Os10g0359500

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Revision as of 08:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0359500| Description = No apical meristem (NAM) protein domain containing protein| Version = NM_001070963.1 GI:115481669 GeneID:4348439| Le...")
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Gene Name

Os10g0359500

Description

No apical meristem (NAM) protein domain containing protein

Version

NM_001070963.1 GI:115481669 GeneID:4348439

Length

4921 bp

Definition

Oryza sativa Japonica Group Os10g0359500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:11292740..11297660

Sequence Coding Region

11293212..11293486,11293927..11294257,11294604..11294765,11294862..11295109,11296208..11296373

Expression

GEO Profiles:Os10g0359500

Genome Context

<gbrowseImage1> name=NC_008403:11292740..11297660 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:11292740..11297660 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcttctaaagttcctgggttagcattacttaacaccagcataagcaaattttggagcgatgaggagcttgtccgattcttagcagagaggaaagaagcacactctctgccagagaatgtatttgtgggaatgaacatttctctcattgatccacgtaactcagaggacatatggtacatgaatttttcagatgatccacaatcccctaagaatggagaaaatgctattataaagtcaaaaaccggatactggaaagttgttggcactgttagaataccgacaagtactgttattgtgggtatgaaagtttctctggaccattatgaaggcgaagcaccatctggtaagagaactgggtgggtgatggatgaatatctgattgaacagaatgacgaagctaatctaccacaggactacaagaatttgtgtacaatattctttcagggagacgacatattaaatgctggagataagcagatatgtctgaatgcaaatgttcctaatgaacgcaaggaattttaccttcaatatcttgctgaactagaagagcaaaatgctgcatggagcaaccaggctgtatctgtaaacgagcaagatgtctcttccagcaaaggactggacgggcaaaaaactagtgctgctgatgaccaatctgttaatcatgccccttctagggagggctacatagaattgaatgacttcttaaactcagattcgtccgcatcaacttcggaatactcaagtcaacgcactatgatttctgaagagtacttcgattctgatgcatttctgagggagattaggaatgaccataacgcagctgatgaagaacatacagacagcaagttcagcgtagctgcagctagtaaatcagattgcgtggttatcagtccacctgaacaagggtttgttaacaatctcgataaccatgccaccatagctggagattcaccgcaaaagtcagtgaaaaatgataaagtagacgaacactcaagtgaggagcatccacagcacagtcctacaacttcctgtttcccaagtcatgtgaaacgaagcctttctagtagttccagtagctctcagggtaccagcaacagcaagtctccccagagacagagagagcgatctaccaaaaaaattggaaaattaggaaagtactggtgttgtggatcattatag</cdnaseq>

Protein Sequence

<aaseq>MSSKVPGLALLNTSISKFWSDEELVRFLAERKEAHSLPENVFVG MNISLIDPRNSEDIWYMNFSDDPQSPKNGENAIIKSKTGYWKVVGTVRIPTSTVIVGM KVSLDHYEGEAPSGKRTGWVMDEYLIEQNDEANLPQDYKNLCTIFFQGDDILNAGDKQ ICLNANVPNERKEFYLQYLAELEEQNAAWSNQAVSVNEQDVSSSKGLDGQKTSAADDQ SVNHAPSREGYIELNDFLNSDSSASTSEYSSQRTMISEEYFDSDAFLREIRNDHNAAD EEHTDSKFSVAAASKSDCVVISPPEQGFVNNLDNHATIAGDSPQKSVKNDKVDEHSSE EHPQHSPTTSCFPSHVKRSLSSSSSSSQGTSNSKSPQRQRERSTKKIGKLGKYWCCGS L</aaseq>

