Os10g0343100

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Revision as of 08:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0343100| Description = contains InterPro domain(s): IPR010989| Version = NM_001070922.1 GI:115481587 GeneID:4348362| Length = 3866 bp| Def...")
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Gene Name

Os10g0343100

Description

contains InterPro domain(s): IPR010989

Version

NM_001070922.1 GI:115481587 GeneID:4348362

Length

3866 bp

Definition

Oryza sativa Japonica Group Os10g0343100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:10427644..10431509

Sequence Coding Region

10427761..10427837,10427944..10428100,10428717..10429370,10429480..10429666,10430168..10430196

Expression

GEO Profiles:Os10g0343100

Genome Context

<gbrowseImage1> name=NC_008403:10427644..10431509 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:10427644..10431509 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccacgtcgttcgaccgctgggagaaggaccccttcttcccggccgccgaggaggtgcaggagtccgccgaccggatggagtcggtgtacaggaggtggttgcaggagaggaaagaagtaggtggcggcgcggtggagacggcggcggaacgtggtggtggtggatgggggcgagccgctggggatctccgccgcgagctgcacacggcgctcggcaccgccaagtggcagcttgatgagttgcagcgggctattaaatcaaattatagtgttgtgttagctggcaaagatactagagctcggcatgatgactttgtttcagccattgggcatcgtatcctagaggtggagaagttcttgaaagaatccaatactactgaagggcgtggccctcttagctgggttcgcttggatgagggtgaacgtgaagagttagctcatttcctttcagcaggaacttatcaaaaacgtgatgaggtggttacaattacatctgctggtgacattgaggttggtagcaatgcaagaagggtgaaaaagggtgtttcaattgatagttcgaatgattcttcgggctcagcagagtcaggtttagtgtcaactaaggaggagacagctccaggtcataggagaacggcaagtgcctatgctgatattggatcatggactattacaattcctgatgaggccaatggcatcgatgaacaatcatttgatgatctgcccaaggtacctttggttaagagccctagctcttctgtattaatgaatgccttccaatcaaagacaagaatgaagacaaagaatggagccaagaagttggctggagctgaccaacaggatgttgtggaaactcttcctctgacaaattctcgctcgtgccaggggtttgatgggttgtttcaaagaagcaaaagttgcttgagcacctctgatgatgaggataactgcaataagaaactttatggttgccttggtgcattccgtcggctacttcagaggtctcagtatcaagttcaatatggacgtcctattcagttacttatcctagcaattgttgttttactagtcttaatttatgccatgaaggcaattttgtga</cdnaseq>

Protein Sequence

<aaseq>MATSFDRWEKDPFFPAAEEVQESADRMESVYRRWLQERKEVGGG AVETAAERGGGGWGRAAGDLRRELHTALGTAKWQLDELQRAIKSNYSVVLAGKDTRAR HDDFVSAIGHRILEVEKFLKESNTTEGRGPLSWVRLDEGEREELAHFLSAGTYQKRDE VVTITSAGDIEVGSNARRVKKGVSIDSSNDSSGSAESGLVSTKEETAPGHRRTASAYA DIGSWTITIPDEANGIDEQSFDDLPKVPLVKSPSSSVLMNAFQSKTRMKTKNGAKKLA GADQQDVVETLPLTNSRSCQGFDGLFQRSKSCLSTSDDEDNCNKKLYGCLGAFRRLLQ RSQYQVQYGRPIQLLILAIVVLLVLIYAMKAIL</aaseq>

