Os10g0343500

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Revision as of 08:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0343500| Description = Conserved hypothetical protein| Version = NM_001189165.1 GI:297727460 GeneID:9266911| Length = 4456 bp| Definition ...")
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Gene Name

Os10g0343500

Description

Conserved hypothetical protein

Version

NM_001189165.1 GI:297727460 GeneID:9266911

Length

4456 bp

Definition

Oryza sativa Japonica Group Os10g0343500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:10447127..10451582

Sequence Coding Region

10447127..10447351,10447435..10447482,10447827..10447886,10448049..10448114,10448200..10448262
,10448341..10448388,10448506..10448571,10448849..10448914,10449016..10449081
,10449178..10449243,10449331..10449414,10449666..10450010,10450094..10450189
,10450485..10450688,10450790..10451082,10451189..10451314,10451573..10451582

Expression

GEO Profiles:Os10g0343500

Genome Context

<gbrowseImage1> name=NC_008403:10447127..10451582 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:10447127..10451582 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcaggaaggcaatgaagacactgatgacgattttgatatcaatgatggagaaagcaatgaagacactaatgacgatgttgatattgatgatgaaagcaatgaagatactgatgttgatattaatgttcgagttgaaaatggagcacctgaaacacgtggcaagacaaaactgaaagatgtttggaacctttcgacaaaactgaaagatgtttggaaccttccgaaagggcttagaattgtggttcaatgcaatgatctcaatcaggcggtaggggaagaagctggaattttgggtaaatttcttggaatggtagctaggaatggtagtctgtgtagcttaggctacacagactggagatatgtaataggaaagagagagaaaaatacaaatgaactaaaagttaaaaaggacatacttaagcaaatgagattcctttatgctcctcggatggaagagttcatattaaaaaaaattgtagaaagatggtggcaatataaagcaaaactaaaagatttgtattttgatgtgaatgagactaaggaagctaattgcaacaatgtcctagaaggtgtgctttctgaccagtggattgctcttgtcaatcattggatgaacgagaaatcgaagagacaaaaagatcctgcaaagaagaaaccacatagagctgttgtttatgtccacacacacaagcgcaaaagtgacaagaatataaatgggcatgtggataatttgaagagacttatagctgaacaactagctttagcggatgctagtaaaggaaagactgcttggaaaggagatgcattgaaccaaatactaggagatgacaagcctgggcgtgtgcatggtcttggactagttccaaagcctaaacaagtgcttgatgtgccaacttcccgacgtttgcagaatataaatcttactacagtggaggataactccagtgaagatgtaatggctattagactgcagatggaaaagttagaacgccatgttgagaataatgatgctgaacttttacaattaaaagagaaggcaaccaagttggaaaaggcacaaaagaatcagagagtgtatggtgacaacccctcgcaagaaatttgtatgtttgaggagggaaacattatggatcagcaggacaacagtttgatgaatacacaaagccatgtgcacgatgagaatttgcaaccaccaaccaagcattctactgtttacaagaatacacagtctttgggccagaatcacagtgggaagcaaaggaagattacttcctgtgcaaacaagcgcaaaggaaatttggaccagaatgagcttatgcaaccagggaagagtatttctagtgcatacaagaacaaagagaaccttacccgcaagcttgttagaccaagcctaaacaagtatagtactgcttctaagaaacgacaatgcaacacaatggactttttaactgacaattcaacagtgaaagtgtatggtgacggtcccttgcaagaaatttgtcatgttgagcaggaaaacattgtgatgaattcacaaagccatgttcaagatgaggataagacaccaccaaccaagcatgctactgcacacaagaacaaacgaacctttggcctaaatgaccatgggaaacagatggagattatttgtgccaagaaacaacagtgcaacaaaatggactttatcactgacaattcaatggaggttggaactaaagtattcttaaaaagttggaaaaatcggaatacaaacgtggctcttgccactattgtaagctgtgatccaacacacagagttggaggtgttgagctaggaaatgaatttttaatggttcatgtcgatcttgcattggcaaaatccgaagatttgattaggccatacaaaggctacaaaattgttggtcatgttgtaggacttgaaattgcgtag</cdnaseq>

