaagggaacaattcaatcactaattcgaagcaaaaactggttgtttactgtaagagagaatctactcgtccatggcaagttgtcccaccggtgcaaacttgatcttagtggcatatatatagtagatttcctcttattgtacggcctgtatgcatgcatgaatccttcaaagtagaagcattggagcggtcccgtgcaaatttattttcttggatggatctactattataaaaattgaagatgtttttgctg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0341700, RefSeq:Os10g0341700