Os10g0344900

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Revision as of 08:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0344900| Description = Multi antimicrobial extrusion protein MatE family protein| Version = NM_001070928.1 GI:115481599 GeneID:4348368| Len...")
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Gene Name

Os10g0344900

Description

Multi antimicrobial extrusion protein MatE family protein

Version

NM_001070928.1 GI:115481599 GeneID:4348368

Length

2681 bp

Definition

Oryza sativa Japonica Group Os10g0344900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:10550275..10552955

Sequence Coding Region

10550347..10550595,10550705..10551249,10551504..10551590,10551687..10551743,10551846..10552084
,10552208..10552326,10552464..10552550,10552653..10552703

Expression

GEO Profiles:Os10g0344900

Genome Context

<gbrowseImage1> name=NC_008403:10550275..10552955 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:10550275..10552955 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaagccggcggcgagcgtggaggagccgctgcttgttggcgctggcgagaagaagggcgagagcgcggccgcggcggagctgaagcggctgctccggctggcggggccgctggtggcgagcggcgtgctgcggaacgtggtgcagatggtgtccgtcatgttcgtcggccacctcggcgagctccccctcgccggcgcctccctcgccacctccctcgccaacgtcaccggcttcagcctgctcttcggcatggcgagcgcgctggacacgctgtgcgggcaggcgtacggcgcgcgccagcaccacctcctcggcgtctacaagcagcgcgccatgctggtgctcgccgtggccgccgtgcccatcgcgctcgtctgggccagcgccggcgagatcctcctcctgttcggccaggacccggccatcgccgccgaggccggcgcgtacgcgcggtggctgatcccgtcgctcgtcccgttcgtgccgctggtgtgccacatccggttcctgcaggcgcagagcgccgtgctgccggtgatggcgagctgcggcgtcacggcggcgagccacgtggccgtgtgctgggcgctggtgcgcaaggccggcatgggcagcaggggcgccgcgctggcgaacgccgtctcctatggcgtcaacctcaccataatgtctctctatgtcaggctgtcgcgctcctgcgagaagacatggactggcttctccatggaggccttcagggagctccgccagtatgcggagctcgccatccccgcggcaatgatggtctgtttggagtggtggtcatttgaatttcttgtgatgctctctggtcttctgcccaatcctaaacttgaaacctcagtgttgtcgatatgtctcaacactggtgctctgctggtcatggttccaattggtctcagcacagctataagcacgcgtgtttggaacgaactaggtgccggcaatccccaggcagcgaagctggcaactcgagtggtcatatgtatggccatgaccgaaggctcggtggttgcgtttacgatgattctgttgcgcaattcctggggtcacatgtacagtgatgaggctgaagttgtcacctacattgctcgtatgatacctgttctagccatatcattcttcattgatgggatgcacagcgctctttcaggagtgctcactggatgtggcaagcagaagatcggcgcacgggtaaatcttggcgcattttacttggcaggcattcctatggccgtctttcttgcatttgtgctacatctgaatggaatgggcctttggcttggcatcgtttgcgggagcctcagcaagcttatcttgctcttttggatcacaatgagtataaactgggagaaggaatcaaccagggcgaaagaattggtgttcagttcatctcttcctgtagcatga</cdnaseq>

Protein Sequence

<aaseq>MEKPAASVEEPLLVGAGEKKGESAAAAELKRLLRLAGPLVASGV LRNVVQMVSVMFVGHLGELPLAGASLATSLANVTGFSLLFGMASALDTLCGQAYGARQ HHLLGVYKQRAMLVLAVAAVPIALVWASAGEILLLFGQDPAIAAEAGAYARWLIPSLV PFVPLVCHIRFLQAQSAVLPVMASCGVTAASHVAVCWALVRKAGMGSRGAALANAVSY GVNLTIMSLYVRLSRSCEKTWTGFSMEAFRELRQYAELAIPAAMMVCLEWWSFEFLVM LSGLLPNPKLETSVLSICLNTGALLVMVPIGLSTAISTRVWNELGAGNPQAAKLATRV VICMAMTEGSVVAFTMILLRNSWGHMYSDEAEVVTYIARMIPVLAISFFIDGMHSALS GVLTGCGKQKIGARVNLGAFYLAGIPMAVFLAFVLHLNGMGLWLGIVCGSLSKLILLF WITMSINWEKESTRAKELVFSSSLPVA</aaseq>