Gene Sequence

<dnaseqindica>4175..4449#3404..3734#2896..3057#2552..2799#1288..1453#acccgctcgcgcaattcgcacgctctcctcgcctcgcctcgccttctcttctctcctcacctcgcccgcgtcgtcgtcgtcgtcgtctccgcggcggcgggggaagcagcgggaggcggaggcggagcagcagcagcaccaccaccccggggcggggccgcggcgcggtgctcgcgcgcgtcgactccgtgtggtgcgcgaatcgtcctctccgctttactcttgggttcgtcatttcggtgggcggatgcgggtgggttggattcggtgtggttcgtggggggtggggattcggatcgggggtgattttgagagggggggatcgggttcttgattcgaggtgcgattcgggaatcgggagttggagcgggggagggggaggaatatttcgtgtggggtttgtgcgcgattctccccgtcgcttttggggtaccatccaggggacgagggagtcgtttgatatggtcgcgttcatgcttctatttttgggtggcgatctcctgtaaaatttggacccggattcggggtggttctgtttgtggtcgagttttcctcgatttgattgctgagcggaatattttgttgggtgttcttgaatttttttttttgcgtcttatgtggttgattggtttgcgattcttcattagtttatcttcgccgcgtttgtgtaaatgtgggtaatgtaaagaacaaaaaaaaaattcagggactaaaattagtgtgttctgttatggcttcagcgttgctggtctgcagctgctgcggaagtagtaatagatgaggaaatgcccaccgatttttccagattgtttgatttcttcttgccctgttgttgtggccttgataagatccggttatggctacttattttattcttttatgccgtttaaatcaattagttcatgtatctttgctgtacaaattgtgtgttatcattttgagttgtggcattttgtcagtccaagattccctgagacaacgaaccttactaatgatggcggtgagcagctactgagctctgcgtttgctttacctgatagtgcttaatttggcaattgttagctctgcatagtgctactgtacacgtggtagtgttcagttttggtaggaagagcactaaatttaagtactgctatgtatcagttatttctttcagattgtttgaccacagaacagatacgttttcatgttatcaatgcacatccttttagaaatatgccttggtatttgtatgtcaactaaagaagcatgtcggctaaaattggttctattttttccaggacaatcatgtcttctaaagttcctgggttagcattacttaacaccagcataagcaaattttggagcgatgaggagcttgtccgattcttagcagagaggaaagaagcacactctctgccagagaatgtatttgtgggaatgaacatttctctcattgatccacgtaactcaggtttgcatccaatctatacacaggataattaatggtattttccaacaagattatggcatatgtggaatttgtggtctgactttcataattcagtcattatggaccctgaaggcttctttgttttgtcctttttgatttgttatatacttactttacagcattgtattgtatggttgagcagtattgcaacattttaattctcaatagacaactaaagaaaatgaattctgcatagaattgataactatttagggttgaaaggcataaacaatattttatgcaatgccagaaagaaatattttgagctctgatgaaagtgccatgttaagtgcaggaacacatacttctgccccattgattatggcacaaattgccagcatgaagtgctcataaactatagcaggatgttatatgagaaatagtttggcacttcacattaaattgagcattttgtttttcatttttcttagcttgtgcaccaattgcttgcctgcttttgctggaaaagtatgaagtacactctttgatgattaaattctgttcactgtgttgcttggctagaacttactctgccatccttactagattctccaattatgcaaaatcattgtttccaagtgaaaattaagttttcgaagatgtcagaattcagtatatgcaattaattatcaacttttgtttttagttggagtcactatacaagcagatcatgtgcttagattttggggcttcagttcactttccacactaaaatgtgcacctaagttgttgatatgtgtctctgcactcttcagtatcccacatcataacacatagtacataaatctactggaatcatatattaataacattcttgcatgttttaaattggtaactggtgcctggtttcaataaagatttgattgcaaattttctgaggtatcagaactaaagtttactcttttttgcatagcacaagtccacagttcactgtgaccagcggtgctatatcctagagttaagctattcctacaatgaaaaccacaatggtgcttaatggcttattatcttgttaaacctcaataaaagataatctgacagagataacttttcttgcagaggacatatggtacatgaatttttcagatgatccacaatcccctaagaatggagaaaatgctattataaagtcaaaaaccggatactggaaagttgttggcactgttagaataccgacaagtactgttattgtgggtatgaaagtttctctggaccattatgaaggcgaagcaccatctggtaagagaactgggtgggtgatggatgaatatctgattgaacagaatgacgaagctaatctaccacaggtaacccatggtggttgattgatatcatttttttttctatagcatataagctttttttccagggttgttgattgatatcttttgtatttttgacaggactacaagaatttgtgtacaatattctttcagggagacgacatattaaatgctggagataagcagatatgtctgaatgcaaatgttcctaatgaacgcaaggaattttaccttcaatatcttgctgaactagaagagcaaaatgctgcatggagcaaccaggtttgtattgttttctttattatgtaaggcatccttagcaataccctggatcttttagttttgcacatattttttctcattttagtgtaaagtataccttgatccatgattgtctgtcatgtaaaattaagaaatactccagcaatcctgtcattgtaattcacttttttattttgattttgaagtatttaaggttttctccttcataaccatacaaaatctgttgtttgtgagagcatgctcctatccgatcatcatttactacttattgctttcttctgcattacaaactgtgaatatttagatgtgtgataatactaatgaatatccaatctacatatgccaggctgtatctgtaaacgagcaagatgtctcttccagcaaaggactggacgggcaaaaaactagtgctgctgatgaccaatctgttaatcatgccccttctagggagggctacatagaattgaatgacttcttaaactcagattcgtccgcatcaacttcggaatactcaagtcaacgcactatgatttctgaagagtacttcgattctgatgcatttctgagggagattaggaatgaccataacgcagctgatgaagaacatacagacagcaagttcagcgtagctgcagctagtaaatcagattgcgtggttatcagtccacctgaacaaggtaacttatcccttctgttgctagttccaaaactagaggacgctacaaatctttgtgtttgttctagaaaagtaagtgtaacaatgcaaacaaccatttcaaagtttgtaaccatgaaaatttgcaagtaaaaagcccaaatgcaatatacttcacacaaatactagaaatcgagaactgttgataatgctaattttacagctgcacttgctcatattgatatgcaatgtttatttgtttgtttcttattgctactggtgaagttcttgattagcatgcttgttcaacagtattgtttcgcatacgagtaacatgtaagttactcttgtctagagagttagatgattacttttcagctcattaacttattttatttatcttgtttatacaataatttgttagtaggatttatactgaagttggcatctctgtgcgtgcagggtttgttaacaatctcgataaccatgccaccatagctggagattcaccgcaaaagtcagtgaaaaatgataaagtagacgaacactcaagtgaggagcatccacagcacagtcctacaacttcctgtttcccaagtcatgtgaaacgaagcctttctagtagttccagtagctctcagggtaccagcaacagcaagtctccccagagacagagagagcgatctaccaaaaaaattggaaaattaggaaagtactggtgttgtggatcattatagtccattgcatagcatttctatactctgtacaggaagcatgacattacgccatgctattttgatacggactggtcgcctcaacagatttatgccagatcttctgatagaacatagtcaaagaagactgcaagttttgaagcaacaatgaccaacaatactacaaactgtggaaagttacatttttgttttgttcatagtgtgaagatatcatgaccttgatgattctgtcaaactgaagtgagctaccttgattccattcttgattgatagggtcagatattcactgatacctgtgttagttcagtgaaatgaggatggcagtagtttctgattatcaccaggtgctctcatttgtaaacatctacagtacagtttcatatgatagaatttcacattttagtaagtactaatactgattgctcaatacttagttatcctgcttgcatttgaaggagtataagcttttgattta</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0359500, RefSeq:Os10g0359500