Protein Sequence

<aaseq>MAQEGNEDTDDDFDINDGESNEDTNDDVDIDDESNEDTDVDINV RVENGAPETRGKTKLKDVWNLSTKLKDVWNLPKGLRIVVQCNDLNQAVGEEAGILGKF LGMVARNGSLCSLGYTDWRYVIGKREKNTNELKVKKDILKQMRFLYAPRMEEFILKKI VERWWQYKAKLKDLYFDVNETKEANCNNVLEGVLSDQWIALVNHWMNEKSKRQKDPAK KKPHRAVVYVHTHKRKSDKNINGHVDNLKRLIAEQLALADASKGKTAWKGDALNQILG DDKPGRVHGLGLVPKPKQVLDVPTSRRLQNINLTTVEDNSSEDVMAIRLQMEKLERHV ENNDAELLQLKEKATKLEKAQKNQRVYGDNPSQEICMFEEGNIMDQQDNSLMNTQSHV HDENLQPPTKHSTVYKNTQSLGQNHSGKQRKITSCANKRKGNLDQNELMQPGKSISSA YKNKENLTRKLVRPSLNKYSTASKKRQCNTMDFLTDNSTVKVYGDGPLQEICHVEQEN IVMNSQSHVQDEDKTPPTKHATAHKNKRTFGLNDHGKQMEIICAKKQQCNKMDFITDN SMEVGTKVFLKSWKNRNTNVALATIVSCDPTHRVGGVELGNEFLMVHVDLALAKSEDL IRPYKGYKIVGHVVGLEIA</aaseq>