Gene Sequence

<dnaseqindica>73..321#431..975#1230..1316#1413..1469#1572..1810#1934..2052#2190..2276#2379..2429#ggctgcctcccacaattcggtggtcactcgtcagtcgtgtcgtctgctcacgctcgccaagaaagattggccatggagaagccggcggcgagcgtggaggagccgctgcttgttggcgctggcgagaagaagggcgagagcgcggccgcggcggagctgaagcggctgctccggctggcggggccgctggtggcgagcggcgtgctgcggaacgtggtgcagatggtgtccgtcatgttcgtcggccacctcggcgagctccccctcgccggcgcctccctcgccacctccctcgccaacgtcaccggcttcagcctgctcgtaagcatcggtcgaacaccttgcgcgcacgcaaagaactgcttgatccctgtcgatttattggtcggatttgtgaatgctttcttggttggtcgatttcgatcgtcagttcggcatggcgagcgcgctggacacgctgtgcgggcaggcgtacggcgcgcgccagcaccacctcctcggcgtctacaagcagcgcgccatgctggtgctcgccgtggccgccgtgcccatcgcgctcgtctgggccagcgccggcgagatcctcctcctgttcggccaggacccggccatcgccgccgaggccggcgcgtacgcgcggtggctgatcccgtcgctcgtcccgttcgtgccgctggtgtgccacatccggttcctgcaggcgcagagcgccgtgctgccggtgatggcgagctgcggcgtcacggcggcgagccacgtggccgtgtgctgggcgctggtgcgcaaggccggcatgggcagcaggggcgccgcgctggcgaacgccgtctcctatggcgtcaacctcaccataatgtctctctatgtcaggctgtcgcgctcctgcgagaagacatggactggcttctccatggaggccttcagggagctccgccagtatgcggagctcgccatccccgcggcaatgatggtctggtaaggacaacatcatgtacttcattagaaattttgtagtccttgagaaagcaacgggaggtaccatgattttacgctagaaattttggtacctcaagatgcttagtatctagatgtactaaattttacactagaaaatgtggtacgacacattttcaaggatggtaaaatttgcagagatcgaaaactgcttacattgtctaaaattatatttatagcttgactaatgttggattaatttcttgattacgcagtttggagtggtggtcatttgaatttcttgtgatgctctctggtcttctgcccaatcctaaacttgaaacctcagtgttgtcgatatggtaatcaatcacaagattatgtctctgatacaaatttaataaattaacatgaatgaaacgaagtatgtttactaaattgtttgctggattctgcagtctcaacactggtgctctgctggtcatggttccaattggtctcagcacagctataaggtcttgagattctgcaataaaatgttcagatatgatactctgctattttgatccttttttctgcttagagtctggctgatttctttcttttctactgcctagcacgcgtgtttggaacgaactaggtgccggcaatccccaggcagcgaagctggcaactcgagtggtcatatgtatggccatgaccgaaggctcggtggttgcgtttacgatgattctgttgcgcaattcctggggtcacatgtacagtgatgaggctgaagttgtcacctacattgctcgtatgatacctgttctagccatatcattcttcattgatgggatgcacagcgctctttcaggtaaaaacctcctgcatggatgatgtcagtgacactgccacattataagcatgtaaatgaagttacctgatgcataagtcaggaacagaatgatcagaagatcattgtctgaatatttttcaggagtgctcactggatgtggcaagcagaagatcggcgcacgggtaaatcttggcgcattttacttggcaggcattcctatggccgtctttcttgcatttgtgctacatctgaatggaatggtactgctatttgtctgaatattccctttcgttttttaaaaaatagctgcagattcacatctagcacttcgcacatgtttcagtataaacaacatggatgtatctctgaaagactgaaaattttgtgctttcattagggcctttggcttggcatcgtttgcgggagcctcagcaagcttatcttgctcttttggatcacaatgagtataaactgggagaaggaagtaagttatctgaggatgcctaccattttatatcagggtagctaccaattttcctttcattgtaaaatgtgtcatatgctcatgtttgcaatttcatttcagtcaaccagggcgaaagaattggtgttcagttcatctcttcctgtagcatgaagaaaaacaatgcatcagaatttcatgatatggtgcaattgttattgtgaaagcaacacagaaccaaatgttatgaagctcgcctttcatctttaagcacccagtttattaacatttgtaacatgaatttttgttcttgtgataacacctatttaatattttttttcttgttcagattgtactctgtaaactaaggatatatcttatatgcatcgattaattgaaaatctaagaagcatattataggaaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0344900, RefSeq:Os10g0344900