Os10g0347800

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Revision as of 08:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0347800| Description = Actin-binding FH2 domain containing protein| Version = NM_001070937.1 GI:115481617 GeneID:4348378| Length = 3902 bp|...")
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Gene Name

Os10g0347800

Description

Actin-binding FH2 domain containing protein

Version

NM_001070937.1 GI:115481617 GeneID:4348378

Length

3902 bp

Definition

Oryza sativa Japonica Group Os10g0347800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:10739100..10743001

Sequence Coding Region

10739100..10739891,10740597..10740838,10741377..10741579,10741689..10743001

Expression

GEO Profiles:Os10g0347800

Genome Context

<gbrowseImage1> name=NC_008403:10739100..10743001 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:10739100..10743001 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgcccacgctcgcgctcctcctcttcctcgccctctcggcggtggccgctgtcggcggcgccggcgacgtgcggcgggtgctgcacgagccgctgttccccatcgagtggacaccgccgccgtccacggcgtcgccgtcgccaccgtccccggacttctcctccgacccctccacgcccgccacccccgtggacaacggcggcccggcgctgctcccgccgccgccgccgaacacagtcgccgccgacgtgtcgtcgtcgcgcagcgggccggacccgcgggcgcgcgggggaggcggcggcggcacgccaaaggccgccatcgtggtcgcctccgccgccgccgccgcggtcctcgcgctgctcgccttcgcggccgcgttcctcctcacgggccgcctggcgcgccaccccgccgcggccgccgcccaggcgcacaagccgccaggccacgcgcacgctggcgctggctccgtcgcgggggcgcacgccgacgtggcgggctgctcgacggcggtctcgccgtaccgcaaggtgcgcccggagcgcgcgcgccgtggcatgtgccgtgacgtcgacaccgtcccgagcccggagctccggccgctcccgccgctgcggcgaggtgcgtccgcgctgacgcaaggatcgtccgacgaggacgcggcgtactacacgcctgggcagcgctcggctggctccggtggcggtggcggcggcgagggcggcgggacgtggagcgaggcgagcgcgtccagcccgcgcaccaccacagcctcccgccgcagcctccccagcctcaccagcgacttcttccccacgacgccggccgccgcgcccgtgcccgcgcccgccgccgctgctccccctcctgccccacccgcgccacgctcccgtcgaacacctcctcgcacccgcttctccgccggctccggcgccgaaatgaacaaacagatggcctcgccaccctccaacccaccacccgcgccgccgccgcctccaccaccaccatcaagattcaacaacacaaccccaaagcctccaccgccgccgccgccgccggagccaccaactgggccagtctctgctcgccggctgctcagaccgctcccagcagagggccccagcattgtgatacccagggcgccagcaatggcggtgacaaaggacaacgacgccaccgccgccaccatgtcagtgcgaacgcggggtgaagccgccggcgacgagccccggccaaagctgaagccactgcactgggacaaggtccggacgagctccgaccgcgacatggtctgggaccggctcaagttggatgaggatatgatcgaggtgctattcatgaacaattcgacagccgtggcgcctaggatggacaacccgaagaaagtcggcatgccgcaatttaagcaagaggagagagttcttgaccccaagaaggcacagaacattgccatcctgcttcgcgcgctgaatgtcactctcgaggaggttacggatgcgcttttagatggtaatgctgaatgtttgggagctgaacttttggagaccttagtaaagatggctccaaccaaagaggaagaactgaaactgcgagatttcactggggacttatcaaagcttggttcggcagagcgctttcttaaagcagttcttgatataccgttcgccttcaaaagagttgatgttatgctataccgagcaaattttgagaatgaagtgaattatctcaggaaatcttttcaaacgcttgaggcagcttgtgatgatttaaaaggcagtagattgttcttaaaactccttgaagcagtgctgaggacagggaacagaatgaatgttggcacaaaccgaggtgaagccaaagctttcaagcttgacaccctcctcaagcttgcagatgtcaaaggcgccgacggtaaaaccacactgctgcactttgtcgtccaagaaatcgtccggtcagaggacgcaaaatctgaaaaggctccagaaaaccacatcacaaacatcgcgaaagttgaacagctgcgtcgacagggcctaaaagttgtgtctgggttgagcaccgagctaggaaatgtcaagagagcagcaaccatggacttcgacgtgctacacggctacgtatctaagcttgaagccggtcttggaaagatcaagtcagtcctccagctcgagaagcaatgcagccaaggggtgaatttcttcgcgacgatgcgtgaatttctcaaggaagctgagcaggagatcgagcaagtgaggcacgacgagaaggcggcactcggaagagtgaaggagatcactgagtacttccacggtaacgcggtgaaggaggaggcacaccctctgaggatattcatggtggttagggacttcctctcaatgctggatcatgtttgcagggaagtcagccagcaggacaggacatttgttgggtcagcgaggtccttccgtatatcagcagcaaatgcattgccgatcctgaacatgcaagggcagaaaggaggaagagagagtagctctgacggagatagcccgtctatgtag</cdnaseq>