Gene Sequence

<dnaseqindica>118..194#301..457#1074..1727#1837..2023#2525..2553#gcttcgctgccttttgccttcttcctcctcctctccaccaccaccgccaccggccgacgcatctccgattcgatttcgccttcccacgaatctatctccccccgagtccccagcgagatggccacgtcgttcgaccgctgggagaaggaccccttcttcccggccgccgaggaggtgcaggagtccgccgaccggtgcgccgcctccttcctcttcttgcctttccttcggtgcgcctccggtttctgattctggtgttctttttggagttttgagggtttgggttttttgctcgtgtaggatggagtcggtgtacaggaggtggttgcaggagaggaaagaagtaggtggcggcgcggtggagacggcggcggaacgtggtggtggtggatgggggcgagccgctggggatctccgccgcgagctgcacacggcgctcggcaccgccaagtggcaggtttgagctgggctacatccgatttaatactaggtggctggtgaaacgatgggattttggtttgactcgttttaggtttcttggattgcttgggatgagggggattgcgcggaagaattggaaagattcgaagtagtttggtttaggaattaggatgtgagaataaaccaaagtatagtttgtccgtcttctaagcttaaggttccagttattcttgaaaaaagtactaaagctttgactttgatgcatgtgcttcgttgctttctacctttttggttcttctattagagcatttgttcataacgatggcttgcttttcgttgacaagatggactatgcgttgatttgtttagacttcagatatgggcttgacaccaattcggtatgccatggcatccctgtcgtacttgaaagcttgcttttggtacttatgcataagtagaaaacggacaatcgggtcttttctttcttgcaaataaaggtgtcattttacttgtgaaattttctgctaaaggggaacacctagtaccagtaacaaaccattgatttgagatgacctatgaaaatatgaggtctgaattttagtgctgattgtggttttgttttcttttgtcagcttgatgagttgcagcgggctattaaatcaaattatagtgttgtgttagctggcaaagatactagagctcggcatgatgactttgtttcagccattgggcatcgtatcctagaggtggagaagttcttgaaagaatccaatactactgaagggcgtggccctcttagctgggttcgcttggatgagggtgaacgtgaagagttagctcatttcctttcagcaggaacttatcaaaaacgtgatgaggtggttacaattacatctgctggtgacattgaggttggtagcaatgcaagaagggtgaaaaagggtgtttcaattgatagttcgaatgattcttcgggctcagcagagtcaggtttagtgtcaactaaggaggagacagctccaggtcataggagaacggcaagtgcctatgctgatattggatcatggactattacaattcctgatgaggccaatggcatcgatgaacaatcatttgatgatctgcccaaggtacctttggttaagagccctagctcttctgtattaatgaatgccttccaatcaaagacaagaatgaagacaaagaatggagccaagaagttggctggagctgaccaacaggatgttgtggaaactcttcctctgacaaattctcgctcgtgccaggtgtgggaaaaaaaatctgaattgcatttttcttttccaacgcattatttgtatactattaattacgtacatagcaatgttctaagccaatgttggcttattattttaggggtttgatgggttgtttcaaagaagcaaaagttgcttgagcacctctgatgatgaggataactgcaataagaaactttatggttgccttggtgcattccgtcggctacttcagaggtctcagtatcaagttcaatatggacgtcctattcagttacttatcctagcaattgttgttttactagtctgtaagttacttttcctatttccttcataatgttaatttgatgggacctttatcaaatagaggtgaaatacagattgtttcaagcgtctgattatacattacaatgcctttactttgctagtatctttaacatattgtattgttcatggaatttgctaatctaatgttttcgtaatttaattggtctgctagggcttgtcgccatggtgctatataacataagttttgttttgcaccagattgaatctgtaattgacaacacctacttattaaggacacggattttgacattttgtttccattatgttgaattttgacccataaattgttatgccattaattgatcactttttcaattttatctcatttatatcttatgtactgtagtatttttctatctgtcccaaatgtttcagttcctagttcaaccaagtattttgagtttgttatatgattgatgagctcattgaactcactatgatttgttttgtgtttgtttcagtaatttatgccatgaaggcaattttgtgacttttttgatcaactagtgtctcacgattgacttgcacttcttcatcagcagtctgtaaggtatgcttatgatttgtttaatgtaatttgcaagacaatgactgctaattagattttttactgtgttcaactgatattttttttaacttgccaaatttctgcagttgttttttgtatatgttttcttaagttgatctttttctgcgcataaaatattcggaaatttctaaactctttggataagaaaaacatgttactactatatagtagggcaatacgaagctaggtgtacgctttgataaatctataattcaaaaatatgttcatagtgttagccctactgagtcctttgtgatgaaagttgcttatacttatcagtcatattgaggaatttctaagactagcactgttcagcagatttatgaacatcttttccttataatgcaggtgtatgacaattcatagctgatgaaactaaaaggggaagtggtattgtttctctagctagttgaatgccagtgacagtgaacactgttttgtatgttcgaagggattctatcataactcgcaagattgtcttggctatgaagaaacaacctgacatgggaagcacaacatttagcaacccaatatagcaaaatcagtgaaggattgattgtatggaccggcagatcatttcgtgtgccttaagcccagaggaactgaacaatcatcttcatataccagttttgctgatgctgcatctgcaacattttaaacagtctggtgcagtactgcagccttgttaacctgtgcaattcagcagtacatagagctagaatgctgatgctacaactggcaaacaacagttttgtgcacgcagctgtggggtttgcctggataattgagtggcatctccatgtactgtattccaattactgatgtctcaagtatagtgctaggtggcatgaactttgcggaagaatttgagtacctatattttgatgctatagattggcttggagaaggctgaaaattcatctattaacacaagtatcgcaagagctgcaggactacaggtcttgcagcctgtacagatggttgtgttttgtacactagaggtgcagtttagaagaacagaaaaattcttctgttcttagacattggagtaacttttaccacacgattggcttgtaacctgtaaataactactgcttcaaatgagcacctgttcttacaaatttgataatgttgggtgtcggtctgcactgcaacatccaaaaaacctttgtaagtaagcacatgtcaacagcttgaaattcaacatacttctg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0343100, RefSeq:Os10g0343100