Gene Sequence

<dnaseqindica>4232..4456#4101..4148#3697..3756#3469..3534#3321..3383#3195..3242#3012..3077#2669..2734#2502..2567#2340..2405#2169..2252#1573..1917#1394..1489#895..1098#501..793#269..394#1..10#atggctcagggtataatcaattctgaaattattctgtctgaaactatgtacagcacagtcctacttctgaaatgagaatgatatactttcgacgccataaatgacagataggtttttttgggtgcaagagatatggcaaggagtagaagaaggcgtattgttcagagcaatgaggaatatttgtcagaggaacagactgaagaagaaaatacccttccatagcttgccacaccatctgaacaagaaactgtatgtgatgattttggagaaggcaatgaagacactgatgacgattttgatatcaatgatggagaaagcaatgaagacactaatgacgatgttgatattgatgatgaaagcaatgaagatactgatgttgatattaatgttcgaggtaactgctaagtttaacagtcctaatggtaagaaataatgacattattactcgtatccctgattactaaggatcacttttgtctttgcaatttaacaccgaacagttgaaaatggagcacctgaaacacgtggcaagacaaaactgaaagatgtttggaacctttcgacaaaactgaaagatgtttggaaccttccgaaagggcttagaattgtggttcaatgcaatgatctcaatcaggcggtaggggaagaagctggaattttgggtaaatttcttggaatggtagctaggaatggtagtctgtgtagcttaggctacacagactggagatatgtaataggaaagagagagaaaaatacaaatgaactaaaagttaaaaaggacatacttaagcaagtaaggtaattccttttcagatcaacatttttgctaacttcttgtattatgttatgcatatccccatatggccatatgagtttctgtgttgctatatgtagatgagattcctttatgctcctcggatggaagagttcatattaaaaaaaattgtagaaagatggtggcaatataaagcaaaactaaaagatttgtattttgatgtgaatgagactaaggaagctaattgcaacaatgtcctagaaggtgtgctttctgaccagtggattgctcttgtcaatcattggatgaacgagaaatcgaaggtacatgtaccatattcatttctgtaatggtcttacaaattagaactctgtactaaacaaaacaatgcaatattcttttttgattgctaactctacgagaccataacagagaataagtgagcagaataagaaaaactgccaaaagaagaaggcaattcacacagcagggacaaagagttttgctcacacaagagaagagatggtaaaacatgtcttgaatagtattcatctatttccatttcaagcatgtatagctactgttaagactttactgatttggtcatgtgttccatagagacaaaaagatcctgcaaagaagaaaccacatagagctgttgtttatgtccacacacacaagcgcaaaagtgacaagaatataaatgggcatgtggtatactattaacactcaaccatagatatttttcagttattctcatatgttgttttattcgtattaatttttcatatgtttaggataatttgaagagacttatagctgaacaactagctttagcggatgctagtaaaggaaagactgcttggaaaggagatgcattgaaccaaatactaggagatgacaagcctgggcgtgtgcatggtcttggactagttccaaagcctaaacaagtgcttgatgtgccaacttcccgacgtttgcagaatataaatcttactacagtggaggataactccagtgaagatgtaatggctattagactgcagatggaaaagttagaacgccatgttgagaataatgatgctgaacttttacaattaaaagagaaggcaaccaagttggaaaaggcacaaaagaatcaggtgaatttaagggagttgagtcctaaaaaaattatatgagcttgtgtgtgacccaatgaatgcatctaacttacctaattgaagtaacagggaggtttagatggagcgtcaacaaacaaaaaagctatttgtgatgacgtacctaattcaaaaaggagggtatgtatctttatggaagaaatatcataacattttctgcattatctcataaactgtggtatagatctctgttcattttctgttatggacagagagtgtatggtgacaacccctcgcaagaaatttgtatgtttgaggagggaaacattatggatcagcaggacaacagtttgatggtaatgtgatatagcaccatcttataactgggaatagctgtgtttttttacttgggaatagcatttattttctctcttttacaatagaatacacaaagccatgtgcacgatgagaatttgcaaccaccaaccaagcattctactgtttacaaggtccttgcctttgcatttaaaatattattatatatatatatattcactattatttacatagcattcattataatcatatgccttcttttactctagaatacacagtctttgggccagaatcacagtgggaagcaaaggaagattacttcctgtgcaaacaaggttaatttcacttttttattaattggagtgcatgatgtcagagtaaacaaataattggaacattatagtttgtgccaattttatgagctattccattgcagcgcaaaggaaatttggaccagaatgagcttatgcaaccagggaagagtatttctagtgcatacaaggtaagttgattaagttctctctttatcctttcaaactcaatgccatagtcaataagtgtttgaaagtagcttaatttcgatatataaatgtatatatagatttgtaaaatttatttgttaccttccactgtagaacaataaacctaacaaccaggacaactatatggtgaatgcacacaaagttacaagtacacacaaggttattttttcatcactttaagtcaccatgtctacagatataagctctttgaaactataacacacatgtgtattgcagaacaaagagaaccttacccgcaagcttgttagaccaagcctaaacaagtatagtactgcttctaaggttagtctaattgtttcaagttcaaaatgctatttctatttattgaacactacacaacaactaaaatagcacacacagcatgttggtttttactgtaaattctctctattttttcagaaacgacaatgcaacacaatggactttttaactgacaattcaacagtggtaaaccttgctaacattttagtctaaatagtttaataaaatctggtcttaatgtccttttattttccactgtgatagaaagtgtatggtgacggtcccttgcaagaaatttgtcatgttgagcaggaaaacattgtgatggtaatatacataaatttcattgttttatacatgggaatagttgcactattttgtaactgggaatatatgctctctttgacaacagaattcacaaagccatgttcaagatgaggataagacaccaccaaccaagcatgctactgcacacaaggtccttgtctttcaatttatatttttattctgaactcaccatggttgcatcctattatatggttatcatggatacatagcattatattatttggtactgtttgtaactaactatgaatgtttactatagttcatgacaatgtgatgtattcttttattctagaacaaacgaacctttggcctaaatgaccatgggaaacagatggagattatttgtgccaaggttagttttcacttcttatttagttcaaaaattatttgatagaaaagtttgaaagtaaaatttcttaatatatataattttagcactgatttgttgccctcccctatagaacaagaaacctgacaatcaggaaagccatatggtacatgcacataaagttggtggtgcatacaaggttgtttttttattcaccatgtttacaaatatcagtccattcaaactataacatgcatgattcactagtattatgattcaattggagaacaataattggctctgtttggtctttctttctttctatcttgtggttaaattgcaaaccatgatccaaattttttttatagaaacaacagtgcaacaaaatggactttatcactgacaattcaatggaggtattttactgtgaaattatttatgatacttgaatttcttaaagtacattgataatattgatggatgtatttatgcacttcaggttggaactaaagtattcttaaaaagttggaaaaatcggaatacaaacgtggctcttgccactattgtaagctgtgatccaacacacagagttggaggtgttgagctaggaaatgaatttttaatggttcatgtcgatcttgcattggcaaaatccgaagatttgattaggccatacaaaggctacaaaattgttggtcatgttgtaggacttgaaattgcgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0343500, RefSeq:Os10g0343500