Protein Sequence

<aaseq>MPPTLALLLFLALSAVAAVGGAGDVRRVLHEPLFPIEWTPPPST ASPSPPSPDFSSDPSTPATPVDNGGPALLPPPPPNTVAADVSSSRSGPDPRARGGGGG GTPKAAIVVASAAAAAVLALLAFAAAFLLTGRLARHPAAAAAQAHKPPGHAHAGAGSV AGAHADVAGCSTAVSPYRKVRPERARRGMCRDVDTVPSPELRPLPPLRRGASALTQGS SDEDAAYYTPGQRSAGSGGGGGGEGGGTWSEASASSPRTTTASRRSLPSLTSDFFPTT PAAAPVPAPAAAAPPPAPPAPRSRRTPPRTRFSAGSGAEMNKQMASPPSNPPPAPPPP PPPPSRFNNTTPKPPPPPPPPEPPTGPVSARRLLRPLPAEGPSIVIPRAPAMAVTKDN DATAATMSVRTRGEAAGDEPRPKLKPLHWDKVRTSSDRDMVWDRLKLDEDMIEVLFMN NSTAVAPRMDNPKKVGMPQFKQEERVLDPKKAQNIAILLRALNVTLEEVTDALLDGNA ECLGAELLETLVKMAPTKEEELKLRDFTGDLSKLGSAERFLKAVLDIPFAFKRVDVML YRANFENEVNYLRKSFQTLEAACDDLKGSRLFLKLLEAVLRTGNRMNVGTNRGEAKAF KLDTLLKLADVKGADGKTTLLHFVVQEIVRSEDAKSEKAPENHITNIAKVEQLRRQGL KVVSGLSTELGNVKRAATMDFDVLHGYVSKLEAGLGKIKSVLQLEKQCSQGVNFFATM REFLKEAEQEIEQVRHDEKAALGRVKEITEYFHGNAVKEEAHPLRIFMVVRDFLSMLD HVCREVSQQDRTFVGSARSFRISAANALPILNMQGQKGGRESSSDGDSPSM</aaseq>

Gene Sequence

<dnaseqindica>3111..3902#2164..2405#1423..1625#1..1313#atgccgcccacgctcgcgctcctcctcttcctcgccctctcggcggtggccgctgtcggcggcgccggcgacgtgcggcgggtgctgcacgagccgctgttccccatcgagtggacaccgccgccgtccacggcgtcgccgtcgccaccgtccccggacttctcctccgacccctccacgcccgccacccccgtggacaacggcggcccggcgctgctcccgccgccgccgccgaacacagtcgccgccgacgtgtcgtcgtcgcgcagcgggccggacccgcgggcgcgcgggggaggcggcggcggcacgccaaaggccgccatcgtggtcgcctccgccgccgccgccgcggtcctcgcgctgctcgccttcgcggccgcgttcctcctcacgggccgcctggcgcgccaccccgccgcggccgccgcccaggcgcacaagccgccaggccacgcgcacgctggcgctggctccgtcgcgggggcgcacgccgacgtggcgggctgctcgacggcggtctcgccgtaccgcaaggtgcgcccggagcgcgcgcgccgtggcatgtgccgtgacgtcgacaccgtcccgagcccggagctccggccgctcccgccgctgcggcgaggtgcgtccgcgctgacgcaaggatcgtccgacgaggacgcggcgtactacacgcctgggcagcgctcggctggctccggtggcggtggcggcggcgagggcggcgggacgtggagcgaggcgagcgcgtccagcccgcgcaccaccacagcctcccgccgcagcctccccagcctcaccagcgacttcttccccacgacgccggccgccgcgcccgtgcccgcgcccgccgccgctgctccccctcctgccccacccgcgccacgctcccgtcgaacacctcctcgcacccgcttctccgccggctccggcgccgaaatgaacaaacagatggcctcgccaccctccaacccaccacccgcgccgccgccgcctccaccaccaccatcaagattcaacaacacaaccccaaagcctccaccgccgccgccgccgccggagccaccaactgggccagtctctgctcgccggctgctcagaccgctcccagcagagggccccagcattgtgatacccagggcgccagcaatggcggtgacaaaggacaacgacgccaccgccgccaccatgtcagtgcgaacgcggggtgaagccgccggcgacgagccccggccaaagctgaagccactgcactgggacaaggtccggacgagctccgaccgcgacatggtctgggaccggctcaagtcaaattcattccagttaagataaaaatttcagaaaaaaagatctggaattcttatgctgttcattacatttttcaatttgttgattgctgatatgaacatgttgcaggttggatgaggatatgatcgaggtgctattcatgaacaattcgacagccgtggcgcctaggatggacaacccgaagaaagtcggcatgccgcaatttaagcaagaggagagagttcttgaccccaagaaggcacagaacattgccatcctgcttcgcgcgctgaatgtcactctcgaggaggttacggatgcgcttttagatggtaagcaataattgtttggcctctgtttactactctctccgtccgaattttaactttttgcttttaatgtttgaccacttgttttatttaaaaaatttgtacaaatataaaaaacgaaatgttatgcttaaaatattttggataataaagtaagtcacaaataaaataaataataattctaaaattttttgaataagatgaatggtcaaacagtacaaataaaatgtcaaaatcccttatatcatgagactgagggagtatgataatttagataggaaaaaaggcatatcttactaagggcaagtaatactagttgttggattctgttgtgatctattctgaactgtcctcagaaaaaaatatcatttgaactgtagggcagcagaccagcagtagtatgagtaaggttactaggagtataaaatactactacatgctaatacagcaatacacacctctcagcgatgcagaattggataaaaactataaacactttgcatctaattccagtaaccatatgttgttcatctataaataggtaatgctgaatgtttgggagctgaacttttggagaccttagtaaagatggctccaaccaaagaggaagaactgaaactgcgagatttcactggggacttatcaaagcttggttcggcagagcgctttcttaaagcagttcttgatataccgttcgccttcaaaagagttgatgttatgctataccgagcaaattttgagaatgaagtgaattatctcaggaaatcttttcaaacgcttgaggtattgcagttcacgttgtatttgtctctatcatgggttactgcattaacatatattgttatatgccatcatttactgcataaaactaatactccataaaacatatatggactagatgcttgaatttggactgcaccatggtaaaaaattctaatatattacactacctgaatttatatatcatcaagctgtgttagttttgaaaaatttatggactctagtgcacatttgagttacacaaacatttaaaatttcaatccgaaattagtatgtggtacactacttaacataatataaagttctttcagagtttttgttcatgatttacgaatctttctaaattctttatatcatggaaaattttggcactaaattttttttttggtgcttattaaatcacatatactgcaataattaaggaacttgacaatatattcatgcactcgacaaaaatggggtctgggaacccttgggtagcaatgtattttcacaagatattaggaagtttggagatttatattgcagatggttggtcaatccttggccaggaacatgcgtgataactattgtgtgttaacaccattttagtttgtttgcttgcttttcaagcgtactaacttttaccatatacagaaattattatgaagtccttaaagtctctcactggctctttttagtagcttaacacttctacttgcttttcaggcagcttgtgatgatttaaaaggcagtagattgttcttaaaactccttgaagcagtgctgaggacagggaacagaatgaatgttggcacaaaccgaggtgaagccaaagctttcaagcttgacaccctcctcaagcttgcagatgtcaaaggcgccgacggtaaaaccacactgctgcactttgtcgtccaagaaatcgtccggtcagaggacgcaaaatctgaaaaggctccagaaaaccacatcacaaacatcgcgaaagttgaacagctgcgtcgacagggcctaaaagttgtgtctgggttgagcaccgagctaggaaatgtcaagagagcagcaaccatggacttcgacgtgctacacggctacgtatctaagcttgaagccggtcttggaaagatcaagtcagtcctccagctcgagaagcaatgcagccaaggggtgaatttcttcgcgacgatgcgtgaatttctcaaggaagctgagcaggagatcgagcaagtgaggcacgacgagaaggcggcactcggaagagtgaaggagatcactgagtacttccacggtaacgcggtgaaggaggaggcacaccctctgaggatattcatggtggttagggacttcctctcaatgctggatcatgtttgcagggaagtcagccagcaggacaggacatttgttgggtcagcgaggtccttccgtatatcagcagcaaatgcattgccgatcctgaacatgcaagggcagaaaggaggaagagagagtagctctgacggagatagcccgtctatgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0347800, RefSeq:Os10g0347800